Contig View

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Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
FPTEVCPM	Contig1208	793

Contig Map:

(ProjectName=FPTEVCPM SequenceName=Contig1208):
FPTEVCPM046_F02_PDNR-F:
FPTEVCPM085_E02_PDNR-F:

Sequences View:[Contig1208](Contig Seguence)

Sequences View:[Contig1208](Singleton Sequence)

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
gb	ABA40430.1	ribosomal protein L27a-like protein	Solanum tuberosum	148	253 bits (645)	2e-65	122/149 (81%)	126/149 (84%)	+2

KEGG Pathway	GO
Contig1208[1 Pathway]	Contig1208[18 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Genetic Information Processing	Translation	03010	Ribosome	[PATH:ath03010]	Contig1208	AT1G70600	FPTEVCPM

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT1G70600	AT1G70600	ribosome	GO:0005840	ribosome
AT1G70600	AT1G70600	structural constituent of ribosome	GO:0003735	structural molecule activity
AT1G70600	AT1G70600	translation	GO:0006412	protein metabolism
AT1G70600	AT1G70600	translation	GO:0006412	other cellular processes
AT1G70600	AT1G70600	translation	GO:0006412	other metabolic processes
AT1G70600	AT1G70600	cytosolic large ribosomal subunit	GO:0022625	cytosol
AT1G70600	AT1G70600	cytosolic large ribosomal subunit	GO:0022625	ribosome
AT1G70600	AT1G70600	cytosolic large ribosomal subunit	GO:0022625	other cytoplasmic components
AT1G70600	AT1G70600	cytosolic large ribosomal subunit	GO:0022625	other intracellular components
AT1G70600	AT1G70600	membrane	GO:0016020	other membranes
AT1G70600	AT1G70600	structural constituent of ribosome	GO:0003735	structural molecule activity
AT1G70600	AT1G70600	translation	GO:0006412	protein metabolism
AT1G70600	AT1G70600	translation	GO:0006412	other cellular processes
AT1G70600	AT1G70600	translation	GO:0006412	other metabolic processes
AT1G70600	AT1G70600	cytosolic ribosome	GO:0022626	cytosol
AT1G70600	AT1G70600	cytosolic ribosome	GO:0022626	ribosome
AT1G70600	AT1G70600	cytosolic ribosome	GO:0022626	other cytoplasmic components
AT1G70600	AT1G70600	cytosolic ribosome	GO:0022626	other intracellular components

Gene Network Informations
Gene Network	Interact with..
Contig1208[interact with..]	FPTEVCPM089_C12_PDNR-F Contig0860 FPTEVCPM040_E01_PDNR-F

Query Name	Length of query	GenBank	Accession number(Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
FPTEVCPM089_C12_PDNR-F	426	ref	NP_001045607.1	Os02g0103700	Oryza sativa (japonica cultivar-group)	192	156 bits (394)	8e-37	76/85 (89%)	85/85 (100%)	+1
Contig0860	1378	ref	XP_002524302.1	60S ribosomal protein L3, putative	Ricinus communis	389	701 bits (1810)	0.0	334/381 (87%)	358/381 (93%)	+3
FPTEVCPM040_E01_PDNR-F	1018	gb	ACF06589.1	ribosomal protein	Elaeis guineensis	182	308 bits (790)	5e-82	154/183 (84%)	163/183 (89%)	+2