Contig View

Back [Phalaenopsis Transcriptome]

Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
FPTEVCPM	FPTEVCPM078_G04_PDNR-F	718

Contig Map:

(ProjectName=FPTEVCPM
SequenceName=NoContigFind):

Sequences View:[NoContigFind](Contig Seguence)

Sequences View:[FPTEVCPM078_G04_PDNR-F](Singleton Sequence)

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
gb	ACG31089.1	calmodulin	Zea mays	149	281 bits (719)	4e-74	139/142 (97%)	141/142 (99%)	+3

KEGG Pathway	GO
NoContigFind[2 Pathway]	NoContigFind[12 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Environmental Information Processing	SignalTransduction	04070	Phosphatidylinositol signaling system	[PATH:ath04070]	FPTEVCPM078_G04_PDNR-F	AT3G43810	FPTEVCPM
Organismal Systems	Environmental Adaptation	04626	Plant-pathogen interaction	[PATH:ath04626]	FPTEVCPM078_G04_PDNR-F	AT3G43810	FPTEVCPM

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT3G43810	AT3G43810	calcium ion binding	GO:0005509	other binding
AT3G43810	AT3G43810	cellular_component	GO:0005575	unknown cellular components
AT3G43810	AT3G43810	calcium ion binding	GO:0005509	other binding
AT3G43810	AT3G43810	detection of calcium ion	GO:0005513	other biological processes
AT3G43810	AT3G43810	regulation of photomorphogenesis	GO:0010099	developmental processes
AT3G43810	AT3G43810	regulation of photomorphogenesis	GO:0010099	response to abiotic or biotic stimulus
AT3G43810	AT3G43810	calcium ion binding	GO:0005509	other binding
AT3G43810	AT3G43810	cellular_component	GO:0005575	unknown cellular components
AT3G43810	AT3G43810	calcium ion binding	GO:0005509	other binding
AT3G43810	AT3G43810	detection of calcium ion	GO:0005513	other biological processes
AT3G43810	AT3G43810	regulation of photomorphogenesis	GO:0010099	developmental processes
AT3G43810	AT3G43810	regulation of photomorphogenesis	GO:0010099	response to abiotic or biotic stimulus

Gene Network Informations
Gene Network	Interact with..
FPTEVCPM078_G04_PDNR-F[interact with..]	FPTEVCPM065_G10_PDNR-F FPTEVCPM009_A02_PDNR-F FPTEVCPM022_F11_PDNR-F FPTEVCPM068_H09_PDNR-F FPTEVCPM011_D09_PDNR-F Contig0307 Contig0600 FPTEVCPM038_B04_PDNR-F FPTEVCPM078_G04_PDNR-F FPTEVCPM001_G09_pDNR-F Contig1039 Contig1471

Query Name	Length of query	GenBank	Accession number(Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
FPTEVCPM065_G10_PDNR-F	977	ref	NP_850025.1	PFK5 (PHOSPHOFRUCTOKINASE 5); 6-phosphofructokinase	Arabidopsis thaliana	537	340 bits (871)	2e-91	156/197 (79%)	179/197 (90%)	+1
FPTEVCPM009_A02_PDNR-F	742	gb	ACC93637.1	chloroplast Cu/Zn superoxide dismutase	Gossypium hirsutum	214	267 bits (682)	8e-70	128/169 (75%)	148/169 (87%), Gaps = 1/169 (0%)	+2
FPTEVCPM022_F11_PDNR-F	1027	gb	ABA95612.2	Ubiquitin-activating enzyme E1 2, putative, expressed	Oryza sativa (japonica cultivar-group)	968	500 bits (1287)	e-139	248/341 (72%)	281/341 (82%), Gaps = 4/341 (1%)	+1
FPTEVCPM068_H09_PDNR-F	687	sp	Q9M4T8.1	PSA5_SOYBN RecName: Full=Proteasome subunit alpha type-5; AltName: Full=20S proteasome alpha subunit E; AltName: Full=20S proteasome		237	248 bits (634)	3e-64	123/129 (95%)	128/129 (99%)	+1
FPTEVCPM011_D09_PDNR-F	803	ref	NP_001151790.1	calcineurin subunit B	Zea mays	175	291 bits (744)	6e-77	144/175 (82%)	162/175 (92%)	+3
Contig0307	708	sp	P27164.2	CALM3_PETHY RecName: Full=Calmodulin-related protein		184	294 bits (752)	6e-78	147/156 (94%)	150/156 (96%)	+2
Contig0600	693	emb	CBI24333.1	unnamed protein product	Vitis vinifera	153	296 bits (757)	1e-78	147/149 (98%)	149/149 (100%)	+3
FPTEVCPM038_B04_PDNR-F	476	sp	P27164.2	CALM3_PETHY RecName: Full=Calmodulin-related protein		184	266 bits (679)	7e-70	133/139 (95%)	134/139 (96%)	+2
FPTEVCPM078_G04_PDNR-F	718	gb	ACG31089.1	calmodulin	Zea mays	149	281 bits (719)	4e-74	139/142 (97%)	141/142 (99%)	+3
FPTEVCPM001_G09_pDNR-F	685	ref	NP_001054953.1	Os05g0223000	Oryza sativa (japonica cultivar-group)	158	166 bits (420)	2e-39	83/155 (53%)	111/155 (71%), Gaps = 13/155 (8%)	+1
Contig1039	2119	ref	XP_002329963.1	predicted protein	Populus trichocarpa	698	914 bits (2363)	0.0	478/612 (78%)	496/612 (81%), Gaps = 5/612 (0%)	+1
Contig1471	1615	ref	NP_001062159.1	Os08g0500700	Oryza sativa (japonica cultivar-group)	694	572 bits (1474)	0.0	294/365 (80%)	306/365 (83%)	+3