Back [Phalaenopsis Transcriptome]
Library Name:       Contig Lists:     
Contig Information:
Project NameQuery NameLength of query
FEICPContig2538854
Contig Map:
(ProjectName=FEICP
SequenceName=Contig2538):		GGATTCGGCCATTACGGCCGGGGAAGCCAAGAAGGCTCTGATCCTCGTTTCCCCGTCTCTCTCTCTCGACTGTGACCGACGATCGGAACATAACCGGCGGCGATGGAGTGCGTTTTTGGGCTTGTAGGTGACGGTTTCGCTTTGATCGTTGCAGACTCCTCTGCTGTTCATAGCATACTTGTCCACAAAGCTAACGAGGACAAGGTCTTGGTCCTCGACTCCCACAAGCTCCTCGGCGTCTCCGGCGAGGCAGGCGACCGGGTTCAGTTCATCGAGTACATCCAAAAGAACGTTCATCTCTACCAGTTCAGGAATGGAATCCCGCTGAGCACTGCTGCCGCTGCAAACTTCACCAGGGGCGAGCTTGCCACTGCTCTCAGAAAGAACCCATATTTTGTTAACATTCTACTGGCTGGCTATGATAAGGATATTGGACCATCTCTTTACTACATTGACTACATCGCAACTCTCCACAAGATAGACAAGGGTGCATTTGGTTATGGTTCATATTTCTCCTTAGCAATGATGGATAGGTATTTTCACAGTGGAATGTCACTGGAAGAGGCGATTGATCTCGTAGATAAATGCATTGTTGAAATCCGGTCAAGACTGGTTGTCTCTCCACCAAATTTTGTGATCAAGATTGTAGACCAGAATGGAGCAAGGGAGTATGCATGGCGTGAATCCATTTCATCGGACTAATGTATTTCTGAATTAGTGTTATGATCCGGACTCAAGTACTGTTTTTGAAGTTAATTGCTGTACTTTTCTTATTTATGCTGTTTGTGATGAAATTATATTTGATTAAGGAAATTTTCTCTTAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
EICPS026_H01_pDNR-F:GGATTCGGCCATTACGGCCGGGGAAGCCAAGAAGGCTCTGATCCTCGTTTCCCCGTCTCTCTCTCTCGACTGTGACCGACGATCGGAACATAACCGGCGGCGATGGAGTGCGTTTTTGGGCTTGTAGGTGACGGTTTCGCTTTGATCGTTGCAGACTCCTCTGCTGTTCATAGCATACTTGTCCACAAAGCTAACGAGGACAAGGTCTTGGTCCTCGACTCCCACAAGCTCCTCGGCGTCTCCGGCGAGGCAGGCGACCGGGTTCAGTTCATCGAGTACATCCAAAAGAACGTTCATCTCTACCAGTTCAGGAATGGAATCCCGCTGAGCACTGCTGCCGCTGCAAACTTCACCAGGGGCGAGCTTGCCACTGCTCTCAGAAAGAACCCATATTTTGTTAACATTCTACTGGCTGGCTATGATAAGGATATTGGACCATCTCTTTACTACATTGACTACATCGCAACTCTCCACAAGATAGACAAGGGTGCATTTGGTTATGGTTCATATTTCTCCTTAGCAATGATGGATAGGTATTTTCACAGTGGAATGTCACTGGAAGAGGCGATTGATCTCGTAGATAAATGCATTGTTGAAATCCGGTCAAGACTGGTTGTCTCTCCACCAAATTTTGTGATCAAGATTGTAGACCAGAATGGAGCAAGGGAGTATGCATGGCGTGAATCCATTTCATCGGACTAATGTATTTCTGAATTAGTGTTATGATCCGGACTCAAGTACTGTTTTTGAAGTTAATTGCTGTACTTTTCTTATTTATGCTGTTTGTGATGAAATTATATTTGATTAAGGAAATTTTCTCTTAGAAAAAAAAAAAAAAAAAAAAAAAAAA
EICPS032_A09_pDNR-F:GGATTCGGCCATTACGGCCGGGGAAGCCAAGAAGGCTCTGATCCTCGTTTCCCCGTCTCTCTCTCTCGACTGTGACCGACGATCGGAACATAACCGGCGGCGATGGAGTGCGTTTTTGGGCTTGTAGGTGACGGTTTCGCTTTGATCGTTGCAGACTCCTCTGCTGTTCATAGCATACTTGTCCACAAAGCTAACGAGGACAAGGTCTTGGTCCTCGACTCCCACAAGCTCCTCGGCGTCTCCGGCGAGGCAGGCGACCGGGTTCAGTTCATCGAGTACATCCAAAAGAACGTTCATCTCTACCAGTTCAGGAATGGAATCCCGCTGAGCACTGCTGCCGCTGCAAACTTCACCAGGGGCGAGCTTGCCACTGCTCTCAGAAAGAACCCATATTTTGTTAACATTCTACTGGCTGGCTATGATAAGGATATTGGACCATCTCTTTACTACATTGACTACATCGCAACTCTCCACAAGATAGACAAGGGTGCATTTGGTTATGGTTCATATTTCTCCTTAGCAATGATGGATAGGTATTTTCACAGTGGAATGTCACTGGAAGAGGCGATTGATCTCGTAGATAAATGCATTGTTGAAATCCGGTCAAGACTGGTTGTCTCTCCACCAAATTTTGTGATCAAGATTGTAGACCAGAATGGAGCAAGGGAGTATGCATGGCGTGAATCCATTTCATCGGACTAATGTATTTCTGAATTAGTGTTATGATCCGGACTCAAGTACTGTTTTTGAAGTTAATTGCTGTACTTTTCTTATTTATGCTGTTTGTGATGAAATTATATTTGATTAAGGAAATTTTCTCTTAGAAAAAAAAAAAAAAAAAAAAAAAAAAAA
EICPS026-H01_pPDNR-R:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTAAAAAAAAATTTCCTTAATAAAATATAATTTCATCACAAACAGCATAAATAAAAAAAGTACAGCAATTAACTTCAAAAACAGTACTTGAGTCCGGATCATAACACTAATTCAAAAATACATTAGTCCGATGAAATGGATTCACGCCATGCATACTCCCTTGCTCCATTCTGGTCTACAATCTTGATCACAAAATTTGGGGGAGAGACAACCAGTCTTGACCGGATTTCAACAATGCATTTATCTACGAAATCAATCGCCTTTTCCAGGGACATTCCACTGGGAAAATACCTATCCATCATTGCTAAGGAAAAATATGAACCATAACCAAATGCCCCCTTGTCTATCTTGGGGAGAGTTGCGATGTAGTCAATGTAGTAAAGAGATGGTCCAATATCCTTATCATAGCCAGCCAGTAAAATGTTAACAAAATATGGGTTCTTTCTGAAAGCAGGGGCAAGCTCGCCCCTGGTGAAGTTTGCAGCGGCAGCAGTGCTCAGCGGGATTCCATTCCTGAACTGGTAGAGATGAACGTTCTTTTGGATGTACTCGATGAACTGAACCCGGTCGCCTGCCTCGCCGGAGACGCCGAGGAGCTTGTGGGAGTCGAGGACCAAGACCTTGTCCTCGTTAGCTTTGTGGACAAGTATGCTATGAACAGCAGAGGAGTCTGCAACGATCAAAGCGAAACCGTCACCTACAAGCCCAAAAACGCACTCCATCGCCGCCGGTTATGTTCCGATCGTCGGTCACAGTCGAGAGAGAGAGACGGGGAAACGAGGATCAGAGCCTTCTTGGCTC

Sequences View:[Contig2538](Contig Seguence)

Sequences View:[Contig2538](Singleton Sequence)

Contig Annotation:
GenBankAccession number
(Best hits in the GenBank)		AnnotationSpeciesLength of homologous protein(Amino Acid)ScoreExpect valueIdentitiessimilarityFrame
refXP_002517100.1 proteasome subunit beta type, putative Ricinus communis202352 bits (902)3e-95169/196 (86%)187/196 (95%) +1

KEGG PathwayGO
Contig2538[1 Pathway]Contig2538[12 GoTerm]
Pathway Informations
First-level termsSecond-level termsKEGG pathway NumKEGG pathway NameKEGG pathway Description contig NamelocusNameproject Name
Genetic Information ProcessingFolding, Sorting and Degradation03050Proteasome[PATH:ath03050]Contig2538AT3G22630FEICP

GO Informations
Locus NameGo NameGo Class DescriptionsGO idAnotations01
AT3G22630AT3G22630plasma membraneGO:0005886plasma membrane
AT3G22630AT3G22630plasma membraneGO:0005886plasma membrane
AT3G22630AT3G22630vacuoleGO:0005773other cytoplasmic components
AT3G22630AT3G22630vacuoleGO:0005773other intracellular components
AT3G22630AT3G22630apoplastGO:0048046extracellular
AT3G22630AT3G22630proteasome core complexGO:0005839other intracellular components
AT3G22630AT3G22630proteasome core complexGO:0005839other intracellular components
AT3G22630AT3G22630peptidase activityGO:0008233hydrolase activity
AT3G22630AT3G22630ubiquitin-dependent protein catabolic processGO:0006511protein metabolism
AT3G22630AT3G22630ubiquitin-dependent protein catabolic processGO:0006511other cellular processes
AT3G22630AT3G22630ubiquitin-dependent protein catabolic processGO:0006511other metabolic processes
AT3G22630AT3G22630proteasome complexGO:0000502other intracellular components

Gene Network Informations
Gene NetworkInteract with..
Contig2538[interact with..]Contig3110
Contig1958
EICPS043_C12_pDNR-F
Contig2599
EICPM038_F05_pDNR-F
EICPS043_E03_pDNR-F
Contig4355
Contig2822
EICPM018-B01_pDNR-R
Contig1919
Contig2538
Contig3420
Contig3840
Query NameLength of queryGenBankAccession number(Best hits in the GenBank)AnnotationSpeciesLength of homologous protein(Amino Acid)ScoreExpect valueIdentitiessimilarityFrame
Contig31101030gbACU16597.1 unknown Glycine max212279 bits (714)3e-73145/189 (76%)150/189 (79%) +2
Contig1958831refXP_002532653.1 ubiquitin-conjugating enzyme E2, putative Ricinus communis148308 bits (790)3e-82146/148 (98%)146/148 (98%) +3
EICPS043_C12_pDNR-F814gbACB87920.1 ubiquitin conjugating enzyme 2 Malus x domestica148310 bits (795)9e-83146/148 (98%)148/148 (100%) +2
Contig25991085refXP_002513374.1 proteasome subunit alpha type, putative Ricinus communis235426 bits (1095)e-117217/235 (92%)225/235 (95%) +3
EICPM038_F05_pDNR-F1034refXP_002278126.1 PREDICTED: hypothetical protein Vitis vinifera235402 bits (1032)e-112204/220 (92%)212/220 (96%) +3
EICPS043_E03_pDNR-F747refXP_002513374.1 proteasome subunit alpha type, putative Ricinus communis235291 bits (745)5e-77145/159 (91%)152/159 (95%) +1
Contig43551036spQ9XG77.1PSA6_TOBAC RecName: Full=Proteasome subunit alpha type-6; AltName: Full=20S proteasome alpha subunit A; AltName: Full=20S proteasome246461 bits (1186)e-128224/246 (91%)243/246 (98%) +1
Contig28221047embCAC43323.1 putative alpha7 proteasome subunit Nicotiana tabacum249435 bits (1119)e-120212/228 (92%)221/228 (96%) +2
EICPM018-B01_pDNR-R851refNP_001055904.1 Os05g0490800 Oryza sativa (japonica cultivar-group)27679.0 bits (193)6e-2353/133 (39%)70/133 (52%), Gaps = 27/133 (20%) +3
Contig19191702refNP_001049673.1 Os03g0268400 Oryza sativa (japonica cultivar-group)361658 bits (1698)0.0326/361 (90%)346/361 (95%) +1
Contig2538854refXP_002517100.1 proteasome subunit beta type, putative Ricinus communis202352 bits (902)3e-95169/196 (86%)187/196 (95%) +1
Contig34201002refXP_002527995.1 proteasome subunit beta type 6,9, putative Ricinus communis231394 bits (1012)e-108198/231 (85%)211/231 (91%) +1
Contig38401429refXP_002302444.1 predicted protein Populus trichocarpa309524 bits (1350)e-147270/309 (87%)275/309 (88%), Gaps = 1/309 (0%) +1