Contig View

Back [Phalaenopsis Transcriptome]

Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
FPTEVCPM	FPTEVCPM071_C04_PDNR-F	1140

Contig Map:

(ProjectName=FPTEVCPM
SequenceName=NoContigFind):

Sequences View:[NoContigFind](Contig Seguence)

Sequences View:[FPTEVCPM071_C04_PDNR-F](Singleton Sequence)

FPTEVCPM071_C04_PDNR-F 1140  bases 
GGGAAGGAGGGCATATTTTTCTCGTTTTGAAGTCGCGAGAACGAGAAATCGCTGCATCTCTCGATCCTCAAAGCCCTAGCTCGTCTTCTGGGCTGAGGAAATGCGGAAGGTGTTCGTCCGTGTTTTCTTTCTCTTCTATCTCGGGACATGGGCGACGACTGCGAGGTCCGATATAGTAATTTCCAGGGTCGATCGACGGATTGATTTGACTTCGCACTTTGTACGAGTTCTATCTACTTTAAAGGTTGAGAATGCTGGACGTAATGTTGTCTCAGAGATTTTGCTGGCAATTCCTAATATGCAGGCAAAGAATTTGGCAAATTTGAAAGCATTTTACAATGAAGGAAAAGGAAAAGGTTCTGCCATTAACCTTCCAGTTTCGGAGGTTTACCCAGAGGGGATGCCCCATGAATTGACCTTCCACACCCTGTCATTAACTGAGGGTCTGGAGAAAGGGAAAAGCCTCTCTGTAAATGTTCTTACCATATTTACTCATTCCCTGCAGCCATTCCCTGAGGAAATCAGTCAAGCGGATGCCCAGCTTGTTGTTTATCAGGATAGTGCCTACTATTTATCACCCTATGTGGTGAAGTCTCAGTCGCTTAATGTTCTGCTACCTGGTGGACGGGTGGAATCATATACTAAACATCCCAGTGGAAAACTTGTAGACTCTGAAATTAAATATGGACCTTATGAGAAACTTCCTCCTTTCTCTTACTCGGCCATAGTTATTCATTTTGAAAACAATAATCCATTTGTGGTTGCTCAAGAATTAGTGAGGGAGATAGAGATTTCTCACTGGGGTAGCATACACGTAACTGAACACTACAACCTTGCCCACAAAGGGGCCACTAACAAAGGGGGCTTTTCTAGGCTTGATTACCAATCTAGATCATATATGGGAGGAGATCATCGCTTAGACACTCATGCTAGTGCACCACGAGCCCATTCTATTTATTATAGGATGACATTGGGACATCTCACATCTCATCTTTGGGGAGACTCTAGAAGACACAGCTGGAAATCGACTAGATTTCCTATATTTGGTGGATGGAGAACATCCTTTACCATGGCTACGCTTACTCTGCAAGATTTTTTTGTTTTATTTTCTGAGAGAAACCGGTTTCTGAACCATACACA

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
ref	NP_001151620.1	dolichyl-diphosphooligosaccharide--protein glycosyltransferase 67 kDasubunit	Zea mays	623	406 bits (1044)	e-111	205/344 (59%)	262/344 (76%), Gaps = 5/344 (1%)	+2

KEGG Pathway	GO
NoContigFind[2 Pathway]	NoContigFind[21 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Genetic Information Processing	Folding, Sorting and Degradation	04141	Protein processing in endoplasmic reticulum	[PATH:ath04141]	FPTEVCPM071_C04_PDNR-F	AT1G76400	FPTEVCPM
Metabolism	Glycan Biosynthesis and Metabolism	00510	N-Glycan biosynthesis	[PATH:ath00510]	FPTEVCPM071_C04_PDNR-F	AT1G76400	FPTEVCPM

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT1G76400	AT1G76400	membrane	GO:0016020	other membranes
AT1G76400	AT1G76400	dolichyl-diphosphooligosaccharide-protein glycotransferase activity	GO:0004579	transferase activity
AT1G76400	AT1G76400	protein glycosylation	GO:0006486	protein metabolism
AT1G76400	AT1G76400	protein glycosylation	GO:0006486	other cellular processes
AT1G76400	AT1G76400	protein glycosylation	GO:0006486	other metabolic processes
AT1G76400	AT1G76400	endoplasmic reticulum	GO:0005783	ER
AT1G76400	AT1G76400	oligosaccharyl transferase activity	GO:0004576	transferase activity
AT1G76400	AT1G76400	membrane	GO:0016020	other membranes
AT1G76400	AT1G76400	dolichyl-diphosphooligosaccharide-protein glycotransferase activity	GO:0004579	transferase activity
AT1G76400	AT1G76400	protein glycosylation	GO:0006486	protein metabolism
AT1G76400	AT1G76400	protein glycosylation	GO:0006486	other cellular processes
AT1G76400	AT1G76400	protein glycosylation	GO:0006486	other metabolic processes
AT1G76400	AT1G76400	endoplasmic reticulum	GO:0005783	ER
AT1G76400	AT1G76400	oligosaccharyl transferase activity	GO:0004576	transferase activity
AT1G76400	AT1G76400	membrane	GO:0016020	other membranes
AT1G76400	AT1G76400	dolichyl-diphosphooligosaccharide-protein glycotransferase activity	GO:0004579	transferase activity
AT1G76400	AT1G76400	protein glycosylation	GO:0006486	protein metabolism
AT1G76400	AT1G76400	protein glycosylation	GO:0006486	other cellular processes
AT1G76400	AT1G76400	protein glycosylation	GO:0006486	other metabolic processes
AT1G76400	AT1G76400	endoplasmic reticulum	GO:0005783	ER
AT1G76400	AT1G76400	oligosaccharyl transferase activity	GO:0004576	transferase activity

Gene Network Informations
Gene Network	Interact with..
FPTEVCPM071_C04_PDNR-F[interact with..]	FPTEVCPM071_C04_PDNR-F FPTEVCPM025_G03_PDNR-F

Query Name	Length of query	GenBank	Accession number(Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
FPTEVCPM071_C04_PDNR-F	1140	ref	NP_001151620.1	dolichyl-diphosphooligosaccharide--protein glycosyltransferase 67 kDasubunit	Zea mays	623	406 bits (1044)	e-111	205/344 (59%)	262/344 (76%), Gaps = 5/344 (1%)	+2
FPTEVCPM025_G03_PDNR-F	1061	ref	NP_001059165.1	Os07g0209000	Oryza sativa (japonica cultivar-group)	439	449 bits (1154)	e-136	223/303 (73%)	256/303 (84%), Gaps = 1/303 (0%)	+3