Back [Phalaenopsis Transcriptome]
Library Name:       Contig Lists:     
Contig Information:
Project NameQuery NameLength of query
454FXQQ4OB01CWUQL238

Contig Map:
(ProjectName=454
SequenceName=NoContigFind):

Sequences View:[NoContigFind](Contig Seguence)


Sequences View:[FXQQ4OB01CWUQL](Singleton Sequence)

Contig Annotation:
GenBankAccession number
(Best hits in the GenBank)
AnnotationSpeciesLength of homologous protein(Amino Acid)ScoreExpect valueIdentitiessimilarityFrame
refXP_002518663.1 U520, putative Ricinus communis1809154 bits (389)3e-3669/74 (93%)73/74 (98%) -3

KEGG PathwayGO
NoContigFind[1 Pathway]NoContigFind[20 GoTerm]
Pathway Informations
First-level termsSecond-level termsKEGG pathway NumKEGG pathway NameKEGG pathway Description contig NamelocusNameproject Name
Genetic Information ProcessingTranscription03040Spliceosome[PATH:ath03040]FXQQ4OB01CWUQLAT1G20960454

GO Informations
Locus NameGo NameGo Class DescriptionsGO idAnotations01
AT1G20960AT1G20960membraneGO:0016020other membranes
AT1G20960AT1G20960nucleolusGO:0005730nucleus
AT1G20960AT1G20960nucleolusGO:0005730other intracellular components
AT1G20960AT1G20960ATP bindingGO:0005524nucleotide binding
AT1G20960AT1G20960ATP-dependent helicase activityGO:0008026hydrolase activity
AT1G20960AT1G20960ATP-dependent helicase activityGO:0008026other enzyme activity
AT1G20960AT1G20960helicase activityGO:0004386other enzyme activity
AT1G20960AT1G20960nucleic acid bindingGO:0003676nucleic acid binding
AT1G20960AT1G20960nucleotide bindingGO:0000166nucleotide binding
AT1G20960AT1G20960nucleoside-triphosphatase activityGO:0017111hydrolase activity
AT1G20960AT1G20960ATP-dependent helicase activityGO:0008026hydrolase activity
AT1G20960AT1G20960ATP-dependent helicase activityGO:0008026other enzyme activity
AT1G20960AT1G20960embryo development ending in seed dormancyGO:0009793developmental processes
AT1G20960AT1G20960ATP bindingGO:0005524nucleotide binding
AT1G20960AT1G20960ATP-dependent helicase activityGO:0008026hydrolase activity
AT1G20960AT1G20960ATP-dependent helicase activityGO:0008026other enzyme activity
AT1G20960AT1G20960helicase activityGO:0004386other enzyme activity
AT1G20960AT1G20960nucleic acid bindingGO:0003676nucleic acid binding
AT1G20960AT1G20960nucleotide bindingGO:0000166nucleotide binding
AT1G20960AT1G20960nucleoside-triphosphatase activityGO:0017111hydrolase activity

Gene Network Informations
Gene NetworkInteract with..
FXQQ4OB01CWUQL[interact with..]contig03262
FXQQ4OB01B85JL
FXQQ4OB01BG429
FXQQ4OB02GN4S9
FXQQ4OB01BTT6J
FXQQ4OB01CWUQL
FXQQ4OB01DR0ZF
FXQQ4OB02FXWA7
FXQQ4OB02H7XYV
FXQQ4OB02HMBSP
FXQQ4OB02JK8VA
FXQQ4OB01A11TJ
FXQQ4OB01DCD93
FXQQ4OB01EPE5U
FXQQ4OB01DHWZ2
contig02443
contig05802
FXQQ4OB01AJIAH
FXQQ4OB01B0Z4A
FXQQ4OB01BH1D5
FXQQ4OB01BWQGN
FXQQ4OB01CGZ0N
FXQQ4OB02G2JL0
FXQQ4OB02GJOX2
FXQQ4OB02I38E6
contig04813
contig06120
FXQQ4OB02GQ4U4
contig03261
FXQQ4OB01CN14Y
FXQQ4OB02GIAXM
FXQQ4OB02GIW5K
FXQQ4OB02I166S
FXQQ4OB02IBN26
FXQQ4OB02IX7PA
FXQQ4OB02JOLV1
FXQQ4OB01APNS1
FXQQ4OB01CQBCR
FXQQ4OB01D968Z
FXQQ4OB01CIWZX
FXQQ4OB01D6AUG
FXQQ4OB02F968G
Query NameLength of queryGenBankAccession number(Best hits in the GenBank)AnnotationSpeciesLength of homologous protein(Amino Acid)ScoreExpect valueIdentitiessimilarityFrame
contig03262453refXP_002524811.1 Speckle-type POZ protein, putative Ricinus communis500179 bits (455)7e-4486/98 (87%)94/98 (95%) -3
FXQQ4OB01B85JL124refNP_001152185.1 pre-mRNA-splicing factor PRP17 Zea mays57380.5 bits (197)5e-1439/39 (100%)39/39 (100%) +2
FXQQ4OB01BG429200refNP_001050302.1 Os03g0397500 Oryza sativa (japonica cultivar-group)573136 bits (343)6e-3165/66 (98%)65/66 (98%) -1
FXQQ4OB02GN4S9239refNP_001050302.1 Os03g0397500 Oryza sativa (japonica cultivar-group)573163 bits (413)5e-3978/79 (98%)78/79 (98%) -2
FXQQ4OB01BTT6J244refXP_002518663.1 U520, putative Ricinus communis1809119 bits (299)8e-2653/80 (66%)69/80 (86%) +2
FXQQ4OB01CWUQL238refXP_002518663.1 U520, putative Ricinus communis1809154 bits (389)3e-3669/74 (93%)73/74 (98%) -3
FXQQ4OB01DR0ZF235refXP_002518663.1 U520, putative Ricinus communis1809146 bits (369)6e-3471/78 (91%)76/78 (97%) -1
FXQQ4OB02FXWA7246embCAO64800.1 unnamed protein product Vitis vinifera2072138 bits (348)2e-3169/81 (85%)74/81 (91%) +3
FXQQ4OB02H7XYV237refXP_002518663.1 U520, putative Ricinus communis1809146 bits (369)6e-3471/78 (91%)76/78 (97%) -3
FXQQ4OB02HMBSP174gbEEE56150.1 hypothetical protein OsJ_05035 Oryza sativa Japonica Group2238118 bits (296)2e-2554/57 (94%)56/57 (98%) +1
FXQQ4OB02JK8VA244gbEEE56150.1 hypothetical protein OsJ_05035 Oryza sativa Japonica Group2238119 bits (298)1e-2560/80 (75%)63/80 (78%) -3
FXQQ4OB01A11TJ256refXP_002520330.1 replication factor C / DNA polymerase III gamma-tau subunit, putative Ricinus communis342105 bits (262)2e-2149/50 (98%)50/50 (100%) -3
FXQQ4OB01DCD93249refNP_564148.1 emb1968 (embryo defective 1968); ATP binding / ATPase/ DNA binding / DNA clamp loader/ nucleoside-triphosphatase/339128 bits (322)2e-2865/72 (90%)67/72 (93%) -1
FXQQ4OB01EPE5U119refXP_002307456.1 predicted protein Populus trichocarpa34267.8 bits (164)4e-1031/31 (100%)31/31 (100%) +3
FXQQ4OB01DHWZ2224embCAO41560.1 unnamed protein product Vitis vinifera61765.9 bits (159)1e-0931/48 (64%)37/48 (77%) -3
contig02443814embCAO62711.1 unnamed protein product Vitis vinifera1029438 bits (1127)e-121197/220 (89%)211/220 (95%), Gaps = 1/220 (0%) +3
contig05802354gbAAD55467.1AC009322_7 Putative splicing factor Prp8 Arabidopsis thaliana2359231 bits (590)1e-59117/118 (99%)118/118 (100%) +1
FXQQ4OB01AJIAH201refXP_002574918.1 splicing factor Prp8 Schistosoma mansoni2047139 bits (350)1e-3166/66 (100%)66/66 (100%) +2
FXQQ4OB01B0Z4A261refXP_002517654.1 Pre-mRNA-processing-splicing factor, putative Ricinus communis2376180 bits (456)5e-4486/86 (100%)86/86 (100%) +3
FXQQ4OB01BH1D5284refXP_002574918.1 splicing factor Prp8 Schistosoma mansoni2047194 bits (492)3e-4890/90 (100%)90/90 (100%) +2
FXQQ4OB01BWQGN232refXP_002517654.1 Pre-mRNA-processing-splicing factor, putative Ricinus communis2376141 bits (355)3e-3265/67 (97%)66/67 (98%) +1
FXQQ4OB01CGZ0N225refXP_002517654.1 Pre-mRNA-processing-splicing factor, putative Ricinus communis2376158 bits (399)2e-3773/75 (97%)74/75 (98%) -1
FXQQ4OB02G2JL0208refXP_002574918.1 splicing factor Prp8 Schistosoma mansoni2047125 bits (315)1e-2759/59 (100%)59/59 (100%) +3
FXQQ4OB02GJOX2236refXP_002327417.1 predicted protein Populus trichocarpa2357135 bits (339)7e-3366/66 (100%)66/66 (100%) -3
FXQQ4OB02I38E6240refXP_002509397.1 predicted protein Micromonas sp. RCC2992336162 bits (410)1e-3880/80 (100%)80/80 (100%) +1
contig04813485refNP_001046068.1 Os02g0177500 Oryza sativa (japonica cultivar-group)86158 bits (400)2e-3775/77 (97%)77/77 (100%) +1
contig06120253refXP_002513552.1 splicing factor 3a, putative Ricinus communis459123 bits (308)7e-2759/85 (69%)68/85 (80%), Gaps = 1/85 (1%) -1
FXQQ4OB02GQ4U4258embCAO48518.1 unnamed protein product Vitis vinifera512115 bits (287)2e-2452/78 (66%)56/78 (71%) +2
contig03261254refXP_002527133.1 ATP-dependent RNA helicase, putative Ricinus communis1269150 bits (378)6e-3576/82 (92%)78/82 (95%) -3
FXQQ4OB01CN14Y263embCAO46629.1 unnamed protein product Vitis vinifera1520134 bits (338)2e-3064/87 (73%)69/87 (79%) +3
FXQQ4OB02GIAXM252embCAL55058.1 putative DEAH-box RNA helicase (ISS) Ostreococcus tauri121763.9 bits (154)2e-1726/44 (59%)35/44 (79%) -1
FXQQ4OB02GIW5K226refXP_002527133.1 ATP-dependent RNA helicase, putative Ricinus communis1269134 bits (338)2e-3067/75 (89%)70/75 (93%) +1
FXQQ4OB02I166S231refNP_001059742.1 Os07g0508000 Oryza sativa (japonica cultivar-group)1280145 bits (367)1e-3369/71 (97%)70/71 (98%) -1
FXQQ4OB02IBN26243refXP_002527133.1 ATP-dependent RNA helicase, putative Ricinus communis1269157 bits (398)3e-3776/79 (96%)79/79 (100%) -1
FXQQ4OB02IX7PA247refNP_001059742.1 Os07g0508000 Oryza sativa (japonica cultivar-group)128097.4 bits (241)4e-1948/68 (70%)49/68 (72%) -3
FXQQ4OB02JOLV1219embCAO46629.1 unnamed protein product Vitis vinifera152070.1 bits (170)5e-2236/39 (92%)37/39 (94%) -3
FXQQ4OB01APNS1232embCAO16590.1 unnamed protein product Vitis vinifera888100 bits (248)7e-2049/76 (64%)63/76 (82%) +3
FXQQ4OB01CQBCR238embCAO16590.1 unnamed protein product Vitis vinifera88887.8 bits (216)1e-1742/64 (65%)55/64 (85%) -2
FXQQ4OB01D968Z235embCAO16590.1 unnamed protein product Vitis vinifera88894.0 bits (232)5e-1846/73 (63%)60/73 (82%) +3
FXQQ4OB01CIWZX263gbABK21171.1 unknown Picea sitchensis85162 bits (409)1e-3880/81 (98%)80/81 (98%) +1
FXQQ4OB01D6AUG201gbABK21171.1 unknown Picea sitchensis85106 bits (265)7e-2251/52 (98%)51/52 (98%) +1
FXQQ4OB02F968G198refXP_002299989.1 predicted protein Populus trichocarpa8859.7 bits (143)1e-0728/28 (100%)28/28 (100%) +1