Contig View

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Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
FPTEVCPM	FPTEVCPM069_G10_PDNR-F	448

Contig Map:

(ProjectName=FPTEVCPM
SequenceName=NoContigFind):

Sequences View:[NoContigFind](Contig Seguence)

Sequences View:[FPTEVCPM069_G10_PDNR-F](Singleton Sequence)

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
gb	ABA40430.1	ribosomal protein L27a-like protein	Solanum tuberosum	148	92.8 bits (229)	1e-17	51/77 (66%)	54/77 (70%)	+1

KEGG Pathway	GO
NoContigFind[1 Pathway]	NoContigFind[26 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Genetic Information Processing	Translation	03010	Ribosome	[PATH:ath03010]	FPTEVCPM069_G10_PDNR-F	AT1G23290	FPTEVCPM

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT1G23290	AT1G23290	nucleolus	GO:0005730	nucleus
AT1G23290	AT1G23290	nucleolus	GO:0005730	other intracellular components
AT1G23290	AT1G23290	structural constituent of ribosome	GO:0003735	structural molecule activity
AT1G23290	AT1G23290	cytosolic ribosome	GO:0022626	cytosol
AT1G23290	AT1G23290	cytosolic ribosome	GO:0022626	ribosome
AT1G23290	AT1G23290	cytosolic ribosome	GO:0022626	other cytoplasmic components
AT1G23290	AT1G23290	cytosolic ribosome	GO:0022626	other intracellular components
AT1G23290	AT1G23290	large ribosomal subunit	GO:0015934	ribosome
AT1G23290	AT1G23290	large ribosomal subunit	GO:0015934	other cytoplasmic components
AT1G23290	AT1G23290	large ribosomal subunit	GO:0015934	other intracellular components
AT1G23290	AT1G23290	ribosome	GO:0005840	ribosome
AT1G23290	AT1G23290	structural constituent of ribosome	GO:0003735	structural molecule activity
AT1G23290	AT1G23290	translation	GO:0006412	protein metabolism
AT1G23290	AT1G23290	translation	GO:0006412	protein metabolism
AT1G23290	AT1G23290	translation	GO:0006412	other cellular processes
AT1G23290	AT1G23290	translation	GO:0006412	other metabolic processes
AT1G23290	AT1G23290	translation	GO:0006412	other cellular processes
AT1G23290	AT1G23290	translation	GO:0006412	other metabolic processes
AT1G23290	AT1G23290	cytosolic large ribosomal subunit	GO:0022625	cytosol
AT1G23290	AT1G23290	cytosolic large ribosomal subunit	GO:0022625	ribosome
AT1G23290	AT1G23290	cytosolic large ribosomal subunit	GO:0022625	other cytoplasmic components
AT1G23290	AT1G23290	cytosolic large ribosomal subunit	GO:0022625	other intracellular components
AT1G23290	AT1G23290	cytosolic ribosome	GO:0022626	cytosol
AT1G23290	AT1G23290	cytosolic ribosome	GO:0022626	ribosome
AT1G23290	AT1G23290	cytosolic ribosome	GO:0022626	other cytoplasmic components
AT1G23290	AT1G23290	cytosolic ribosome	GO:0022626	other intracellular components

Gene Network Informations
Gene Network	Interact with..
FPTEVCPM069_G10_PDNR-F[interact with..]	Contig1208 FPTEVCPM046_H03_PDNR-F

Query Name	Length of query	GenBank	Accession number(Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
Contig1208	793	gb	ABA40430.1	ribosomal protein L27a-like protein	Solanum tuberosum	148	253 bits (645)	2e-65	122/149 (81%)	126/149 (84%)	+2
FPTEVCPM046_H03_PDNR-F	802	ref	XP_002309256.1	predicted protein	Populus trichocarpa	146	264 bits (675)	6e-69	127/149 (85%)	133/149 (89%)	+3