Contig View

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Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
454	FXQQ4OB01BTWB8	250

Contig Map:

(ProjectName=454
SequenceName=NoContigFind):

Sequences View:[NoContigFind](Contig Seguence)

Sequences View:[FXQQ4OB01BTWB8](Singleton Sequence)

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
ref	NP_001068563.1	Os11g0708500	Oryza sativa (japonica cultivar-group)	363	160 bits (405)	4e-38	77/83 (92%)	82/83 (98%)	+1

KEGG Pathway	GO
NoContigFind[1 Pathway]	NoContigFind[24 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Metabolism	Metabo lism of Cofactors and Vitamins	00750	Vitamin B6 metabolism	[PATH:ath00750]	FXQQ4OB01BTWB8	AT5G01410	454

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT5G01410	AT5G01410	cytosol	GO:0005829	cytosol
AT5G01410	AT5G01410	plasma membrane	GO:0005886	plasma membrane
AT5G01410	AT5G01410	cellular amino acid metabolic process	GO:0006520	other cellular processes
AT5G01410	AT5G01410	cellular amino acid metabolic process	GO:0006520	other metabolic processes
AT5G01410	AT5G01410	chlorophyll metabolic process	GO:0015994	other cellular processes
AT5G01410	AT5G01410	chlorophyll metabolic process	GO:0015994	other metabolic processes
AT5G01410	AT5G01410	response to oxidative stress	GO:0006979	response to stress
AT5G01410	AT5G01410	pyridoxine biosynthetic process	GO:0008615	other cellular processes
AT5G01410	AT5G01410	pyridoxine biosynthetic process	GO:0008615	other metabolic processes
AT5G01410	AT5G01410	response to absence of light	GO:0009646	response to abiotic or biotic stimulus
AT5G01410	AT5G01410	response to lipid hydroperoxide	GO:0006982	response to stress
AT5G01410	AT5G01410	response to salt stress	GO:0009651	response to stress
AT5G01410	AT5G01410	response to salt stress	GO:0009651	response to abiotic or biotic stimulus
AT5G01410	AT5G01410	response to stress	GO:0006950	response to stress
AT5G01410	AT5G01410	endomembrane system	GO:0012505	other cellular components
AT5G01410	AT5G01410	hyperosmotic salinity response	GO:0042538	response to stress
AT5G01410	AT5G01410	hyperosmotic salinity response	GO:0042538	response to abiotic or biotic stimulus
AT5G01410	AT5G01410	protein homodimerization activity	GO:0042803	protein binding
AT5G01410	AT5G01410	protein heterodimerization activity	GO:0046982	protein binding
AT5G01410	AT5G01410	vitamin B6 biosynthetic process	GO:0042819	other cellular processes
AT5G01410	AT5G01410	vitamin B6 biosynthetic process	GO:0042819	other metabolic processes
AT5G01410	AT5G01410	response to UV-B	GO:0010224	response to abiotic or biotic stimulus
AT5G01410	AT5G01410	response to non-ionic osmotic stress	GO:0010335	response to stress
AT5G01410	AT5G01410	response to non-ionic osmotic stress	GO:0010335	response to abiotic or biotic stimulus

Gene Network Informations
Gene Network	Interact with..
FXQQ4OB01BTWB8[interact with..]	contig03150 contig00930 contig03780 contig08028 FXQQ4OB01D3ZAC FXQQ4OB02GL2JE contig03278 FXQQ4OB01CS251 FXQQ4OB02F9ORD contig06673 FXQQ4OB01BTWB8 FXQQ4OB01ESHBI

Query Name	Length of query	GenBank	Accession number(Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
contig03150	748	ref	XP_002285871.1	PREDICTED: similar to PBC1 (20S proteasome beta subunit C1); peptidase isoform 1	Vitis vinifera	204	340 bits (873)	6e-92	163/182 (89%)	179/182 (98%)	+1
contig00930	398	gb	ACG48499.1	40S ribosomal protein S5	Zea mays	199	121 bits (303)	3e-26	62/62 (100%)	62/62 (100%)	+3
contig03780	470	ref	XP_002531594.1	40S ribosomal protein S5, putative	Ricinus communis	211	242 bits (618)	8e-63	118/148 (79%)	132/148 (89%)	+2
contig08028	418	gb	ACG48499.1	40S ribosomal protein S5	Zea mays	199	121 bits (303)	3e-26	62/62 (100%)	62/62 (100%)	-3
FXQQ4OB01D3ZAC	255	ref	XP_002275005.1	PREDICTED: similar to ribonuclease P family protein	Vitis vinifera	300	92.4 bits (228)	1e-17	44/84 (52%)	59/84 (70%)	+2
FXQQ4OB02GL2JE	244	ref	XP_002275005.1	PREDICTED: similar to ribonuclease P family protein	Vitis vinifera	300	83.2 bits (204)	2e-17	39/50 (78%)	43/50 (86%)	+1
contig03278	315	ref	XP_002529920.1	dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase, putative	Ricinus communis	469	160 bits (404)	6e-38	82/105 (78%)	90/105 (85%), Gaps = 2/105 (1%)	-2
FXQQ4OB01CS251	252	ref	XP_002524184.1	aconitase, putative	Ricinus communis	997	157 bits (397)	3e-37	76/83 (91%)	82/83 (98%)	-3
FXQQ4OB02F9ORD	238	ref	XP_002524184.1	aconitase, putative	Ricinus communis	997	144 bits (362)	4e-33	67/79 (84%)	73/79 (92%)	+1
contig06673	245	gb	AAZ94411.1	pyridoxine biosynthesis protein	Triticum aestivum	314	114 bits (286)	3e-24	57/62 (91%)	60/62 (96%)	+3
FXQQ4OB01BTWB8	250	ref	NP_001068563.1	Os11g0708500	Oryza sativa (japonica cultivar-group)	363	160 bits (405)	4e-38	77/83 (92%)	82/83 (98%)	+1
FXQQ4OB01ESHBI	246	gb	ABS72029.1	putative SNZ1 protein	Olea europaea	196	117 bits (293)	4e-25	59/81 (72%)	64/81 (79%)	+2