Contig View

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Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
454	FXQQ4OB01C76A2	227

Contig Map:

(ProjectName=454
SequenceName=NoContigFind):

Sequences View:[NoContigFind](Contig Seguence)

Sequences View:[FXQQ4OB01C76A2](Singleton Sequence)

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
emb	CAO45370.1	unnamed protein product	Vitis vinifera	683	146 bits (368)	8e-34	72/75 (96%)	74/75 (98%)	+2

KEGG Pathway	GO
NoContigFind[1 Pathway]	NoContigFind[12 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Genetic Information Processing	Transcription	03040	Spliceosome	[PATH:ath03040]	FXQQ4OB01C76A2	AT3G26560	454

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT3G26560	AT3G26560	ATP binding	GO:0005524	nucleotide binding
AT3G26560	AT3G26560	ATP-dependent helicase activity	GO:0008026	hydrolase activity
AT3G26560	AT3G26560	ATP-dependent helicase activity	GO:0008026	other enzyme activity
AT3G26560	AT3G26560	RNA binding	GO:0003723	DNA or RNA binding
AT3G26560	AT3G26560	helicase activity	GO:0004386	other enzyme activity
AT3G26560	AT3G26560	nucleic acid binding	GO:0003676	nucleic acid binding
AT3G26560	AT3G26560	cytosol	GO:0005829	cytosol
AT3G26560	AT3G26560	mitochondrion	GO:0005739	mitochondria
AT3G26560	AT3G26560	ATP binding	GO:0005524	nucleotide binding
AT3G26560	AT3G26560	ATP-dependent RNA helicase activity	GO:0004004	hydrolase activity
AT3G26560	AT3G26560	ATP-dependent RNA helicase activity	GO:0004004	other enzyme activity
AT3G26560	AT3G26560	RNA binding	GO:0003723	DNA or RNA binding

Gene Network Informations
Gene Network	Interact with..
FXQQ4OB01C76A2[interact with..]	FXQQ4OB01B85JL FXQQ4OB01BG429 FXQQ4OB02GN4S9 FXQQ4OB01EMONQ FXQQ4OB02FWU6A FXQQ4OB02GLUU2 FXQQ4OB01BX6SV FXQQ4OB02I3T6Z FXQQ4OB01CJD82 FXQQ4OB01CNW5N FXQQ4OB02HK7JB

Query Name	Length of query	GenBank	Accession number(Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
FXQQ4OB01B85JL	124	ref	NP_001152185.1	pre-mRNA-splicing factor PRP17	Zea mays	573	80.5 bits (197)	5e-14	39/39 (100%)	39/39 (100%)	+2
FXQQ4OB01BG429	200	ref	NP_001050302.1	Os03g0397500	Oryza sativa (japonica cultivar-group)	573	136 bits (343)	6e-31	65/66 (98%)	65/66 (98%)	-1
FXQQ4OB02GN4S9	239	ref	NP_001050302.1	Os03g0397500	Oryza sativa (japonica cultivar-group)	573	163 bits (413)	5e-39	78/79 (98%)	78/79 (98%)	-2
FXQQ4OB01EMONQ	239	emb	CAO71409.1	unnamed protein product	Vitis vinifera	552	119 bits (298)	1e-34	53/60 (88%)	56/60 (93%)	+2
FXQQ4OB02FWU6A	250	ref	XP_002524613.1	step II splicing factor slu7, putative	Ricinus communis	536	142 bits (358)	1e-32	67/83 (80%)	77/83 (92%)	+1
FXQQ4OB02GLUU2	248	gb	ACP43318.1	mannose-6-phosphate isomerase	Citrus maxima	213	77.8 bits (190)	1e-22	37/55 (67%)	41/55 (74%)	+1
FXQQ4OB01BX6SV	204	ref	XP_001763879.1	predicted protein	Physcomitrella patens subsp. patens	522	123 bits (308)	7e-27	58/68 (85%)	62/68 (91%)	-1
FXQQ4OB02I3T6Z	193	emb	CAO71468.1	unnamed protein product	Vitis vinifera	453	114 bits (285)	3e-24	51/64 (79%)	58/64 (90%)	+2
FXQQ4OB01CJD82	211	ref	XP_002509927.1	crooked neck protein, putative	Ricinus communis	696	118 bits (295)	2e-25	58/70 (82%)	65/70 (92%)	-2
FXQQ4OB01CNW5N	234	ref	XP_001765282.1	predicted protein	Physcomitrella patens subsp. patens	717	83.2 bits (204)	8e-15	36/48 (75%)	42/48 (87%)	+1
FXQQ4OB02HK7JB	242	dbj	BAH93553.1	Os06g0523800	Oryza sativa Japonica Group	699	152 bits (384)	1e-35	68/78 (87%)	75/78 (96%)	+2