Home
About OrchidBase
Orchid in Wikipedia
Development and Goals
Database Statistics
Characteristics of orchid species
Contact
Orchid Genome (
New!
)
Phalaenopsis equestris
Dendrobium catenatum
Apostasia shenzhenica
Transcriptome
Phalaenopsis Transcriptome
Orchidaceae Floral Transcriptome
Tools (
New!
)
Download (
New!
)
Help
back
Select Library
Phalaenopsis
Dendrobium
Apostasia
Query Name:
Annotation:
Species:
Select Page
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
Genome (In the following table, column 2 (Gene ID) is unique number as identifier for each of predicted genes. Column 3 (Gene Location) shows the location of the gene on the scaffold. Annotation information from column 4 (GenBank) to column 12 (Identity) is obtained from BLAST results.)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
...
Library Name
Gene ID
Gene Location
Gene Expression
GenBank
Accession number(Best hits in the GenBank)
Annotation
Species
Score
Expect value
Identities
Frame
KEGG Pathway
GOTerm
Interpro
Swissprot
TrEMBL
Apostasia
Ash004250
Ash004250
Ash004250
ref
XP_007029910.1
ARF GAP-like zinc finger-containing protein ZIGA4, putative isoform 3
Theobroma cacao
539
0.0
46.22%
+1
AT1G08680[no pathway]
6 Go Term
3 IPR Term
Q8RXE7
M0TXM1
Apostasia
Ash004251
Ash004251
Ash004251
ref
XP_006829857.1
PREDICTED: chaperone protein dnaJ 20, chloroplastic
Amborella trichopoda
86.7
2e-19
34.36%
-1
AT4G13830[no pathway]
5 Go Term
2 IPR Term
Q9SDN0
M0SWK4
Apostasia
Ash004252
Ash004252
Ash004252
ref
XP_007205614.1
hypothetical protein PRUPE_ppa009101mg
Prunus persica
391
3e-134
63.27%
-1
AT2G24190[1 pathway(s)]
4 Go Term
1 IPR Term
A4UHT7
M5WC17
Apostasia
Ash004253
Ash004253
Ash004253
ref
XP_007051877.1
NAD(P)-binding Rossmann-fold superfamily protein
Theobroma cacao
401
5e-130
40.29%
-1
AT1G01800[no pathway]
3 Go Term
1 IPR Term
A4UHT7
M0SXV0
Apostasia
Ash004254
Ash004254
Ash004254
ref
NP_001060679.1
Os07g0685800
Oryza sativa Japonica Group
72.0
2e-13
32.81%
+1
AT5G51030[no pathway]
1 Go Term
1 IPR Term
No hit
B9S6K7
Apostasia
Ash004255
Ash004255
Ash004255
gb
ERM97258.1
hypothetical protein AMTR_s00119p00110100
Amborella trichopoda
393
9e-135
62.50%
-1
AT2G24190[1 pathway(s)]
6 Go Term
1 IPR Term
A4UHT7
A5AJE0
Apostasia
Ash004256
Ash004256
Ash004256
ref
XP_004144091.1
PREDICTED: (+)-neomenthol dehydrogenase-like
Cucumis sativus
378
5e-129
64.24%
-1
AT3G61220[1 pathway(s)]
6 Go Term
1 IPR Term
Q9M2E2
A5AJE0
Apostasia
Ash004257
Ash004257
Ash004257
ref
XP_006339214.1
PREDICTED: protein PHYTOCHROME KINASE SUBSTRATE 4-like
Solanum tuberosum
194
3e-53
35.99%
+1
AT5G04190[no pathway]
3 Go Term
1 IPR Term
Q9FYE2
M1CPY8
Apostasia
Ash004258
Ash004258
Ash004258
ref
XP_006383369.1
hypothetical protein POPTR_0005s14930g
Populus trichocarpa
223
2e-60
33.41%
-1
AT3G14470[no pathway]
4 Go Term
2 IPR Term
Q9LRR4
M0RV91
Apostasia
Ash004259
Ash004259
Ash004259
gb
EAY93952.1
hypothetical protein OsI_15725
Oryza sativa Indica Group
188
5e-59
55.49%
-1
AT4G08685[no pathway]
2 Go Term
1 IPR Term
P33050
A2XSZ2
Apostasia
Ash004260
Ash004260
Ash004260
* No hits found *
* No hits found *
*No hits found*
*No hits found*
*No hits found*
*No hits found*
*No hits found*
+1
No hit
4 Go Term
1 IPR Term
No hit
M0RHQ9
Apostasia
Ash004261
Ash004261
Ash004261
ref
XP_006481594.1
PREDICTED: mediator of RNA polymerase II transcription subunit 27-like
Citrus sinensis
471
8e-161
53.09%
-1
AT3G09180[no pathway]
No hit
1 IPR Term
Q8RWM3
M0SD67
Apostasia
Ash004262
Ash004262
Ash004262
emb
CAN72399.1
hypothetical protein VITISV_041203
Vitis vinifera
288
3e-94
53.60%
-1
AT3G13410[no pathway]
4 Go Term
1 IPR Term
No hit
A5BJ31
Apostasia
Ash004263
Ash004263
Ash004263
* No hits found *
* No hits found *
*No hits found*
*No hits found*
*No hits found*
*No hits found*
*No hits found*
-1
No hit
4 Go Term
1 IPR Term
No hit
No hit
Apostasia
Ash004264
Ash004264
Ash004264
gb
ABU40775.1
NAC-like protein 3
Crocus sativus
311
5e-102
54.43%
-1
AT5G07680[no pathway]
4 Go Term
2 IPR Term
Q9FLJ2
M0T5A9
Apostasia
Ash004265
Ash004265
Ash004265
ref
XP_002461229.1
hypothetical protein SORBIDRAFT_02g043220
Sorghum bicolor
258
5e-83
68.54%
-1
AT2G39050[no pathway]
4 Go Term
2 IPR Term
No hit
M0TC25
Apostasia
Ash004266
Ash004266
Ash004266
ref
XP_002461230.1
hypothetical protein SORBIDRAFT_02g043230
Sorghum bicolor
256
9e-83
65.95%
-1
AT2G39050[no pathway]
4 Go Term
2 IPR Term
No hit
M0TC25
Apostasia
Ash004267
Ash004267
Ash004267
dbj
BAF36563.1
NAC domain protein
Cymbidium hybrid cultivar
420
5e-145
64.22%
-1
AT3G04070[no pathway]
6 Go Term
2 IPR Term
O49255
A0JBY8
Apostasia
Ash004268
Ash004268
Ash004268
gb
AEQ94175.1
NAC protein 1
Elaeis guineensis
347
4e-118
76.47%
+1
AT1G77450[no pathway]
5 Go Term
2 IPR Term
Q52QH4
M0TC27
Apostasia
Ash004269
Ash004269
Ash004269
ref
XP_006428146.1
hypothetical protein CICLE_v10026247mg
Citrus clementina
157
2e-43
44.02%
+1
AT1G74390[no pathway]
No hit
1 IPR Term
No hit
M0TSF0
Apostasia
Ash004270
Ash004270
Ash004270
gb
AEJ72569.1
putative reverse transcriptase family member
Malus domestica
133
1e-37
55.37%
-1
No hit
5 Go Term
2 IPR Term
No hit
G0XZC9
Apostasia
Ash004271
Ash004271
Ash004271
dbj
BAJ93181.1
predicted protein
Hordeum vulgare subsp. vulgare
382
3e-121
46.61%
+1
AT3G51950[no pathway]
2 Go Term
3 IPR Term
Q0D3J9
B9FUX6
Apostasia
Ash004272
Ash004272
Ash004272
ref
XP_004137665.1
PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770 isoform X1
Cucumis sativus
1241
0.0
64.00%
+1
AT1G79620[no pathway]
7 Go Term
3 IPR Term
Q9LT96
M0SD75
Apostasia
Ash004273
Ash004273
Ash004273
ref
XP_004137383.1
PREDICTED: L-ascorbate oxidase homolog
Cucumis sativus
607
0.0
62.96%
+1
AT1G55560[no pathway]
1 Go Term
2 IPR Term
Q00624
M0TNZ1
Apostasia
Ash004274
Ash004274
Ash004274
ref
NP_001055876.2
Os05g0485800
Oryza sativa Japonica Group
166
3e-52
79.38%
+1
AT3G13400[no pathway]
No hit
1 IPR Term
P29162
Q0DH83
Apostasia
Ash004275
Ash004275
Ash004275
ref
XP_002441280.1
hypothetical protein SORBIDRAFT_09g023760
Sorghum bicolor
629
0.0
49.54%
+1
AT2G38650[1 pathway(s)]
No hit
1 IPR Term
Q9ZVI7
C5YZW0
Apostasia
Ash004276
Ash004276
Ash004276
ref
XP_002269188.1
PREDICTED: protein LURP-one-related 8
Vitis vinifera
241
4e-73
59.90%
+1
AT2G38640[no pathway]
1 Go Term
2 IPR Term
Q9ZVI6
M0TC32
Apostasia
Ash004277
Ash004277
Ash004277
ref
XP_006842622.1
PREDICTED: uncharacterized protein LOC18432456
Amborella trichopoda
164
3e-48
46.63%
+1
AT3G54200[no pathway]
3 Go Term
1 IPR Term
No hit
M0SWI5
Apostasia
Ash004278
Ash004278
Ash004278
gb
ERN04280.1
hypothetical protein AMTR_s00077p00170260
Amborella trichopoda
1037
0.0
75.82%
+1
AT5G58270[1 pathway(s)]
5 Go Term
3 IPR Term
Q9LVM1
B9T3V9
Apostasia
Ash004279
Ash004279
Ash004279
ref
XP_007033460.1
NADH dehydrogenase
ubiquinone
110
5e-30
81.36%
+1
AT3G08610[1 pathway(s)]
2 Go Term
1 IPR Term
Q9C9Z5
H6U811
Apostasia
Ash004280
Ash004280
Ash004280
ref
XP_004968323.1
PREDICTED: myosin heavy chain, cardiac muscle isoform-like isoform X2
Setaria italica
340
4e-108
44.07%
+1
AT2G30500[no pathway]
No hit
1 IPR Term
No hit
K3XGE4
Apostasia
Ash004281
Ash004281
Ash004281
* No hits found *
* No hits found *
*No hits found*
*No hits found*
*No hits found*
*No hits found*
*No hits found*
+1
No hit
No hit
No hit
No hit
No hit
Apostasia
Ash004282
Ash004282
Ash004282
ref
NP_001173188.1
Os02g0804150, partial
Oryza sativa Japonica Group
122
2e-35
98.36%
-1
AT5G56670[1 pathway(s)]
No hit
2 IPR Term
P49689
I1J9W0
Apostasia
Ash004283
Ash004283
Ash004283
dbj
BAK07790.1
predicted protein
Hordeum vulgare subsp. vulgare
583
0.0
73.98%
+1
AT2G40760[no pathway]
No hit
2 IPR Term
Q1JPN0
M0XX40
Apostasia
Ash004284
Ash004284
Ash004284
ref
XP_004984462.1
PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At3g28040-like
Setaria italica
1248
0.0
65.29%
+1
AT3G56370[no pathway]
7 Go Term
4 IPR Term
Q9LRT1
K4A5D6
Apostasia
Ash004285
Ash004285
Ash004285
ref
XP_002299179.1
cysteine protease inhibitor family protein
Populus trichocarpa
144
6e-42
61.34%
+1
AT3G12490[no pathway]
4 Go Term
2 IPR Term
Q8H0X6
B3TLW7
Apostasia
Ash004286
Ash004286
Ash004286
ref
XP_010659056.1
PREDICTED: 65-kDa microtubule-associated protein 5 isoform X1
Vitis vinifera
617
0.0
57.45%
+1
AT2G38720[no pathway]
7 Go Term
2 IPR Term
Q9ZVJ3
M0U143
Apostasia
Ash004287
Ash004287
Ash004287
ref
XP_006648285.1
PREDICTED: uncharacterized protein LOC102721051
Oryza brachyantha
328
4e-104
47.33%
+1
AT5G05240[no pathway]
3 Go Term
1 IPR Term
No hit
M0SD98
Apostasia
Ash004288
Ash004288
Ash004288
ref
XP_007043275.1
MRNA splicing factor isoform 1
Theobroma cacao
286
4e-97
82.56%
+1
AT5G08290[1 pathway(s)]
2 Go Term
2 IPR Term
No hit
F8RWT4
Apostasia
Ash004289
Ash004289
Ash004289
* No hits found *
* No hits found *
*No hits found*
*No hits found*
*No hits found*
*No hits found*
*No hits found*
-1
No hit
2 Go Term
1 IPR Term
No hit
No hit
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
...