Contig View

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Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
FPTEVCPM	FPTEVCPM080_H04_PDNR-F	813

Contig Map:

(ProjectName=FPTEVCPM
SequenceName=NoContigFind):

Sequences View:[NoContigFind](Contig Seguence)

Sequences View:[FPTEVCPM080_H04_PDNR-F](Singleton Sequence)

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
emb	CBI32005.1	unnamed protein product	Vitis vinifera	191	320 bits (820)	1e-85	152/154 (98%)	153/154 (99%)	+2

KEGG Pathway	GO
NoContigFind[1 Pathway]	NoContigFind[15 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Genetic Information Processing	Folding, Sorting and Degradation	04120	Ubiquitin mediated proteolysis	[PATH:ath04120]	FPTEVCPM080_H04_PDNR-F	AT2G02760	FPTEVCPM

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT2G02760	AT2G02760	ubiquitin-protein ligase activity	GO:0004842	other enzyme activity
AT2G02760	AT2G02760	ubiquitin-protein ligase activity	GO:0004842	other enzyme activity
AT2G02760	AT2G02760	ubiquitin-protein ligase activity	GO:0004842	other enzyme activity
AT2G02760	AT2G02760	UV protection	GO:0009650	response to abiotic or biotic stimulus
AT2G02760	AT2G02760	ubiquitin-dependent protein catabolic process	GO:0006511	protein metabolism
AT2G02760	AT2G02760	ubiquitin-dependent protein catabolic process	GO:0006511	other cellular processes
AT2G02760	AT2G02760	ubiquitin-dependent protein catabolic process	GO:0006511	other metabolic processes
AT2G02760	AT2G02760	ubiquitin-dependent protein catabolic process	GO:0006511	protein metabolism
AT2G02760	AT2G02760	ubiquitin-dependent protein catabolic process	GO:0006511	other cellular processes
AT2G02760	AT2G02760	ubiquitin-dependent protein catabolic process	GO:0006511	other metabolic processes
AT2G02760	AT2G02760	vegetative to reproductive phase transition of meristem	GO:0010228	developmental processes
AT2G02760	AT2G02760	histone H2B ubiquitination	GO:0033523	protein metabolism
AT2G02760	AT2G02760	histone H2B ubiquitination	GO:0033523	other cellular processes
AT2G02760	AT2G02760	histone H2B ubiquitination	GO:0033523	other metabolic processes
AT2G02760	AT2G02760	histone H2B ubiquitination	GO:0033523	cell organization and biogenesis

Gene Network Informations
Gene Network	Interact with..
FPTEVCPM080_H04_PDNR-F[interact with..]	FPTEVCPM065_D06_PDNR-F Contig0232 FPTEVCPM027_G01_PDNR-F FPTEVCPM063_H06_PDNR-F FPTEVCPM076_F05_PDNR-F FPTEVCPM080_H04_PDNR-F FPTEVCPM078_H01_PDNR-F

Query Name	Length of query	GenBank	Accession number(Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
FPTEVCPM065_D06_PDNR-F	427	emb	CBI31123.1	unnamed protein product	Vitis vinifera	168	107 bits (267)	4e-22	57/84 (67%)	62/84 (73%)	+1
Contig0232	846	gb	ACN50179.1	ubiquitin carrier-like protein	Annona cherimola	152	308 bits (790)	3e-82	145/152 (95%)	148/152 (97%)	+2
FPTEVCPM027_G01_PDNR-F	838	emb	CBI32005.1	unnamed protein product	Vitis vinifera	191	320 bits (821)	8e-86	153/160 (95%)	154/160 (96%)	+2
FPTEVCPM063_H06_PDNR-F	835	emb	CBI32005.1	unnamed protein product	Vitis vinifera	191	322 bits (824)	4e-86	153/153 (100%)	153/153 (100%)	+2
FPTEVCPM076_F05_PDNR-F	560	gb	ABC01903.1	ubiquitin carrier-like protein	Solanum tuberosum	152	223 bits (568)	6e-57	104/108 (96%)	106/108 (98%)	+2
FPTEVCPM080_H04_PDNR-F	813	emb	CBI32005.1	unnamed protein product	Vitis vinifera	191	320 bits (820)	1e-85	152/154 (98%)	153/154 (99%)	+2
FPTEVCPM078_H01_PDNR-F	868	ref	NP_001055755.1	Os05g0460200	Oryza sativa (japonica cultivar-group)	169	288 bits (736)	6e-76	133/147 (90%)	141/147 (95%)	+3