Contig View

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Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
454	FXQQ4OB01D3ZAC	255

Contig Map:

(ProjectName=454
SequenceName=NoContigFind):

Sequences View:[NoContigFind](Contig Seguence)

Sequences View:[FXQQ4OB01D3ZAC](Singleton Sequence)

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
ref	XP_002275005.1	PREDICTED: similar to ribonuclease P family protein	Vitis vinifera	300	92.4 bits (228)	1e-17	44/84 (52%)	59/84 (70%)	+2

KEGG Pathway	GO
NoContigFind[1 Pathway]	NoContigFind[53 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Genetic Information Processing	Translation	03013	RNA transport	[PATH:ath03013]	FXQQ4OB01D3ZAC	AT2G43190	454

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT2G43190	AT2G43190	ribonuclease MRP complex	GO:0000172	other intracellular components
AT2G43190	AT2G43190	nucleolar ribonuclease P complex	GO:0005655	nucleus
AT2G43190	AT2G43190	nucleolar ribonuclease P complex	GO:0005655	other intracellular components
AT2G43190	AT2G43190	RNA binding	GO:0003723	DNA or RNA binding
AT2G43190	AT2G43190	ribonuclease activity	GO:0004540	hydrolase activity
AT2G43190	AT2G43190	mRNA cleavage	GO:0006379	other cellular processes
AT2G43190	AT2G43190	mRNA cleavage	GO:0006379	other metabolic processes
AT2G43190	AT2G43190	rRNA processing	GO:0006364	other cellular processes
AT2G43190	AT2G43190	rRNA processing	GO:0006364	other metabolic processes
AT2G43190	AT2G43190	rRNA processing	GO:0006364	cell organization and biogenesis
AT2G43190	AT2G43190	tRNA processing	GO:0008033	other cellular processes
AT2G43190	AT2G43190	tRNA processing	GO:0008033	other metabolic processes
AT2G43190	AT2G43190	ribonuclease P complex	GO:0030677	other intracellular components
AT2G43190	AT2G43190	ribonuclease P activity	GO:0004526	hydrolase activity
AT2G43190	AT2G43190	ribonuclease MRP complex	GO:0000172	other intracellular components
AT2G43190	AT2G43190	nucleolar ribonuclease P complex	GO:0005655	nucleus
AT2G43190	AT2G43190	nucleolar ribonuclease P complex	GO:0005655	other intracellular components
AT2G43190	AT2G43190	RNA binding	GO:0003723	DNA or RNA binding
AT2G43190	AT2G43190	ribonuclease activity	GO:0004540	hydrolase activity
AT2G43190	AT2G43190	mRNA cleavage	GO:0006379	other cellular processes
AT2G43190	AT2G43190	mRNA cleavage	GO:0006379	other metabolic processes
AT2G43190	AT2G43190	rRNA processing	GO:0006364	other cellular processes
AT2G43190	AT2G43190	rRNA processing	GO:0006364	other metabolic processes
AT2G43190	AT2G43190	rRNA processing	GO:0006364	cell organization and biogenesis
AT2G43190	AT2G43190	tRNA processing	GO:0008033	other cellular processes
AT2G43190	AT2G43190	tRNA processing	GO:0008033	other metabolic processes
AT2G43190	AT2G43190	ribonuclease P complex	GO:0030677	other intracellular components
AT2G43190	AT2G43190	ribonuclease MRP complex	GO:0000172	other intracellular components
AT2G43190	AT2G43190	nucleolar ribonuclease P complex	GO:0005655	nucleus
AT2G43190	AT2G43190	nucleolar ribonuclease P complex	GO:0005655	other intracellular components
AT2G43190	AT2G43190	RNA binding	GO:0003723	DNA or RNA binding
AT2G43190	AT2G43190	ribonuclease activity	GO:0004540	hydrolase activity
AT2G43190	AT2G43190	mRNA cleavage	GO:0006379	other cellular processes
AT2G43190	AT2G43190	mRNA cleavage	GO:0006379	other metabolic processes
AT2G43190	AT2G43190	rRNA processing	GO:0006364	other cellular processes
AT2G43190	AT2G43190	rRNA processing	GO:0006364	other metabolic processes
AT2G43190	AT2G43190	rRNA processing	GO:0006364	cell organization and biogenesis
AT2G43190	AT2G43190	tRNA processing	GO:0008033	other cellular processes
AT2G43190	AT2G43190	tRNA processing	GO:0008033	other metabolic processes
AT2G43190	AT2G43190	ribonuclease P complex	GO:0030677	other intracellular components
AT2G43190	AT2G43190	ribonuclease MRP complex	GO:0000172	other intracellular components
AT2G43190	AT2G43190	nucleolar ribonuclease P complex	GO:0005655	nucleus
AT2G43190	AT2G43190	nucleolar ribonuclease P complex	GO:0005655	other intracellular components
AT2G43190	AT2G43190	RNA binding	GO:0003723	DNA or RNA binding
AT2G43190	AT2G43190	ribonuclease activity	GO:0004540	hydrolase activity
AT2G43190	AT2G43190	mRNA cleavage	GO:0006379	other cellular processes
AT2G43190	AT2G43190	mRNA cleavage	GO:0006379	other metabolic processes
AT2G43190	AT2G43190	rRNA processing	GO:0006364	other cellular processes
AT2G43190	AT2G43190	rRNA processing	GO:0006364	other metabolic processes
AT2G43190	AT2G43190	rRNA processing	GO:0006364	cell organization and biogenesis
AT2G43190	AT2G43190	tRNA processing	GO:0008033	other cellular processes
AT2G43190	AT2G43190	tRNA processing	GO:0008033	other metabolic processes
AT2G43190	AT2G43190	ribonuclease P complex	GO:0030677	other intracellular components

Gene Network Informations
Gene Network	Interact with..
FXQQ4OB01D3ZAC[interact with..]	FXQQ4OB02HKN2C FXQQ4OB01DP0RD FXQQ4OB01CS3KY FXQQ4OB01CBX48 FXQQ4OB02GEAXW FXQQ4OB01D3ZAC FXQQ4OB02GL2JE

Query Name	Length of query	GenBank	Accession number(Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
FXQQ4OB02HKN2C	228	emb	CAO16656.1	unnamed protein product	Vitis vinifera	2224	102 bits (254)	1e-20	50/72 (69%)	58/72 (80%), Gaps = 1/72 (1%)	+3
FXQQ4OB01DP0RD	239	gb	AAK44144.2	AF370329_1 putative fructokinase	Arabidopsis thaliana	227	115 bits (287)	2e-24	56/78 (71%)	67/78 (85%)	+3
FXQQ4OB01CS3KY	247	ref	NP_001062984.1	Os09g0361500	Oryza sativa (japonica cultivar-group)	377	51.6 bits (122)	7e-13	22/29 (75%)	26/29 (89%)	+3
FXQQ4OB01CBX48	259	ref	NP_001151070.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	Zea mays	321	54.7 bits (130)	9e-08	24/32 (75%)	28/32 (87%)	+2
FXQQ4OB02GEAXW	247	ref	NP_001147695.1	LOC100281305	Zea mays	318	132 bits (333)	9e-30	66/81 (81%)	73/81 (90%)	+3
FXQQ4OB01D3ZAC	255	ref	XP_002275005.1	PREDICTED: similar to ribonuclease P family protein	Vitis vinifera	300	92.4 bits (228)	1e-17	44/84 (52%)	59/84 (70%)	+2
FXQQ4OB02GL2JE	244	ref	XP_002275005.1	PREDICTED: similar to ribonuclease P family protein	Vitis vinifera	300	83.2 bits (204)	2e-17	39/50 (78%)	43/50 (86%)	+1