Contig View

Back [Phalaenopsis Transcriptome]

Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
FEICP	EICPM025_H11_pDNR-F	1035

Contig Map:

(ProjectName=FEICP
SequenceName=NoContigFind):

Sequences View:[NoContigFind](Contig Seguence)

Sequences View:[EICPM025_H11_pDNR-F](Singleton Sequence)

EICPM025_H11_pDNR-F 1035  bases 
TACTGCATATGTGCGGGATTCGGCCATTACGGCCGGGGGCCCAATTTCTAATGCATCTCTTGATGTTGGGAAAGTTGCCGGTCAGATGAGGATCGTTCCATGGGAGTGACAGAGGGCGCCACCCTCGTTCGGATATGGGGAGAAATTGTGCTTGCTTGCAACATGAATACGCCTATAAATTACGTTTTATGCCCCGGACACTTTCTTGCAAAGGACGAAAATATCTACTCATTCTTCGAGCCAGACCTCCCATCCGAACCCTTAGCCTGCTCCAAATCAAAAACTTGTTCTATTTTCAAATCATCTGCCGAGAAGAGGAACGCAAGGAAGCCTTCCAACGTCAACTGATCCCTGAAAGTATCTCATGTACGGAACCTCAAGGGCTCCTTTTCATTGGAAAGAGGCGCTTCGTCCTCATCTTCTTCATCATCGCCATCATCCCCATCTCTATCATCCTCTTCCTCCAACCCCTCCCACAATAATAACAATCTAAACCCCTGGAAATCGGCTCAAGACACCTCTTCCTGGCACGAAGGATTCTCCGTGCTCGATCTCATTGGTGACAACTACTTCTCCTGCGCTGACGGAAGGAAGCGGTCTGACCGCGAGGTACCTTCTCAACTCCTCAGAGGACATCGTGCTGTTTTTGAAGGAATCACCGGAGTCATGCACCCCACATGTTAATGTCAATCCTAACGCCCTCTTCTCGCATGCTGACAGGATGAGATGATAGGGATTGTAGTACAGAACGCGTCGAGCGCGCCCCCCCCGTTTGACTGTGAAGAGAAAGCTTGTTTTATTACAAGCACTGTTTTTGTGTGAAAGGGGCTTTGGAGGTATGGGGCATTCTTAGGTGTGCTATAATGCTTTATATCTTATGTGTAATTCATAATGACAGTCACGGTTGATTTAGTCACGCTATGTGCATAATGGATAGGTGTGGGCTATTCTTATTGCACAGAGATGATTCTACTTCGAGTGATTTGGCTTGTCTGGCCGCTCTCAGTCTTCTGCAAGCTTTCTAGAACAATACGT

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
gb	ABF70084.1	trehalose-6-phosphate synthase, putative	Musa balbisiana	969	145 bits (366)	3e-36	80/178 (44%)	106/178 (59%)	+1

KEGG Pathway	GO
NoContigFind[1 Pathway]	NoContigFind[10 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Metabolism	Carbohydrate Metabolism	00500	Starch and sucrose metabolism	[PATH:ath00500]	EICPM025_H11_pDNR-F	AT1G78580	FEICP

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT1G78580	AT1G78580	cytoplasm	GO:0005737	other cytoplasmic components
AT1G78580	AT1G78580	"alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity"	GO:0003825	transferase activity
AT1G78580	AT1G78580	trehalose metabolic process	GO:0005991	other cellular processes
AT1G78580	AT1G78580	trehalose metabolic process	GO:0005991	other metabolic processes
AT1G78580	AT1G78580	plant-type cell wall biogenesis	GO:0009832	cell organization and biogenesis
AT1G78580	AT1G78580	embryo development	GO:0009790	developmental processes
AT1G78580	AT1G78580	embryo development ending in seed dormancy	GO:0009793	developmental processes
AT1G78580	AT1G78580	sugar mediated signaling pathway	GO:0010182	other biological processes
AT1G78580	AT1G78580	"transferase activity, transferring glycosyl groups"	GO:0016757	transferase activity
AT1G78580	AT1G78580	cell division	GO:0051301	other cellular processes

Gene Network Informations
Gene Network	Interact with..
EICPM025_H11_pDNR-F[interact with..]	EICPM044_E08_pDNR-F EICPS048_E11_pDNR-F EICPM025_H11_pDNR-F

Query Name	Length of query	GenBank	Accession number(Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
EICPM044_E08_pDNR-F	1048	gb	ABI48954.1	putative protein translation factor Sui1	Viola baoshanensis	113	57.8 bits (138)	6e-16	30/53 (56%)	38/53 (71%)	+3
EICPS048_E11_pDNR-F	739	gb	ACF06581.1	translational initiation factor eIF1	Elaeis guineensis	113	170 bits (430)	2e-40	87/113 (76%)	95/113 (84%)	+2
EICPM025_H11_pDNR-F	1035	gb	ABF70084.1	trehalose-6-phosphate synthase, putative	Musa balbisiana	969	145 bits (366)	3e-36	80/178 (44%)	106/178 (59%)	+1