Contig View

Back [Phalaenopsis Transcriptome]

Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
FAECPM	Contig0606	1001

Contig Map:

(ProjectName=FAECPM SequenceName=Contig0606):
FAECPM035_F07_PDNR-F:
FAECPM013_E08_PDNRF:
FAECPM019_G01_PDNR-F:

Sequences View:[Contig0606](Contig Seguence)

1001 bases 
ACAGCCCGCTACTCAGGACCTGTACGATTCTATTGCCGCCGGTAACTACCCGGAGTGGAAGCTCTTTGTTCAGGTTATGGATCCAGACCAAGAGGACCGCTACGACTTTGATCCCCTTGATGACACCAAGACGTGGCCGGAGGACATCCTGCCACTCCAGCCGGTTGGCCGACTTGTGTTCAACCGAAACATTGATAATTTCTTTGCAGAGAATGAGCAGCTGGCATTCGGTCCAGGTCTGGTTGTGCCAGGCATATACTACTCCGATGACAAAATGCTTCAGTGCAGGGTGTTTGCTTATGCGGACACCCAGCGTTATCGCCTGGGCCCAAATTATCTCATGCTACCCGTCAATGCACCCAAATGCGCTTTTCATAATAATCATTATGATGGCGCCATGAACTTCATGCAGAGGACTGAGGAGGTGGATTATTACCCTTCAAGGCATGCTCCCCTGAGGCATGCAGACAGGGTTCCTATTCCGTTGCGCCCACTTAGAGGAAAGCGTGAGAAGATCATAATTGAGAAACAAAATGATTTCAAGCAATCAGGGGTGAGATACAGAAGCTGGGCTCCTGATAGGCAGGAGAGGTTCATTCGTCGCTGGGTTGAGGCTTTGGGACATCCCAAGGTTAGCCATGAGCTCAGGAGTATCTGGGTCGGCTATCTGACTCAGTGCGACGGTACTCTGGGACAGAAGGTTGGCAGCAACCTCAATGTGAAGCCGAACATGTAATGATGTTAATGTGAAGGTAAAGCAGACCAAGCACCCAATAAAGAATATGAGCTTCTTCAGCCCTTTAGAATAAGGCCAAGTACCATGTAGCCATCTTGATCATATAAGAAATCTTCAATGCTTGAAGTTTCTTTGTTCTTGTTTGCTTTTGTGGTGTGGTTTGATAAATGAACAATGTTGGAATTAATCATGTAGAATATCATTGGGCAATGCATTTGAGTGTAATAGTTGATTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Sequences View:[Contig0606](Singleton Sequence)

Contig0606 1001  bases 
ACAGCCCGCTACTCAGGACCTGTACGATTCTATTGCCGCCGGTAACTACCCGGAGTGGAAGCTCTTTGTTCAGGTTATGGATCCAGACCAAGAGGACCGCTACGACTTTGATCCCCTTGATGACACCAAGACGTGGCCGGAGGACATCCTGCCACTCCAGCCGGTTGGCCGACTTGTGTTCAACCGAAACATTGATAATTTCTTTGCAGAGAATGAGCAGCTGGCATTCGGTCCAGGTCTGGTTGTGCCAGGCATATACTACTCCGATGACAAAATGCTTCAGTGCAGGGTGTTTGCTTATGCGGACACCCAGCGTTATCGCCTGGGCCCAAATTATCTCATGCTACCCGTCAATGCACCCAAATGCGCTTTTCATAATAATCATTATGATGGCGCCATGAACTTCATGCAGAGGACTGAGGAGGTGGATTATTACCCTTCAAGGCATGCTCCCCTGAGGCATGCAGACAGGGTTCCTATTCCGTTGCGCCCACTTAGAGGAAAGCGTGAGAAGATCATAATTGAGAAACAAAATGATTTCAAGCAATCAGGGGTGAGATACAGAAGCTGGGCTCCTGATAGGCAGGAGAGGTTCATTCGTCGCTGGGTTGAGGCTTTGGGACATCCCAAGGTTAGCCATGAGCTCAGGAGTATCTGGGTCGGCTATCTGACTCAGTGCGACGGTACTCTGGGACAGAAGGTTGGCAGCAACCTCAATGTGAAGCCGAACATGTAATGATGTTAATGTGAAGGTAAAGCAGACCAAGCACCCAATAAAGAATATGAGCTTCTTCAGCCCTTTAGAATAAGGCCAAGTACCATGTAGCCATCTTGATCATATAAGAAATCTTCAATGCTTGAAGTTTCTTTGTTCTTGTTTGCTTTTGTGGTGTGGTTTGATAAATGAACAATGTTGGAATTAATCATGTAGAATATCATTGGGCAATGCATTTGAGTGTAATAGTTGATTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
gb	ACF06566.1	catalase 2	Elaeis guineensis	492	460 bits (1183)	e-127	213/242 (88%)	225/242 (92%)	+2

KEGG Pathway	GO
Contig0606[2 Pathway]	Contig0606[132 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Cellular Processes	Transport and Catabolism	04146	Peroxisome	[PATH:ath04146]	Contig0606	AT4G35090	FAECPM
Metabolism	Amino Acid Metabolism	00380	Tryptophan metabolism	[PATH:ath00380]	Contig0606	AT4G35090	FAECPM

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT4G35090	AT4G35090	mitochondrion	GO:0005739	mitochondria
AT4G35090	AT4G35090	peroxisome	GO:0005777	other cytoplasmic components
AT4G35090	AT4G35090	peroxisome	GO:0005777	other intracellular components
AT4G35090	AT4G35090	peroxisome	GO:0005777	other cytoplasmic components
AT4G35090	AT4G35090	peroxisome	GO:0005777	other intracellular components
AT4G35090	AT4G35090	catalase activity	GO:0004096	other enzyme activity
AT4G35090	AT4G35090	catalase activity	GO:0004096	other enzyme activity
AT4G35090	AT4G35090	catalase activity	GO:0004096	other enzyme activity
AT4G35090	AT4G35090	protein binding	GO:0005515	protein binding
AT4G35090	AT4G35090	cell death	GO:0008219	other cellular processes
AT4G35090	AT4G35090	response to cold	GO:0009409	response to stress
AT4G35090	AT4G35090	response to cold	GO:0009409	response to stress
AT4G35090	AT4G35090	response to cold	GO:0009409	response to abiotic or biotic stimulus
AT4G35090	AT4G35090	response to cold	GO:0009409	response to abiotic or biotic stimulus
AT4G35090	AT4G35090	response to light stimulus	GO:0009416	response to abiotic or biotic stimulus
AT4G35090	AT4G35090	cellular response to nitrogen starvation	GO:0006995	response to stress
AT4G35090	AT4G35090	cellular response to nitrogen starvation	GO:0006995	other cellular processes
AT4G35090	AT4G35090	response to oxidative stress	GO:0006979	response to stress
AT4G35090	AT4G35090	cellular response to phosphate starvation	GO:0016036	response to stress
AT4G35090	AT4G35090	cellular response to phosphate starvation	GO:0016036	other cellular processes
AT4G35090	AT4G35090	photoperiodism	GO:0009648	response to abiotic or biotic stimulus
AT4G35090	AT4G35090	cell redox homeostasis	GO:0045454	other cellular processes
AT4G35090	AT4G35090	cellular response to sulfate starvation	GO:0009970	response to stress
AT4G35090	AT4G35090	cellular response to sulfate starvation	GO:0009970	other cellular processes
AT4G35090	AT4G35090	hydrogen peroxide catabolic process	GO:0042744	response to stress
AT4G35090	AT4G35090	hydrogen peroxide catabolic process	GO:0042744	other cellular processes
AT4G35090	AT4G35090	hydrogen peroxide catabolic process	GO:0042744	other metabolic processes
AT4G35090	AT4G35090	cobalt ion binding	GO:0050897	other binding
AT4G35090	AT4G35090	stromule	GO:0010319	plastid
AT4G35090	AT4G35090	stromule	GO:0010319	other cytoplasmic components
AT4G35090	AT4G35090	stromule	GO:0010319	other intracellular components
AT4G35090	AT4G35090	chloroplast	GO:0009507	chloroplast
AT4G35090	AT4G35090	peroxisome	GO:0005777	other cytoplasmic components
AT4G35090	AT4G35090	peroxisome	GO:0005777	other intracellular components
AT4G35090	AT4G35090	cytosolic ribosome	GO:0022626	cytosol
AT4G35090	AT4G35090	cytosolic ribosome	GO:0022626	ribosome
AT4G35090	AT4G35090	cytosolic ribosome	GO:0022626	other cytoplasmic components
AT4G35090	AT4G35090	cytosolic ribosome	GO:0022626	other intracellular components
AT4G35090	AT4G35090	peroxisome	GO:0005777	other cytoplasmic components
AT4G35090	AT4G35090	peroxisome	GO:0005777	other intracellular components
AT4G35090	AT4G35090	cytosolic ribosome	GO:0022626	cytosol
AT4G35090	AT4G35090	cytosolic ribosome	GO:0022626	ribosome
AT4G35090	AT4G35090	cytosolic ribosome	GO:0022626	other cytoplasmic components
AT4G35090	AT4G35090	cytosolic ribosome	GO:0022626	other intracellular components
AT4G35090	AT4G35090	mitochondrion	GO:0005739	mitochondria
AT4G35090	AT4G35090	peroxisome	GO:0005777	other cytoplasmic components
AT4G35090	AT4G35090	peroxisome	GO:0005777	other intracellular components
AT4G35090	AT4G35090	peroxisome	GO:0005777	other cytoplasmic components
AT4G35090	AT4G35090	peroxisome	GO:0005777	other intracellular components
AT4G35090	AT4G35090	catalase activity	GO:0004096	other enzyme activity
AT4G35090	AT4G35090	catalase activity	GO:0004096	other enzyme activity
AT4G35090	AT4G35090	catalase activity	GO:0004096	other enzyme activity
AT4G35090	AT4G35090	protein binding	GO:0005515	protein binding
AT4G35090	AT4G35090	cell death	GO:0008219	other cellular processes
AT4G35090	AT4G35090	response to cold	GO:0009409	response to stress
AT4G35090	AT4G35090	response to cold	GO:0009409	response to stress
AT4G35090	AT4G35090	response to cold	GO:0009409	response to abiotic or biotic stimulus
AT4G35090	AT4G35090	response to cold	GO:0009409	response to abiotic or biotic stimulus
AT4G35090	AT4G35090	response to light stimulus	GO:0009416	response to abiotic or biotic stimulus
AT4G35090	AT4G35090	cellular response to nitrogen starvation	GO:0006995	response to stress
AT4G35090	AT4G35090	cellular response to nitrogen starvation	GO:0006995	other cellular processes
AT4G35090	AT4G35090	response to oxidative stress	GO:0006979	response to stress
AT4G35090	AT4G35090	cellular response to phosphate starvation	GO:0016036	response to stress
AT4G35090	AT4G35090	cellular response to phosphate starvation	GO:0016036	other cellular processes
AT4G35090	AT4G35090	photoperiodism	GO:0009648	response to abiotic or biotic stimulus
AT4G35090	AT4G35090	cell redox homeostasis	GO:0045454	other cellular processes
AT4G35090	AT4G35090	cellular response to sulfate starvation	GO:0009970	response to stress
AT4G35090	AT4G35090	cellular response to sulfate starvation	GO:0009970	other cellular processes
AT4G35090	AT4G35090	hydrogen peroxide catabolic process	GO:0042744	response to stress
AT4G35090	AT4G35090	hydrogen peroxide catabolic process	GO:0042744	other cellular processes
AT4G35090	AT4G35090	hydrogen peroxide catabolic process	GO:0042744	other metabolic processes
AT4G35090	AT4G35090	cobalt ion binding	GO:0050897	other binding
AT4G35090	AT4G35090	stromule	GO:0010319	plastid
AT4G35090	AT4G35090	stromule	GO:0010319	other cytoplasmic components
AT4G35090	AT4G35090	stromule	GO:0010319	other intracellular components
AT4G35090	AT4G35090	chloroplast	GO:0009507	chloroplast
AT4G35090	AT4G35090	peroxisome	GO:0005777	other cytoplasmic components
AT4G35090	AT4G35090	peroxisome	GO:0005777	other intracellular components
AT4G35090	AT4G35090	cytosolic ribosome	GO:0022626	cytosol
AT4G35090	AT4G35090	cytosolic ribosome	GO:0022626	ribosome
AT4G35090	AT4G35090	cytosolic ribosome	GO:0022626	other cytoplasmic components
AT4G35090	AT4G35090	cytosolic ribosome	GO:0022626	other intracellular components
AT4G35090	AT4G35090	peroxisome	GO:0005777	other cytoplasmic components
AT4G35090	AT4G35090	peroxisome	GO:0005777	other intracellular components
AT4G35090	AT4G35090	cytosolic ribosome	GO:0022626	cytosol
AT4G35090	AT4G35090	cytosolic ribosome	GO:0022626	ribosome
AT4G35090	AT4G35090	cytosolic ribosome	GO:0022626	other cytoplasmic components
AT4G35090	AT4G35090	cytosolic ribosome	GO:0022626	other intracellular components
AT4G35090	AT4G35090	mitochondrion	GO:0005739	mitochondria
AT4G35090	AT4G35090	peroxisome	GO:0005777	other cytoplasmic components
AT4G35090	AT4G35090	peroxisome	GO:0005777	other intracellular components
AT4G35090	AT4G35090	peroxisome	GO:0005777	other cytoplasmic components
AT4G35090	AT4G35090	peroxisome	GO:0005777	other intracellular components
AT4G35090	AT4G35090	catalase activity	GO:0004096	other enzyme activity
AT4G35090	AT4G35090	catalase activity	GO:0004096	other enzyme activity
AT4G35090	AT4G35090	catalase activity	GO:0004096	other enzyme activity
AT4G35090	AT4G35090	protein binding	GO:0005515	protein binding
AT4G35090	AT4G35090	cell death	GO:0008219	other cellular processes
AT4G35090	AT4G35090	response to cold	GO:0009409	response to stress
AT4G35090	AT4G35090	response to cold	GO:0009409	response to stress
AT4G35090	AT4G35090	response to cold	GO:0009409	response to abiotic or biotic stimulus
AT4G35090	AT4G35090	response to cold	GO:0009409	response to abiotic or biotic stimulus
AT4G35090	AT4G35090	response to light stimulus	GO:0009416	response to abiotic or biotic stimulus
AT4G35090	AT4G35090	cellular response to nitrogen starvation	GO:0006995	response to stress
AT4G35090	AT4G35090	cellular response to nitrogen starvation	GO:0006995	other cellular processes
AT4G35090	AT4G35090	response to oxidative stress	GO:0006979	response to stress
AT4G35090	AT4G35090	cellular response to phosphate starvation	GO:0016036	response to stress
AT4G35090	AT4G35090	cellular response to phosphate starvation	GO:0016036	other cellular processes
AT4G35090	AT4G35090	photoperiodism	GO:0009648	response to abiotic or biotic stimulus
AT4G35090	AT4G35090	cell redox homeostasis	GO:0045454	other cellular processes
AT4G35090	AT4G35090	cellular response to sulfate starvation	GO:0009970	response to stress
AT4G35090	AT4G35090	cellular response to sulfate starvation	GO:0009970	other cellular processes
AT4G35090	AT4G35090	hydrogen peroxide catabolic process	GO:0042744	response to stress
AT4G35090	AT4G35090	hydrogen peroxide catabolic process	GO:0042744	other cellular processes
AT4G35090	AT4G35090	hydrogen peroxide catabolic process	GO:0042744	other metabolic processes
AT4G35090	AT4G35090	cobalt ion binding	GO:0050897	other binding
AT4G35090	AT4G35090	stromule	GO:0010319	plastid
AT4G35090	AT4G35090	stromule	GO:0010319	other cytoplasmic components
AT4G35090	AT4G35090	stromule	GO:0010319	other intracellular components
AT4G35090	AT4G35090	chloroplast	GO:0009507	chloroplast
AT4G35090	AT4G35090	peroxisome	GO:0005777	other cytoplasmic components
AT4G35090	AT4G35090	peroxisome	GO:0005777	other intracellular components
AT4G35090	AT4G35090	cytosolic ribosome	GO:0022626	cytosol
AT4G35090	AT4G35090	cytosolic ribosome	GO:0022626	ribosome
AT4G35090	AT4G35090	cytosolic ribosome	GO:0022626	other cytoplasmic components
AT4G35090	AT4G35090	cytosolic ribosome	GO:0022626	other intracellular components
AT4G35090	AT4G35090	peroxisome	GO:0005777	other cytoplasmic components
AT4G35090	AT4G35090	peroxisome	GO:0005777	other intracellular components
AT4G35090	AT4G35090	cytosolic ribosome	GO:0022626	cytosol
AT4G35090	AT4G35090	cytosolic ribosome	GO:0022626	ribosome
AT4G35090	AT4G35090	cytosolic ribosome	GO:0022626	other cytoplasmic components
AT4G35090	AT4G35090	cytosolic ribosome	GO:0022626	other intracellular components

Gene Network Informations
Gene Network	Interact with..
Contig0606[interact with..]	FAECPM014_H09_PDNR-F Contig0606

Query Name	Length of query	GenBank	Accession number(Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
FAECPM014_H09_PDNR-F	885	gb	ACG47588.1	60S ribosomal protein L7a	Zea mays	255	380 bits (977)	e-104	187/216 (86%)	194/216 (89%)	+2
Contig0606	1001	gb	ACF06566.1	catalase 2	Elaeis guineensis	492	460 bits (1183)	e-127	213/242 (88%)	225/242 (92%)	+2