Contig View

Back [Phalaenopsis Transcriptome]

Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
FEICP	Contig3023	1341

Contig Map:

(ProjectName=FEICP SequenceName=Contig3023):
EICPM051_G03_pDNR-F:
EICPM051-G03_pDNR-R:
EICPM040_G03_pDNR-F:

Sequences View:[Contig3023](Contig Seguence)

1341 bases 
GGCTGCATTCTGTTCTGGATAAAGATCAAGAGGTTTCTGTAAAAGGAGCTGCCTTTTACTATTTTTCCCAGCTTCAGTGATTATTCTACAGTGATTTTGGTGTGTTTTGAAAGCAAGAAGGCTGAACAATGGCTGAATTAGAACCAAGTATTGCAAAGGATGTCACTGAATTGATTGGTAAAACTCCATTGGTTTATCTCAACACTCTTACTGTTGACTGCCATGCTCGTGTCGCTGCTAAACTAGAGATGATGGAGCCATGCTCTAGCGTCAAGGATAGGATTGGATATAGCATGATTACTGATGCAGAGGAGAAGGGTCATATAGCTCCTGGAAAGAGCGTCCTTATTGAGCCTACCAGTGGCAACACTGGTATTGGATTGGCATTCATGGCCGCCGCTAAGGGGTATAAGCTCGTGCTCACAATGCCGGCTTCTATGAGCCTTGAGAGAAGGATCATTCTTAAAGCTTTTGGTGCCGAGTTGGTCCTCACCGACCCGGTTTTAGGCATGAAAGGCGCCGTTCAGAAGGCGGAAGAGTTGGCGGCGAAGACTCCCAATTCTTACATTCTCCAGCAATTCGAGAATCCTTCCAACCCGAAGATTCATTATGAGACAACTGGGCCTGAGATTTGGAAAGGAACTGGTGGGAAAATTGATGCATTGGTCTCTGGAATTGGAACTGGTGGGACAATTACAGGTGCAGGGAAATATCTGAAAGAGCAGAATCCTCATATTAAGCTATATGGCGTGGAACCGGTCGAAAGCGCAGTTTTATCCGGCGGAAAGCCAGGCCCTCACAAGATACAGGGAATTGGGGCTGGATTTGTACCTGGAGTTTTGGATGTTGATCTTCTTGATGAAGTAGTGCAGATCTCAAGCGAAGAGGCCATTGAGACTGCAAAGCTTCTTGCATTGAAAGAGGGGTTGCTGGTTGGAATATCATCTGGAGCTGCTGCTGCTGCTGCTATCAAGGTGGCACAGAGGCCAGAGAATGAAGGAAAACTGATTGTCGTGGTTTTCCCAAGCTTTGGTGAGCGTTACCTCTCCTCTGTGCTCTTCCAGTCTATAAAGAAGGAAGCTGAAAGCATGATTTTTGAGCCTTGAATGTGACTTATGTTTTCTACAAATAAAGAAGCATTTCATGATAAATTTATGCAAGATTTGCTTTTGCTTGTTTTTGCTTTATAATTAGAATAAATGCATGTGAAAAACTCTCTTCTTCTTTCTCTCACATCTTCAGCAGAGGTACTTTTGTAATTTGAAGTTTTCATTTTCTTGAGATAGTGTATGCTGCATCTACTTCTATTTTGATGAAAAAAAAAAAAAAAAAAAAAAAAAA

Sequences View:[Contig3023](Singleton Sequence)

Contig3023 1341  bases 
GGCTGCATTCTGTTCTGGATAAAGATCAAGAGGTTTCTGTAAAAGGAGCTGCCTTTTACTATTTTTCCCAGCTTCAGTGATTATTCTACAGTGATTTTGGTGTGTTTTGAAAGCAAGAAGGCTGAACAATGGCTGAATTAGAACCAAGTATTGCAAAGGATGTCACTGAATTGATTGGTAAAACTCCATTGGTTTATCTCAACACTCTTACTGTTGACTGCCATGCTCGTGTCGCTGCTAAACTAGAGATGATGGAGCCATGCTCTAGCGTCAAGGATAGGATTGGATATAGCATGATTACTGATGCAGAGGAGAAGGGTCATATAGCTCCTGGAAAGAGCGTCCTTATTGAGCCTACCAGTGGCAACACTGGTATTGGATTGGCATTCATGGCCGCCGCTAAGGGGTATAAGCTCGTGCTCACAATGCCGGCTTCTATGAGCCTTGAGAGAAGGATCATTCTTAAAGCTTTTGGTGCCGAGTTGGTCCTCACCGACCCGGTTTTAGGCATGAAAGGCGCCGTTCAGAAGGCGGAAGAGTTGGCGGCGAAGACTCCCAATTCTTACATTCTCCAGCAATTCGAGAATCCTTCCAACCCGAAGATTCATTATGAGACAACTGGGCCTGAGATTTGGAAAGGAACTGGTGGGAAAATTGATGCATTGGTCTCTGGAATTGGAACTGGTGGGACAATTACAGGTGCAGGGAAATATCTGAAAGAGCAGAATCCTCATATTAAGCTATATGGCGTGGAACCGGTCGAAAGCGCAGTTTTATCCGGCGGAAAGCCAGGCCCTCACAAGATACAGGGAATTGGGGCTGGATTTGTACCTGGAGTTTTGGATGTTGATCTTCTTGATGAAGTAGTGCAGATCTCAAGCGAAGAGGCCATTGAGACTGCAAAGCTTCTTGCATTGAAAGAGGGGTTGCTGGTTGGAATATCATCTGGAGCTGCTGCTGCTGCTGCTATCAAGGTGGCACAGAGGCCAGAGAATGAAGGAAAACTGATTGTCGTGGTTTTCCCAAGCTTTGGTGAGCGTTACCTCTCCTCTGTGCTCTTCCAGTCTATAAAGAAGGAAGCTGAAAGCATGATTTTTGAGCCTTGAATGTGACTTATGTTTTCTACAAATAAAGAAGCATTTCATGATAAATTTATGCAAGATTTGCTTTTGCTTGTTTTTGCTTTATAATTAGAATAAATGCATGTGAAAAACTCTCTTCTTCTTTCTCTCACATCTTCAGCAGAGGTACTTTTGTAATTTGAAGTTTTCATTTTCTTGAGATAGTGTATGCTGCATCTACTTCTATTTTGATGAAAAAAAAAAAAAAAAAAAAAAAAAA

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
dbj	BAA93051.1	cysteine synthase	Allium tuberosum	325	506 bits (1304)	e-141	259/325 (79%)	278/325 (85%)	+3

KEGG Pathway	GO
Contig3023[3 Pathway]	Contig3023[124 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Metabolism	Amino Acid Metabolism	00270	Cysteine and methionine metabolism	[PATH:ath00270]	Contig3023	AT4G14880	FEICP
Metabolism	Energy Metabolism	00920	Sulfur metabolism	[PATH:ath00920]	Contig3023	AT4G14880	FEICP
Metabolism	Metabolism of Other Amino Acids	00450	Selenocompound metabolism	[PATH:ath00450]	Contig3023	AT4G14880	FEICP

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT4G14880	AT4G14880	chloroplast	GO:0009507	chloroplast
AT4G14880	AT4G14880	membrane	GO:0016020	other membranes
AT4G14880	AT4G14880	nucleus	GO:0005634	nucleus
AT4G14880	AT4G14880	peroxisome	GO:0005777	other cytoplasmic components
AT4G14880	AT4G14880	peroxisome	GO:0005777	other intracellular components
AT4G14880	AT4G14880	plasma membrane	GO:0005886	plasma membrane
AT4G14880	AT4G14880	plasma membrane	GO:0005886	plasma membrane
AT4G14880	AT4G14880	apoplast	GO:0048046	extracellular
AT4G14880	AT4G14880	cytosol	GO:0005829	cytosol
AT4G14880	AT4G14880	peroxisome	GO:0005777	other cytoplasmic components
AT4G14880	AT4G14880	peroxisome	GO:0005777	other intracellular components
AT4G14880	AT4G14880	cysteine synthase activity	GO:0004124	other enzyme activity
AT4G14880	AT4G14880	cysteine synthase activity	GO:0004124	other enzyme activity
AT4G14880	AT4G14880	protein binding	GO:0005515	protein binding
AT4G14880	AT4G14880	aging	GO:0007568	other biological processes
AT4G14880	AT4G14880	cysteine biosynthetic process from serine	GO:0006535	other cellular processes
AT4G14880	AT4G14880	cysteine biosynthetic process from serine	GO:0006535	other metabolic processes
AT4G14880	AT4G14880	cysteine biosynthetic process	GO:0019344	other cellular processes
AT4G14880	AT4G14880	cysteine biosynthetic process	GO:0019344	other metabolic processes
AT4G14880	AT4G14880	response to cadmium ion	GO:0046686	other biological processes
AT4G14880	AT4G14880	response to cadmium ion	GO:0046686	other biological processes
AT4G14880	AT4G14880	response to cadmium ion	GO:0046686	other biological processes
AT4G14880	AT4G14880	response to cadmium ion	GO:0046686	other biological processes
AT4G14880	AT4G14880	chloroplast	GO:0009507	chloroplast
AT4G14880	AT4G14880	membrane	GO:0016020	other membranes
AT4G14880	AT4G14880	nucleus	GO:0005634	nucleus
AT4G14880	AT4G14880	peroxisome	GO:0005777	other cytoplasmic components
AT4G14880	AT4G14880	peroxisome	GO:0005777	other intracellular components
AT4G14880	AT4G14880	plasma membrane	GO:0005886	plasma membrane
AT4G14880	AT4G14880	plasma membrane	GO:0005886	plasma membrane
AT4G14880	AT4G14880	apoplast	GO:0048046	extracellular
AT4G14880	AT4G14880	chloroplast	GO:0009507	chloroplast
AT4G14880	AT4G14880	membrane	GO:0016020	other membranes
AT4G14880	AT4G14880	nucleus	GO:0005634	nucleus
AT4G14880	AT4G14880	peroxisome	GO:0005777	other cytoplasmic components
AT4G14880	AT4G14880	peroxisome	GO:0005777	other intracellular components
AT4G14880	AT4G14880	plasma membrane	GO:0005886	plasma membrane
AT4G14880	AT4G14880	plasma membrane	GO:0005886	plasma membrane
AT4G14880	AT4G14880	apoplast	GO:0048046	extracellular
AT4G14880	AT4G14880	cytosol	GO:0005829	cytosol
AT4G14880	AT4G14880	peroxisome	GO:0005777	other cytoplasmic components
AT4G14880	AT4G14880	peroxisome	GO:0005777	other intracellular components
AT4G14880	AT4G14880	cysteine synthase activity	GO:0004124	other enzyme activity
AT4G14880	AT4G14880	cysteine synthase activity	GO:0004124	other enzyme activity
AT4G14880	AT4G14880	protein binding	GO:0005515	protein binding
AT4G14880	AT4G14880	aging	GO:0007568	other biological processes
AT4G14880	AT4G14880	cysteine biosynthetic process from serine	GO:0006535	other cellular processes
AT4G14880	AT4G14880	cysteine biosynthetic process from serine	GO:0006535	other metabolic processes
AT4G14880	AT4G14880	cysteine biosynthetic process	GO:0019344	other cellular processes
AT4G14880	AT4G14880	cysteine biosynthetic process	GO:0019344	other metabolic processes
AT4G14880	AT4G14880	response to cadmium ion	GO:0046686	other biological processes
AT4G14880	AT4G14880	response to cadmium ion	GO:0046686	other biological processes
AT4G14880	AT4G14880	response to cadmium ion	GO:0046686	other biological processes
AT4G14880	AT4G14880	chloroplast	GO:0009507	chloroplast
AT4G14880	AT4G14880	membrane	GO:0016020	other membranes
AT4G14880	AT4G14880	nucleus	GO:0005634	nucleus
AT4G14880	AT4G14880	peroxisome	GO:0005777	other cytoplasmic components
AT4G14880	AT4G14880	peroxisome	GO:0005777	other intracellular components
AT4G14880	AT4G14880	plasma membrane	GO:0005886	plasma membrane
AT4G14880	AT4G14880	plasma membrane	GO:0005886	plasma membrane
AT4G14880	AT4G14880	apoplast	GO:0048046	extracellular
AT4G14880	AT4G14880	cytosol	GO:0005829	cytosol
AT4G14880	AT4G14880	peroxisome	GO:0005777	other cytoplasmic components
AT4G14880	AT4G14880	peroxisome	GO:0005777	other intracellular components
AT4G14880	AT4G14880	cysteine synthase activity	GO:0004124	other enzyme activity
AT4G14880	AT4G14880	cysteine synthase activity	GO:0004124	other enzyme activity
AT4G14880	AT4G14880	protein binding	GO:0005515	protein binding
AT4G14880	AT4G14880	aging	GO:0007568	other biological processes
AT4G14880	AT4G14880	cysteine biosynthetic process from serine	GO:0006535	other cellular processes
AT4G14880	AT4G14880	cysteine biosynthetic process from serine	GO:0006535	other metabolic processes
AT4G14880	AT4G14880	cysteine biosynthetic process	GO:0019344	other cellular processes
AT4G14880	AT4G14880	cysteine biosynthetic process	GO:0019344	other metabolic processes
AT4G14880	AT4G14880	response to cadmium ion	GO:0046686	other biological processes
AT4G14880	AT4G14880	response to cadmium ion	GO:0046686	other biological processes
AT4G14880	AT4G14880	response to cadmium ion	GO:0046686	other biological processes
AT4G14880	AT4G14880	response to cadmium ion	GO:0046686	other biological processes
AT4G14880	AT4G14880	chloroplast	GO:0009507	chloroplast
AT4G14880	AT4G14880	membrane	GO:0016020	other membranes
AT4G14880	AT4G14880	nucleus	GO:0005634	nucleus
AT4G14880	AT4G14880	peroxisome	GO:0005777	other cytoplasmic components
AT4G14880	AT4G14880	peroxisome	GO:0005777	other intracellular components
AT4G14880	AT4G14880	plasma membrane	GO:0005886	plasma membrane
AT4G14880	AT4G14880	plasma membrane	GO:0005886	plasma membrane
AT4G14880	AT4G14880	apoplast	GO:0048046	extracellular
AT4G14880	AT4G14880	chloroplast	GO:0009507	chloroplast
AT4G14880	AT4G14880	membrane	GO:0016020	other membranes
AT4G14880	AT4G14880	nucleus	GO:0005634	nucleus
AT4G14880	AT4G14880	peroxisome	GO:0005777	other cytoplasmic components
AT4G14880	AT4G14880	peroxisome	GO:0005777	other intracellular components
AT4G14880	AT4G14880	plasma membrane	GO:0005886	plasma membrane
AT4G14880	AT4G14880	plasma membrane	GO:0005886	plasma membrane
AT4G14880	AT4G14880	apoplast	GO:0048046	extracellular
AT4G14880	AT4G14880	cytosol	GO:0005829	cytosol
AT4G14880	AT4G14880	peroxisome	GO:0005777	other cytoplasmic components
AT4G14880	AT4G14880	peroxisome	GO:0005777	other intracellular components
AT4G14880	AT4G14880	cysteine synthase activity	GO:0004124	other enzyme activity
AT4G14880	AT4G14880	cysteine synthase activity	GO:0004124	other enzyme activity
AT4G14880	AT4G14880	protein binding	GO:0005515	protein binding
AT4G14880	AT4G14880	aging	GO:0007568	other biological processes
AT4G14880	AT4G14880	cysteine biosynthetic process from serine	GO:0006535	other cellular processes
AT4G14880	AT4G14880	cysteine biosynthetic process from serine	GO:0006535	other metabolic processes
AT4G14880	AT4G14880	cysteine biosynthetic process	GO:0019344	other cellular processes
AT4G14880	AT4G14880	cysteine biosynthetic process	GO:0019344	other metabolic processes
AT4G14880	AT4G14880	response to cadmium ion	GO:0046686	other biological processes
AT4G14880	AT4G14880	response to cadmium ion	GO:0046686	other biological processes
AT4G14880	AT4G14880	response to cadmium ion	GO:0046686	other biological processes
AT4G14880	AT4G14880	response to cadmium ion	GO:0046686	other biological processes
AT4G14880	AT4G14880	chloroplast	GO:0009507	chloroplast
AT4G14880	AT4G14880	membrane	GO:0016020	other membranes
AT4G14880	AT4G14880	nucleus	GO:0005634	nucleus
AT4G14880	AT4G14880	peroxisome	GO:0005777	other cytoplasmic components
AT4G14880	AT4G14880	peroxisome	GO:0005777	other intracellular components
AT4G14880	AT4G14880	plasma membrane	GO:0005886	plasma membrane
AT4G14880	AT4G14880	plasma membrane	GO:0005886	plasma membrane
AT4G14880	AT4G14880	apoplast	GO:0048046	extracellular
AT4G14880	AT4G14880	response to cadmium ion	GO:0046686	other biological processes
AT4G14880	AT4G14880	chloroplast	GO:0009507	chloroplast
AT4G14880	AT4G14880	membrane	GO:0016020	other membranes
AT4G14880	AT4G14880	nucleus	GO:0005634	nucleus
AT4G14880	AT4G14880	peroxisome	GO:0005777	other cytoplasmic components
AT4G14880	AT4G14880	peroxisome	GO:0005777	other intracellular components
AT4G14880	AT4G14880	plasma membrane	GO:0005886	plasma membrane
AT4G14880	AT4G14880	plasma membrane	GO:0005886	plasma membrane
AT4G14880	AT4G14880	apoplast	GO:0048046	extracellular

Gene Network Informations
Gene Network	Interact with..
Contig3023[interact with..]	Not found!