Back [Phalaenopsis Transcriptome]
Library Name:       Contig Lists:     
Contig Information:
Project NameQuery NameLength of query
454FXQQ4OB01D968Z235

Contig Map:
(ProjectName=454
SequenceName=NoContigFind):

Sequences View:[NoContigFind](Contig Seguence)


Sequences View:[FXQQ4OB01D968Z](Singleton Sequence)

Contig Annotation:
GenBankAccession number
(Best hits in the GenBank)
AnnotationSpeciesLength of homologous protein(Amino Acid)ScoreExpect valueIdentitiessimilarityFrame
embCAO16590.1 unnamed protein product Vitis vinifera88894.0 bits (232)5e-1846/73 (63%)60/73 (82%) +3

KEGG PathwayGO
NoContigFind[1 Pathway]NoContigFind[4 GoTerm]
Pathway Informations
First-level termsSecond-level termsKEGG pathway NumKEGG pathway NameKEGG pathway Description contig NamelocusNameproject Name
Genetic Information ProcessingTranscription03040Spliceosome[PATH:ath03040]FXQQ4OB01D968ZAT5G28740454

GO Informations
Locus NameGo NameGo Class DescriptionsGO idAnotations01
AT5G28740AT5G28740intracellularGO:0005622other intracellular components
AT5G28740AT5G28740bindingGO:0005488other binding
AT5G28740AT5G28740RNA processingGO:0006396other cellular processes
AT5G28740AT5G28740RNA processingGO:0006396other metabolic processes

Gene Network Informations
Gene NetworkInteract with..
FXQQ4OB01D968Z[interact with..]FXQQ4OB01B85JL
FXQQ4OB01BG429
FXQQ4OB02GN4S9
contig02443
contig05802
FXQQ4OB01AJIAH
FXQQ4OB01B0Z4A
FXQQ4OB01BH1D5
FXQQ4OB01BWQGN
FXQQ4OB01CGZ0N
FXQQ4OB02G2JL0
FXQQ4OB02GJOX2
FXQQ4OB02I38E6
FXQQ4OB01BX6SV
FXQQ4OB02I3T6Z
FXQQ4OB01DDSA7
FXQQ4OB02JRWA1
contig02487
FXQQ4OB01C5DVL
contig01661
contig02187
FXQQ4OB01ANLXP
FXQQ4OB02G2ORN
FXQQ4OB01BJNSS
FXQQ4OB02G647U
contig06120
FXQQ4OB02GQ4U4
FXQQ4OB01APNS1
FXQQ4OB01CQBCR
FXQQ4OB01D968Z
FXQQ4OB01CJD82
FXQQ4OB01CNW5N
FXQQ4OB02HK7JB
Query NameLength of queryGenBankAccession number(Best hits in the GenBank)AnnotationSpeciesLength of homologous protein(Amino Acid)ScoreExpect valueIdentitiessimilarityFrame
FXQQ4OB01B85JL124refNP_001152185.1 pre-mRNA-splicing factor PRP17 Zea mays57380.5 bits (197)5e-1439/39 (100%)39/39 (100%) +2
FXQQ4OB01BG429200refNP_001050302.1 Os03g0397500 Oryza sativa (japonica cultivar-group)573136 bits (343)6e-3165/66 (98%)65/66 (98%) -1
FXQQ4OB02GN4S9239refNP_001050302.1 Os03g0397500 Oryza sativa (japonica cultivar-group)573163 bits (413)5e-3978/79 (98%)78/79 (98%) -2
contig02443814embCAO62711.1 unnamed protein product Vitis vinifera1029438 bits (1127)e-121197/220 (89%)211/220 (95%), Gaps = 1/220 (0%) +3
contig05802354gbAAD55467.1AC009322_7 Putative splicing factor Prp8 Arabidopsis thaliana2359231 bits (590)1e-59117/118 (99%)118/118 (100%) +1
FXQQ4OB01AJIAH201refXP_002574918.1 splicing factor Prp8 Schistosoma mansoni2047139 bits (350)1e-3166/66 (100%)66/66 (100%) +2
FXQQ4OB01B0Z4A261refXP_002517654.1 Pre-mRNA-processing-splicing factor, putative Ricinus communis2376180 bits (456)5e-4486/86 (100%)86/86 (100%) +3
FXQQ4OB01BH1D5284refXP_002574918.1 splicing factor Prp8 Schistosoma mansoni2047194 bits (492)3e-4890/90 (100%)90/90 (100%) +2
FXQQ4OB01BWQGN232refXP_002517654.1 Pre-mRNA-processing-splicing factor, putative Ricinus communis2376141 bits (355)3e-3265/67 (97%)66/67 (98%) +1
FXQQ4OB01CGZ0N225refXP_002517654.1 Pre-mRNA-processing-splicing factor, putative Ricinus communis2376158 bits (399)2e-3773/75 (97%)74/75 (98%) -1
FXQQ4OB02G2JL0208refXP_002574918.1 splicing factor Prp8 Schistosoma mansoni2047125 bits (315)1e-2759/59 (100%)59/59 (100%) +3
FXQQ4OB02GJOX2236refXP_002327417.1 predicted protein Populus trichocarpa2357135 bits (339)7e-3366/66 (100%)66/66 (100%) -3
FXQQ4OB02I38E6240refXP_002509397.1 predicted protein Micromonas sp. RCC2992336162 bits (410)1e-3880/80 (100%)80/80 (100%) +1
FXQQ4OB01BX6SV204refXP_001763879.1 predicted protein Physcomitrella patens subsp. patens522123 bits (308)7e-2758/68 (85%)62/68 (91%) -1
FXQQ4OB02I3T6Z193embCAO71468.1 unnamed protein product Vitis vinifera453114 bits (285)3e-2451/64 (79%)58/64 (90%) +2
FXQQ4OB01DDSA7233refXP_002304788.1 predicted protein Populus trichocarpa420115 bits (289)1e-2460/76 (78%)66/76 (86%) +1
FXQQ4OB02JRWA1233refXP_002304788.1 predicted protein Populus trichocarpa42072.4 bits (176)1e-1141/78 (52%)46/78 (58%), Gaps = 1/78 (1%) -2
contig02487268refNP_001049931.1 Os03g0314100 Oryza sativa (japonica cultivar-group)564144 bits (364)2e-3371/89 (79%)77/89 (86%) +1
FXQQ4OB01C5DVL221refNP_191790.1 RNA helicase, putative Arabidopsis thaliana726140 bits (354)3e-3267/72 (93%)70/72 (97%) +1
contig01661606refXP_002462637.1 hypothetical protein SORBIDRAFT_02g029380 Sorghum bicolor258106 bits (265)2e-3549/55 (89%)53/55 (96%) +1
contig02187981gbACG47588.1 60S ribosomal protein L7a Zea mays255399 bits (1024)e-109198/236 (83%)208/236 (88%) +3
FXQQ4OB01ANLXP213refXP_002330929.1 predicted protein Populus trichocarpa25882.4 bits (202)1e-1439/47 (82%)41/47 (87%) +1
FXQQ4OB02G2ORN276refXP_002330929.1 predicted protein Populus trichocarpa25897.1 bits (240)6e-2145/51 (88%)47/51 (92%) +1
FXQQ4OB01BJNSS244refXP_002516938.1 PP1/PP2A phosphatases pleiotropic regulator PRL1, putative Ricinus communis415162 bits (409)1e-3873/80 (91%)79/80 (98%) -3
FXQQ4OB02G647U90refNP_001149303.1 LOC100282926 Zea mays47867.4 bits (163)5e-1029/30 (96%)30/30 (100%) -1
contig06120253refXP_002513552.1 splicing factor 3a, putative Ricinus communis459123 bits (308)7e-2759/85 (69%)68/85 (80%), Gaps = 1/85 (1%) -1
FXQQ4OB02GQ4U4258embCAO48518.1 unnamed protein product Vitis vinifera512115 bits (287)2e-2452/78 (66%)56/78 (71%) +2
FXQQ4OB01APNS1232embCAO16590.1 unnamed protein product Vitis vinifera888100 bits (248)7e-2049/76 (64%)63/76 (82%) +3
FXQQ4OB01CQBCR238embCAO16590.1 unnamed protein product Vitis vinifera88887.8 bits (216)1e-1742/64 (65%)55/64 (85%) -2
FXQQ4OB01D968Z235embCAO16590.1 unnamed protein product Vitis vinifera88894.0 bits (232)5e-1846/73 (63%)60/73 (82%) +3
FXQQ4OB01CJD82211refXP_002509927.1 crooked neck protein, putative Ricinus communis696118 bits (295)2e-2558/70 (82%)65/70 (92%) -2
FXQQ4OB01CNW5N234refXP_001765282.1 predicted protein Physcomitrella patens subsp. patens71783.2 bits (204)8e-1536/48 (75%)42/48 (87%) +1
FXQQ4OB02HK7JB242dbjBAH93553.1 Os06g0523800 Oryza sativa Japonica Group699152 bits (384)1e-3568/78 (87%)75/78 (96%) +2