Back [Phalaenopsis Transcriptome]
Library Name:       Contig Lists:     
Contig Information:
Project NameQuery NameLength of query
FPTEVCPMFPTEVCPM019_D05_pNDR-F665
Contig Map:
(ProjectName=FPTEVCPM
SequenceName=NoContigFind):

Sequences View:[NoContigFind](Contig Seguence)

Sequences View:[FPTEVCPM019_D05_pNDR-F](Singleton Sequence)

Contig Annotation:
GenBankAccession number
(Best hits in the GenBank)		AnnotationSpeciesLength of homologous protein(Amino Acid)ScoreExpect valueIdentitiessimilarityFrame
gbAAY41426.1 putative L24 ribosomal protein Ipomoea batatas146169 bits (428)2e-4086/106 (81%)90/106 (84%) +3

KEGG PathwayGO
NoContigFind[1 Pathway]NoContigFind[33 GoTerm]
Pathway Informations
First-level termsSecond-level termsKEGG pathway NumKEGG pathway NameKEGG pathway Description contig NamelocusNameproject Name
Genetic Information ProcessingTranslation03010Ribosome[PATH:ath03010]FPTEVCPM019_D05_pNDR-FAT3G49910FPTEVCPM

GO Informations
Locus NameGo NameGo Class DescriptionsGO idAnotations01
AT3G49910AT3G49910large ribosomal subunitGO:0015934ribosome
AT3G49910AT3G49910large ribosomal subunitGO:0015934other cytoplasmic components
AT3G49910AT3G49910large ribosomal subunitGO:0015934other intracellular components
AT3G49910AT3G49910structural constituent of ribosomeGO:0003735structural molecule activity
AT3G49910AT3G49910response to coldGO:0009409response to stress
AT3G49910AT3G49910response to coldGO:0009409response to abiotic or biotic stimulus
AT3G49910AT3G49910translationGO:0006412protein metabolism
AT3G49910AT3G49910translationGO:0006412other cellular processes
AT3G49910AT3G49910translationGO:0006412other metabolic processes
AT3G49910AT3G49910cytosolic large ribosomal subunitGO:0022625cytosol
AT3G49910AT3G49910cytosolic large ribosomal subunitGO:0022625ribosome
AT3G49910AT3G49910cytosolic large ribosomal subunitGO:0022625other cytoplasmic components
AT3G49910AT3G49910cytosolic large ribosomal subunitGO:0022625other intracellular components
AT3G49910AT3G49910cytosolic ribosomeGO:0022626cytosol
AT3G49910AT3G49910cytosolic ribosomeGO:0022626ribosome
AT3G49910AT3G49910cytosolic ribosomeGO:0022626other cytoplasmic components
AT3G49910AT3G49910cytosolic ribosomeGO:0022626other intracellular components
AT3G49910AT3G49910chloroplastGO:0009507chloroplast
AT3G49910AT3G49910membraneGO:0016020other membranes
AT3G49910AT3G49910nucleolusGO:0005730nucleus
AT3G49910AT3G49910nucleolusGO:0005730other intracellular components
AT3G49910AT3G49910nucleusGO:0005634nucleus
AT3G49910AT3G49910plasma membraneGO:0005886plasma membrane
AT3G49910AT3G49910plasma membraneGO:0005886plasma membrane
AT3G49910AT3G49910structural constituent of ribosomeGO:0003735structural molecule activity
AT3G49910AT3G49910cytosolic ribosomeGO:0022626cytosol
AT3G49910AT3G49910cytosolic ribosomeGO:0022626cytosol
AT3G49910AT3G49910cytosolic ribosomeGO:0022626ribosome
AT3G49910AT3G49910cytosolic ribosomeGO:0022626ribosome
AT3G49910AT3G49910cytosolic ribosomeGO:0022626other cytoplasmic components
AT3G49910AT3G49910cytosolic ribosomeGO:0022626other cytoplasmic components
AT3G49910AT3G49910cytosolic ribosomeGO:0022626other intracellular components
AT3G49910AT3G49910cytosolic ribosomeGO:0022626other intracellular components

Gene Network Informations
Gene NetworkInteract with..
FPTEVCPM019_D05_pNDR-F[interact with..]FPTEVCPM089_C12_PDNR-F
Contig0860
FPTEVCPM040_E01_PDNR-F
Contig1208
FPTEVCPM046_H03_PDNR-F
Contig0151
Contig0463
FPTEVCPM033_A03_PDNR-F
Contig0340
Contig0663
FPTEVCPM078_F10_PDNR-F
Contig0307
Contig0600
FPTEVCPM038_B04_PDNR-F
FPTEVCPM078_G04_PDNR-F
FPTEVCPM019_D05_pNDR-F
FPTEVCPM083_A12_PDNR-F
Query NameLength of queryGenBankAccession number(Best hits in the GenBank)AnnotationSpeciesLength of homologous protein(Amino Acid)ScoreExpect valueIdentitiessimilarityFrame
FPTEVCPM089_C12_PDNR-F426refNP_001045607.1 Os02g0103700 Oryza sativa (japonica cultivar-group)192156 bits (394)8e-3776/85 (89%)85/85 (100%) +1
Contig08601378refXP_002524302.1 60S ribosomal protein L3, putative Ricinus communis389701 bits (1810)0.0334/381 (87%)358/381 (93%) +3
FPTEVCPM040_E01_PDNR-F1018gbACF06589.1 ribosomal protein Elaeis guineensis182308 bits (790)5e-82154/183 (84%)163/183 (89%) +2
Contig1208793gbABA40430.1 ribosomal protein L27a-like protein Solanum tuberosum148253 bits (645)2e-65122/149 (81%)126/149 (84%) +2
FPTEVCPM046_H03_PDNR-F802refXP_002309256.1 predicted protein Populus trichocarpa146264 bits (675)6e-69127/149 (85%)133/149 (89%) +3
Contig0151940refXP_002531594.1 40S ribosomal protein S5, putative Ricinus communis211359 bits (922)2e-97180/211 (85%)195/211 (92%) +2
Contig0463452gbACG48499.1 40S ribosomal protein S5 Zea mays199126 bits (317)7e-2865/65 (100%)65/65 (100%) +1
FPTEVCPM033_A03_PDNR-F798refXP_002311621.1 predicted protein Populus trichocarpa133197 bits (501)1e-48102/123 (82%)107/123 (86%) +2
Contig03402301refXP_002332589.1 predicted protein Populus trichocarpa6481176 bits (3043)0.0594/648 (91%)612/648 (94%), Gaps = 1/648 (0%) +2
Contig06631030refNP_187967.1 60S ribosomal protein L7 (RPL7D) Arabidopsis thaliana244369 bits (946)e-100183/244 (75%)201/244 (82%) +3
FPTEVCPM078_F10_PDNR-F470refXP_002447060.1 hypothetical protein SORBIDRAFT_06g027780 Sorghum bicolor190109 bits (272)2e-3147/56 (83%)52/56 (92%) +3
Contig0307708spP27164.2CALM3_PETHY RecName: Full=Calmodulin-related protein184294 bits (752)6e-78147/156 (94%)150/156 (96%) +2
Contig0600693embCBI24333.1 unnamed protein product Vitis vinifera153296 bits (757)1e-78147/149 (98%)149/149 (100%) +3
FPTEVCPM038_B04_PDNR-F476spP27164.2CALM3_PETHY RecName: Full=Calmodulin-related protein184266 bits (679)7e-70133/139 (95%)134/139 (96%) +2
FPTEVCPM078_G04_PDNR-F718gbACG31089.1 calmodulin Zea mays149281 bits (719)4e-74139/142 (97%)141/142 (99%) +3
FPTEVCPM019_D05_pNDR-F665gbAAY41426.1 putative L24 ribosomal protein Ipomoea batatas146169 bits (428)2e-4086/106 (81%)90/106 (84%) +3
FPTEVCPM083_A12_PDNR-F750refXP_002284266.1 PREDICTED: hypothetical protein Vitis vinifera151226 bits (577)1e-57114/151 (75%)127/151 (84%) +2