Contig View

Back [Phalaenopsis Transcriptome]

Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
FPTEVCPM	FPTEVCPM089_C12_PDNR-F	426

Contig Map:

(ProjectName=FPTEVCPM
SequenceName=NoContigFind):

Sequences View:[NoContigFind](Contig Seguence)

Sequences View:[FPTEVCPM089_C12_PDNR-F](Singleton Sequence)

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
ref	NP_001045607.1	Os02g0103700	Oryza sativa (japonica cultivar-group)	192	156 bits (394)	8e-37	76/85 (89%)	85/85 (100%)	+1

KEGG Pathway	GO
NoContigFind[1 Pathway]	NoContigFind[21 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Genetic Information Processing	Translation	03010	Ribosome	[PATH:ath03010]	FPTEVCPM089_C12_PDNR-F	AT1G33140	FPTEVCPM

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT1G33140	AT1G33140	membrane	GO:0016020	other membranes
AT1G33140	AT1G33140	vacuole	GO:0005773	other cytoplasmic components
AT1G33140	AT1G33140	vacuole	GO:0005773	other intracellular components
AT1G33140	AT1G33140	structural constituent of ribosome	GO:0003735	structural molecule activity
AT1G33140	AT1G33140	rRNA binding	GO:0019843	DNA or RNA binding
AT1G33140	AT1G33140	chloroplast envelope	GO:0009941	plastid
AT1G33140	AT1G33140	chloroplast envelope	GO:0009941	chloroplast
AT1G33140	AT1G33140	chloroplast envelope	GO:0009941	other cytoplasmic components
AT1G33140	AT1G33140	chloroplast envelope	GO:0009941	other intracellular components
AT1G33140	AT1G33140	large ribosomal subunit	GO:0015934	ribosome
AT1G33140	AT1G33140	large ribosomal subunit	GO:0015934	other cytoplasmic components
AT1G33140	AT1G33140	large ribosomal subunit	GO:0015934	other intracellular components
AT1G33140	AT1G33140	structural constituent of ribosome	GO:0003735	structural molecule activity
AT1G33140	AT1G33140	translation	GO:0006412	protein metabolism
AT1G33140	AT1G33140	translation	GO:0006412	other cellular processes
AT1G33140	AT1G33140	translation	GO:0006412	other metabolic processes
AT1G33140	AT1G33140	adaxial/abaxial pattern formation	GO:0009955	developmental processes
AT1G33140	AT1G33140	cytosolic large ribosomal subunit	GO:0022625	cytosol
AT1G33140	AT1G33140	cytosolic large ribosomal subunit	GO:0022625	ribosome
AT1G33140	AT1G33140	cytosolic large ribosomal subunit	GO:0022625	other cytoplasmic components
AT1G33140	AT1G33140	cytosolic large ribosomal subunit	GO:0022625	other intracellular components

Gene Network Informations
Gene Network	Interact with..
FPTEVCPM089_C12_PDNR-F[interact with..]	Not found!