Back [Phalaenopsis Transcriptome]
Library Name:       Contig Lists:     
Contig Information:
Project NameQuery NameLength of query
FEICPEICPS034_G03_pDNR-F782

Contig Map:
(ProjectName=FEICP
SequenceName=NoContigFind):

Sequences View:[NoContigFind](Contig Seguence)


Sequences View:[EICPS034_G03_pDNR-F](Singleton Sequence)

Contig Annotation:
GenBankAccession number
(Best hits in the GenBank)
AnnotationSpeciesLength of homologous protein(Amino Acid)ScoreExpect valueIdentitiessimilarityFrame
gbACF06501.1 SKP1 Elaeis guineensis163221 bits (562)8e-56114/158 (72%)122/158 (77%), Gaps = 2/158 (1%) +3

KEGG PathwayGO
NoContigFind[2 Pathway]NoContigFind[30 GoTerm]
Pathway Informations
First-level termsSecond-level termsKEGG pathway NumKEGG pathway NameKEGG pathway Description contig NamelocusNameproject Name
Genetic Information ProcessingFolding, Sorting and Degradation04141Protein processing in endoplasmic reticulum[PATH:ath04141]EICPS034_G03_pDNR-FAT5G42190FEICP
Genetic Information ProcessingFolding, Sorting and Degradation04120Ubiquitin mediated proteolysis[PATH:ath04120]EICPS034_G03_pDNR-FAT5G42190FEICP

GO Informations
Locus NameGo NameGo Class DescriptionsGO idAnotations01
AT5G42190AT5G42190cytoplasmGO:0005737other cytoplasmic components
AT5G42190AT5G42190protein bindingGO:0005515protein binding
AT5G42190AT5G42190protein bindingGO:0005515protein binding
AT5G42190AT5G42190protein bindingGO:0005515protein binding
AT5G42190AT5G42190protein bindingGO:0005515protein binding
AT5G42190AT5G42190protein bindingGO:0005515protein binding
AT5G42190AT5G42190protein bindingGO:0005515protein binding
AT5G42190AT5G42190protein bindingGO:0005515protein binding
AT5G42190AT5G42190protein bindingGO:0005515protein binding
AT5G42190AT5G42190ubiquitin-protein ligase activityGO:0004842other enzyme activity
AT5G42190AT5G42190ubiquitin-dependent protein catabolic processGO:0006511protein metabolism
AT5G42190AT5G42190ubiquitin-dependent protein catabolic processGO:0006511other cellular processes
AT5G42190AT5G42190ubiquitin-dependent protein catabolic processGO:0006511other metabolic processes
AT5G42190AT5G42190SCF ubiquitin ligase complexGO:0019005other intracellular components
AT5G42190AT5G42190embryo development ending in seed dormancyGO:0009793developmental processes
AT5G42190AT5G42190cytoplasmGO:0005737other cytoplasmic components
AT5G42190AT5G42190protein bindingGO:0005515protein binding
AT5G42190AT5G42190protein bindingGO:0005515protein binding
AT5G42190AT5G42190protein bindingGO:0005515protein binding
AT5G42190AT5G42190protein bindingGO:0005515protein binding
AT5G42190AT5G42190protein bindingGO:0005515protein binding
AT5G42190AT5G42190protein bindingGO:0005515protein binding
AT5G42190AT5G42190protein bindingGO:0005515protein binding
AT5G42190AT5G42190protein bindingGO:0005515protein binding
AT5G42190AT5G42190ubiquitin-protein ligase activityGO:0004842other enzyme activity
AT5G42190AT5G42190ubiquitin-dependent protein catabolic processGO:0006511protein metabolism
AT5G42190AT5G42190ubiquitin-dependent protein catabolic processGO:0006511other cellular processes
AT5G42190AT5G42190ubiquitin-dependent protein catabolic processGO:0006511other metabolic processes
AT5G42190AT5G42190SCF ubiquitin ligase complexGO:0019005other intracellular components
AT5G42190AT5G42190embryo development ending in seed dormancyGO:0009793developmental processes

Gene Network Informations
Gene NetworkInteract with..
EICPS034_G03_pDNR-F[interact with..]EICPS035_B05_pDNR-F
Contig2432
EICPS025-H12_pPDNR-R
Contig2744
EICPM032-G11_pDNR-R
EICPS029_C08_pDNR-F
EICPS016_B07_pDNR-F
Contig3593
Contig1908
Contig2892
Contig2784
EICPM039_A05_pDNR-F
EICPS010_F02_pDNR-F
EICPS021_E01_pDNR-F
EICPS033_B01_pDNR-F
EICPS042_G12_pDNR-F
EICPM020_F07_pDNR-F
EICPM022_E01_pDNR-F
Contig3203
EICPM046-G06_pDNR-R
EICPS037_E03_pDNR-F
EICPS049-F07_pPDNR-R
Contig3728
EICPS006_F07_PDNR-F
EICPS018_G04_PDNR-F
Contig3023
EICPM051-G03_pDNR-R
EICPS012_A01_pDNR-F
Contig3685
EICPS050_H07_pDNR-F
Contig2000
Contig4565
EICPM023_F05_pDNR-F
EICPS013_F02_pDNR-F
EICPS034_G03_pDNR-F
Query NameLength of queryGenBankAccession number(Best hits in the GenBank)AnnotationSpeciesLength of homologous protein(Amino Acid)ScoreExpect valueIdentitiessimilarityFrame
EICPS035_B05_pDNR-F685embCBI26833.1 unnamed protein product Vitis vinifera753169 bits (428)2e-4084/151 (55%)108/151 (71%) +1
Contig2432974refXP_002510577.1 skp1, putative Ricinus communis157212 bits (539)5e-53107/155 (69%)125/155 (80%), Gaps = 8/155 (5%) +2
EICPS025-H12_pPDNR-R783refXP_002510577.1 skp1, putative Ricinus communis157196 bits (497)3e-48100/155 (64%)117/155 (75%), Gaps = 8/155 (5%) +2
Contig27441530gbACJ11718.1 phosphoglycerate kinase Gossypium hirsutum401647 bits (1669)0.0332/401 (82%)356/401 (88%) +3
EICPM032-G11_pDNR-R1049embCBI24183.1 unnamed protein product Vitis vinifera349276 bits (707)6e-73141/197 (71%)157/197 (79%) +1
EICPS029_C08_pDNR-F936refXP_002513352.1 phosphoglycerate kinase, putative Ricinus communis40189.4 bits (220)6e-2544/62 (70%)50/62 (80%) -3
EICPS016_B07_pDNR-F787embCBI23666.1 unnamed protein product Vitis vinifera22083.6 bits (205)2e-1450/109 (45%)62/109 (56%) +2
Contig3593994refXP_002531594.1 40S ribosomal protein S5, putative Ricinus communis211359 bits (922)2e-97180/211 (85%)195/211 (92%) +3
Contig1908791gbACF06479.1 ubiquitin extension protein-like protein Elaeis guineensis156247 bits (631)8e-64125/154 (81%)128/154 (83%) +3
Contig2892845gbACF06479.1 ubiquitin extension protein-like protein Elaeis guineensis156247 bits (631)9e-64125/154 (81%)128/154 (83%) +2
Contig27841512refXP_002332589.1 predicted protein Populus trichocarpa648730 bits (1884)0.0369/409 (90%)378/409 (92%), Gaps = 1/409 (0%) +2
EICPM039_A05_pDNR-F1034gbACJ11740.1 heat shock protein 70 Gossypium hirsutum647486 bits (1252)e-139248/263 (94%)251/263 (95%) +1
EICPS010_F02_pDNR-F752gbAAF34134.1 high molecular weight heat shock protein Malus x domestica650280 bits (715)1e-73143/169 (84%)148/169 (87%), Gaps = 3/169 (1%) +3
EICPS021_E01_pDNR-F712refXP_002332589.1 predicted protein Populus trichocarpa648228 bits (582)3e-58112/124 (90%)118/124 (95%), Gaps = 1/124 (0%) +3
EICPS033_B01_pDNR-F1050refXP_002332589.1 predicted protein Populus trichocarpa648282 bits (721)3e-75139/153 (90%)147/153 (96%), Gaps = 1/153 (0%) +2
EICPS042_G12_pDNR-F768gbAAF34134.1 high molecular weight heat shock protein Malus x domestica650289 bits (740)2e-76148/173 (85%)152/173 (87%), Gaps = 3/173 (1%) +2
EICPM020_F07_pDNR-F938refXP_002519309.1 s-adenosylmethionine synthetase, putative Ricinus communis393397 bits (1019)e-108196/223 (87%)205/223 (91%) +3
EICPM022_E01_pDNR-F1012refXP_002523036.1 ATP synthase subunit d, putative Ricinus communis261389 bits (998)e-106209/258 (81%)222/258 (86%) +3
Contig3203669embCBI21255.1 unnamed protein product Vitis vinifera160154 bits (389)6e-3672/95 (75%)81/95 (85%) +2
EICPM046-G06_pDNR-R1102refXP_002512685.1 40S ribosomal protein S27, putative Ricinus communis86141 bits (355)1e-3168/86 (79%)70/86 (81%) +3
EICPS037_E03_pDNR-F594refXP_002512685.1 40S ribosomal protein S27, putative Ricinus communis86152 bits (384)2e-3572/86 (83%)74/86 (86%) +1
EICPS049-F07_pPDNR-R606refXP_002512685.1 40S ribosomal protein S27, putative Ricinus communis86148 bits (374)3e-3470/86 (81%)72/86 (83%) +2
Contig37281063embCBI15705.1 unnamed protein product Vitis vinifera300377 bits (968)e-102190/237 (80%)195/237 (82%) +2
EICPS006_F07_PDNR-F926gbACG47588.1 60S ribosomal protein L7a Zea mays255371 bits (952)e-101183/210 (87%)191/210 (90%) -1
EICPS018_G04_PDNR-F776gbACG39857.1 deaminase Zea mays383162 bits (409)4e-3874/121 (61%)97/121 (80%) +3
Contig30231341dbjBAA93051.1 cysteine synthase Allium tuberosum325506 bits (1304)e-141259/325 (79%)278/325 (85%) +3
EICPM051-G03_pDNR-R1068dbjBAA93051.1 cysteine synthase Allium tuberosum325228 bits (580)1e-61123/189 (65%)131/189 (69%) +1
EICPS012_A01_pDNR-F651gbABF98562.1 Splicing factor 3A subunit 3, putative, expressed Oryza sativa (japonica cultivar-group)378276 bits (707)8e-73121/127 (95%)127/127 (100%) +2
Contig36851011gbACF06617.1 40S ribosomal protein S8 Elaeis guineensis224288 bits (737)3e-76147/184 (79%)151/184 (82%) +2
EICPS050_H07_pDNR-F647refXP_002326127.1 predicted protein Populus trichocarpa117217 bits (552)7e-5596/117 (82%)102/117 (87%) +3
Contig20001143embCBI25704.1 unnamed protein product Vitis vinifera518551 bits (1421)e-155273/314 (86%)299/314 (95%) +2
Contig45651510refXP_002325862.1 predicted protein Populus trichocarpa353580 bits (1496)e-163281/354 (79%)319/354 (90%) +1
EICPM023_F05_pDNR-F1072refNP_001055097.1 Os05g0289400 Oryza sativa (japonica cultivar-group)723465 bits (1197)e-129222/302 (73%)260/302 (86%) +2
EICPS013_F02_pDNR-F797gbACB87913.1 SKP1-like protein 1 Malus x domestica156242 bits (617)3e-62122/162 (75%)130/162 (80%) +3
EICPS034_G03_pDNR-F782gbACF06501.1 SKP1 Elaeis guineensis163221 bits (562)8e-56114/158 (72%)122/158 (77%), Gaps = 2/158 (1%) +3