Contig View

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Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
454	FXQQ4OB02I38E6	240

Contig Map:

(ProjectName=454
SequenceName=NoContigFind):

Sequences View:[NoContigFind](Contig Seguence)

Sequences View:[FXQQ4OB02I38E6](Singleton Sequence)

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
ref	XP_002509397.1	predicted protein	Micromonas sp. RCC299	2336	162 bits (410)	1e-38	80/80 (100%)	80/80 (100%)	+1

KEGG Pathway	GO
NoContigFind[1 Pathway]	NoContigFind[4 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Genetic Information Processing	Transcription	03040	Spliceosome	[PATH:ath03040]	FXQQ4OB02I38E6	AT1G80070	454

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT1G80070	AT1G80070	chloroplast	GO:0009507	chloroplast
AT1G80070	AT1G80070	membrane	GO:0016020	other membranes
AT1G80070	AT1G80070	"nuclear mRNA splicing, via spliceosome"	GO:0000398	other cellular processes
AT1G80070	AT1G80070	"nuclear mRNA splicing, via spliceosome"	GO:0000398	other metabolic processes

Gene Network Informations
Gene Network	Interact with..
FXQQ4OB02I38E6[interact with..]	contig03262 FXQQ4OB02GXMTX contig04396 contig01118 FXQQ4OB01B85JL FXQQ4OB01BG429 FXQQ4OB02GN4S9 FXQQ4OB01DHWZ2 FXQQ4OB02GIPIO FXQQ4OB01EMONQ FXQQ4OB02FWU6A FXQQ4OB01CSPUS FXQQ4OB01DRESH FXQQ4OB02F9DGA FXQQ4OB02HNK05 FXQQ4OB02HO1YO contig06869 FXQQ4OB01C76A2 FXQQ4OB01BZKU6 FXQQ4OB02G9GTG

Query Name	Length of query	GenBank	Accession number(Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
contig03262	453	ref	XP_002524811.1	Speckle-type POZ protein, putative	Ricinus communis	500	179 bits (455)	7e-44	86/98 (87%)	94/98 (95%)	-3
FXQQ4OB02GXMTX	246	gb	EEC67131.1	hypothetical protein OsI_33953	Oryza sativa Indica Group	502	76.6 bits (187)	3e-28	35/46 (76%)	39/46 (84%)	+2
contig04396	258	ref	XP_002532501.1	116 kD U5 small nuclear ribonucleoprotein component, putative	Ricinus communis	992	171 bits (433)	2e-41	82/86 (95%)	86/86 (100%)	-1
contig01118	424	emb	CAO68741.1	unnamed protein product	Vitis vinifera	320	129 bits (325)	2e-31	69/106 (65%)	74/106 (69%)	-1
FXQQ4OB01B85JL	124	ref	NP_001152185.1	pre-mRNA-splicing factor PRP17	Zea mays	573	80.5 bits (197)	5e-14	39/39 (100%)	39/39 (100%)	+2
FXQQ4OB01BG429	200	ref	NP_001050302.1	Os03g0397500	Oryza sativa (japonica cultivar-group)	573	136 bits (343)	6e-31	65/66 (98%)	65/66 (98%)	-1
FXQQ4OB02GN4S9	239	ref	NP_001050302.1	Os03g0397500	Oryza sativa (japonica cultivar-group)	573	163 bits (413)	5e-39	78/79 (98%)	78/79 (98%)	-2
FXQQ4OB01DHWZ2	224	emb	CAO41560.1	unnamed protein product	Vitis vinifera	617	65.9 bits (159)	1e-09	31/48 (64%)	37/48 (77%)	-3
FXQQ4OB02GIPIO	272	ref	NP_001053516.1	Os04g0555400	Oryza sativa (japonica cultivar-group)	484	87.8 bits (216)	3e-16	47/69 (68%)	50/69 (72%)	-2
FXQQ4OB01EMONQ	239	emb	CAO71409.1	unnamed protein product	Vitis vinifera	552	119 bits (298)	1e-34	53/60 (88%)	56/60 (93%)	+2
FXQQ4OB02FWU6A	250	ref	XP_002524613.1	step II splicing factor slu7, putative	Ricinus communis	536	142 bits (358)	1e-32	67/83 (80%)	77/83 (92%)	+1
FXQQ4OB01CSPUS	192	emb	CAO46309.1	unnamed protein product	Vitis vinifera	386	130 bits (326)	6e-29	59/63 (93%)	63/63 (100%)	+2
FXQQ4OB01DRESH	168	gb	ACG41798.1	WD-repeat protein 57	Zea mays	335	115 bits (287)	2e-24	53/55 (96%)	54/55 (98%)	+2
FXQQ4OB02F9DGA	251	ref	XP_002524865.1	WD-repeat protein, putative	Ricinus communis	345	167 bits (424)	3e-40	76/83 (91%)	82/83 (98%)	-2
FXQQ4OB02HNK05	126	ref	XP_001769653.1	predicted protein	Physcomitrella patens subsp. patens	359	91.3 bits (225)	3e-17	39/41 (95%)	40/41 (97%)	+1
FXQQ4OB02HO1YO	192	emb	CAO46309.1	unnamed protein product	Vitis vinifera	386	130 bits (326)	6e-29	59/63 (93%)	63/63 (100%)	+2
contig06869	245	ref	NP_001046623.1	Os02g0301500	Oryza sativa (japonica cultivar-group)	546	152 bits (384)	1e-35	75/81 (92%)	79/81 (97%)	-3
FXQQ4OB01C76A2	227	emb	CAO45370.1	unnamed protein product	Vitis vinifera	683	146 bits (368)	8e-34	72/75 (96%)	74/75 (98%)	+2
FXQQ4OB01BZKU6	269	ref	XP_002328066.1	predicted protein	Populus trichocarpa	145	99.0 bits (245)	1e-19	40/41 (97%)	41/41 (100%)	+1
FXQQ4OB02G9GTG	267	ref	XP_002328066.1	predicted protein	Populus trichocarpa	145	132 bits (332)	2e-32	54/55 (98%)	55/55 (100%)	-1