Contig View

Back [Phalaenopsis Transcriptome]

Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
FPTEVCPM	FPTEVCPM078_H01_PDNR-F	868

Contig Map:

(ProjectName=FPTEVCPM
SequenceName=NoContigFind):

Sequences View:[NoContigFind](Contig Seguence)

Sequences View:[FPTEVCPM078_H01_PDNR-F](Singleton Sequence)

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
ref	NP_001055755.1	Os05g0460200	Oryza sativa (japonica cultivar-group)	169	288 bits (736)	6e-76	133/147 (90%)	141/147 (95%)	+3

KEGG Pathway	GO
NoContigFind[2 Pathway]	NoContigFind[18 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Genetic Information Processing	Folding, Sorting and Degradation	04141	Protein processing in endoplasmic reticulum	[PATH:ath04141]	FPTEVCPM078_H01_PDNR-F	AT3G46460	FPTEVCPM
Genetic Information Processing	Folding, Sorting and Degradation	04120	Ubiquitin mediated proteolysis	[PATH:ath04120]	FPTEVCPM078_H01_PDNR-F	AT3G46460	FPTEVCPM

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT3G46460	AT3G46460	cellular_component	GO:0005575	unknown cellular components
AT3G46460	AT3G46460	ubiquitin-protein ligase activity	GO:0004842	other enzyme activity
AT3G46460	AT3G46460	ubiquitin-protein ligase activity	GO:0004842	other enzyme activity
AT3G46460	AT3G46460	ubiquitin-dependent protein catabolic process	GO:0006511	protein metabolism
AT3G46460	AT3G46460	ubiquitin-dependent protein catabolic process	GO:0006511	other cellular processes
AT3G46460	AT3G46460	ubiquitin-dependent protein catabolic process	GO:0006511	other metabolic processes
AT3G46460	AT3G46460	ubiquitin-dependent protein catabolic process	GO:0006511	protein metabolism
AT3G46460	AT3G46460	ubiquitin-dependent protein catabolic process	GO:0006511	other cellular processes
AT3G46460	AT3G46460	ubiquitin-dependent protein catabolic process	GO:0006511	other metabolic processes
AT3G46460	AT3G46460	cellular_component	GO:0005575	unknown cellular components
AT3G46460	AT3G46460	ubiquitin-protein ligase activity	GO:0004842	other enzyme activity
AT3G46460	AT3G46460	ubiquitin-protein ligase activity	GO:0004842	other enzyme activity
AT3G46460	AT3G46460	ubiquitin-dependent protein catabolic process	GO:0006511	protein metabolism
AT3G46460	AT3G46460	ubiquitin-dependent protein catabolic process	GO:0006511	other cellular processes
AT3G46460	AT3G46460	ubiquitin-dependent protein catabolic process	GO:0006511	other metabolic processes
AT3G46460	AT3G46460	ubiquitin-dependent protein catabolic process	GO:0006511	protein metabolism
AT3G46460	AT3G46460	ubiquitin-dependent protein catabolic process	GO:0006511	other cellular processes
AT3G46460	AT3G46460	ubiquitin-dependent protein catabolic process	GO:0006511	other metabolic processes

Gene Network Informations
Gene Network	Interact with..
FPTEVCPM078_H01_PDNR-F[interact with..]	Not found!