Contig View

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Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
454	FXQQ4OB01BU5A1	241

Contig Map:

(ProjectName=454
SequenceName=NoContigFind):

Sequences View:[NoContigFind](Contig Seguence)

Sequences View:[FXQQ4OB01BU5A1](Singleton Sequence)

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
ref	XP_002326095.1	predicted protein	Populus trichocarpa	233	100 bits (249)	5e-20	51/72 (70%)	58/72 (80%)	-1

KEGG Pathway	GO
NoContigFind[1 Pathway]	NoContigFind[11 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Genetic Information Processing	Transcription	03040	Spliceosome	[PATH:ath03040]	FXQQ4OB01BU5A1	AT2G30260	454

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT2G30260	AT2G30260	nucleic acid binding	GO:0003676	nucleic acid binding
AT2G30260	AT2G30260	nucleotide binding	GO:0000166	nucleotide binding
AT2G30260	AT2G30260	Cajal body	GO:0015030	nucleus
AT2G30260	AT2G30260	Cajal body	GO:0015030	other intracellular components
AT2G30260	AT2G30260	cytoplasm	GO:0005737	other cytoplasmic components
AT2G30260	AT2G30260	nucleoplasm	GO:0005654	nucleus
AT2G30260	AT2G30260	nucleoplasm	GO:0005654	other intracellular components
AT2G30260	AT2G30260	RNA binding	GO:0003723	DNA or RNA binding
AT2G30260	AT2G30260	cis assembly of pre-catalytic spliceosome	GO:0000354	other cellular processes
AT2G30260	AT2G30260	cis assembly of pre-catalytic spliceosome	GO:0000354	other metabolic processes
AT2G30260	AT2G30260	cis assembly of pre-catalytic spliceosome	GO:0000354	cell organization and biogenesis

Gene Network Informations
Gene Network	Interact with..
FXQQ4OB01BU5A1[interact with..]	contig01118 FXQQ4OB01AHJ51 FXQQ4OB01BPOIG FXQQ4OB01C5ELI FXQQ4OB01CLAR5 FXQQ4OB01EKGRS FXQQ4OB02HNDG5 contig06725 FXQQ4OB02G9N6A contig01466 contig03465 contig04581 contig05309 FXQQ4OB01DLNVD FXQQ4OB02FZ1YV FXQQ4OB01BU5A1

Query Name	Length of query	GenBank	Accession number(Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
contig01118	424	emb	CAO68741.1	unnamed protein product	Vitis vinifera	320	129 bits (325)	2e-31	69/106 (65%)	74/106 (69%)	-1
FXQQ4OB01AHJ51	241	dbj	BAF14435.2	Os04g0348300	Oryza sativa Japonica Group	769	82.4 bits (202)	1e-14	42/71 (59%)	51/71 (71%)	-2
FXQQ4OB01BPOIG	239	ref	XP_002521973.1	cell division control protein, putative	Ricinus communis	1049	85.9 bits (211)	5e-20	40/57 (70%)	50/57 (87%)	-1
FXQQ4OB01C5ELI	240	gb	ABU49591.1	CDC5-like protein	Solanum lycopersicum	987	130 bits (326)	6e-29	63/79 (79%)	71/79 (89%)	+3
FXQQ4OB01CLAR5	240	dbj	BAF14435.2	Os04g0348300	Oryza sativa Japonica Group	769	95.1 bits (235)	2e-18	47/80 (58%)	60/80 (75%)	-1
FXQQ4OB01EKGRS	240	dbj	BAF14435.2	Os04g0348300	Oryza sativa Japonica Group	769	95.1 bits (235)	2e-18	47/80 (58%)	60/80 (75%)	-1
FXQQ4OB02HNDG5	239	emb	CAD40345.2	OSJNBa0020I02.14	Oryza sativa (japonica cultivar-group)	985	72.4 bits (176)	4e-14	37/66 (56%)	45/66 (68%)	-3
contig06725	476	emb	CAO47893.1	unnamed protein product	Vitis vinifera	280	189 bits (479)	2e-72	88/103 (85%)	97/103 (94%), Gaps = 1/103 (0%)	-2
FXQQ4OB02G9N6A	253	emb	CAO47892.1	unnamed protein product	Vitis vinifera	76	97.1 bits (240)	6e-19	42/45 (93%)	44/45 (97%)	+3
contig01466	885	gb	AAF73016.1	AF262934_1 ubiquitin conjugating protein	Avicennia marina	152	319 bits (818)	2e-85	151/152 (99%)	152/152 (100%)	-1
contig03465	765	gb	ACN50179.1	ubiquitin carrier-like protein	Annona cherimola	152	308 bits (790)	3e-82	145/152 (95%)	148/152 (97%)	+3
contig04581	394	gb	ABF99294.1	Ubiquitin-conjugating enzyme E2-17 kDa, putative, expressed	Oryza sativa (japonica cultivar-group)	149	142 bits (358)	1e-32	64/65 (98%)	65/65 (100%)	-2
contig05309	313	gb	ACN50179.1	ubiquitin carrier-like protein	Annona cherimola	152	132 bits (333)	9e-30	64/64 (100%)	64/64 (100%)	+1
FXQQ4OB01DLNVD	238	gb	ACN50179.1	ubiquitin carrier-like protein	Annona cherimola	152	116 bits (290)	3e-34	51/56 (91%)	53/56 (94%)	-3
FXQQ4OB02FZ1YV	238	gb	ACN50179.1	ubiquitin carrier-like protein	Annona cherimola	152	116 bits (290)	3e-34	51/56 (91%)	53/56 (94%)	-3
FXQQ4OB01BU5A1	241	ref	XP_002326095.1	predicted protein	Populus trichocarpa	233	100 bits (249)	5e-20	51/72 (70%)	58/72 (80%)	-1