Contig View

Back [Phalaenopsis Transcriptome]

Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
FPTEVCPM	FPTEVCPM068_C03_PDNR-F	1102

Contig Map:

(ProjectName=FPTEVCPM
SequenceName=NoContigFind):

Sequences View:[NoContigFind](Contig Seguence)

Sequences View:[FPTEVCPM068_C03_PDNR-F](Singleton Sequence)

FPTEVCPM068_C03_PDNR-F 1102  bases 
GGTAAAGGAGCCTCTGCGGTTGGCCTTACAGCAGCCGTTCACAAGGATCCTGTTACAAGAGAATGGACACTAGAAGGAGGTGCTCTAGTCTTAGCTGACAGAGGGATATGTCTCATTGATGAGTTTGACAAAATGAATGATCAGGACAGAGTTAGTATTCATGAAGCCATGGAGCAGCAAAGTATCAGCATATCTAAAGCAGGCATTGTGACTTCTCTTCAAGCCCGGTGTAGCGTCATATCTGCGGCGAATCCAATTGGTGGAAGATATGATTCGTCCAAGACATTTTCGCAAAATGTGGAGTTAACCGATCCAATAATTTCTCGGTTTGATATCCTGTGTGTTGTGAAGGACATTGCTGATCCAGTAGTTGACGAAATGCTTGCAAAGTTTGTTGTTGATAGCCATGCCAGGTCACAACCAAAGGGTGGAAACATAGAAGACAAAGCTGCAAGCAACTCCCAGGATGATTCACAGAGTTCAGAAAGAACAGCAGATCCTGATGTACTTACACAAGATATGCTCAAGAAGTACATAACGTATGCAAAATTAAATGTTTTTCCAAAGTTACACGATGCAGATTTGAACAAGCTTACTCATGTATATGCAGAGTTGCGGAGAGAGTCGTCTCACGGACAAGGAGTCCCGATTGCTGTGAGGCATATTGAGTCGATGATAAGAATGTCCGAAGCTCACGCCAGAATGCATTTAAGGAGTTATGTGACGCAGGAAGATGTGGACATGGCTATTCGGGTTTTGCTAGATTCTTTCATCTCCACGCAAAAATTTGGCGTTCAGAAAGCCCTACAGAAGAGATTTAAAAAGTACATGACATTTAAGAGGGATTACAATGAGCTTCTTCTGCATCTATTGCGTGTGCTAATGAAGGATGCAATGCATTTTGAGGAACTCTTGGCTGGGCCAGCTGCTCACCTCACTCATATGGAGGTGAAGTGGAAGAACTTAAAACAAGGCACAAGAGTATGAAATTATGATCTGAAACCATTCTTTTCGAGCGCAAATTTTGTAACAGCAACTTTGTTCTGATGAGCCCGGGGTGTGATCAGAACACCCACTTGCTAGCTAATGTCCGGGTAACTTG

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
gb	AAS68103.1	minichromosomal maintenance factor	Triticum aestivum	955	560 bits (1444)	e-158	284/360 (78%)	318/360 (88%), Gaps = 2/360 (0%)	+1

KEGG Pathway	GO
NoContigFind[1 Pathway]	NoContigFind[17 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Genetic Information Processing	Replication and Repair	03030	DNA replication	[PATH:ath03030]	FPTEVCPM068_C03_PDNR-F	AT1G44900	FPTEVCPM

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT1G44900	AT1G44900	ATP binding	GO:0005524	nucleotide binding
AT1G44900	AT1G44900	DNA binding	GO:0003677	DNA or RNA binding
AT1G44900	AT1G44900	ATP binding	GO:0005524	nucleotide binding
AT1G44900	AT1G44900	DNA binding	GO:0003677	DNA or RNA binding
AT1G44900	AT1G44900	DNA-dependent ATPase activity	GO:0008094	hydrolase activity
AT1G44900	AT1G44900	DNA-dependent DNA replication initiation	GO:0006270	DNA or RNA metabolism
AT1G44900	AT1G44900	DNA unwinding involved in replication	GO:0006268	DNA or RNA metabolism
AT1G44900	AT1G44900	cell proliferation	GO:0008283	other cellular processes
AT1G44900	AT1G44900	cell proliferation	GO:0008283	other cellular processes
AT1G44900	AT1G44900	regulation of cell proliferation	GO:0042127	other cellular processes
AT1G44900	AT1G44900	embryo development	GO:0009790	developmental processes
AT1G44900	AT1G44900	nuclear chromatin	GO:0000790	nucleus
AT1G44900	AT1G44900	nuclear chromatin	GO:0000790	other intracellular components
AT1G44900	AT1G44900	regulation of root meristem growth	GO:0010082	developmental processes
AT1G44900	AT1G44900	root development	GO:0048364	developmental processes
AT1G44900	AT1G44900	ATP binding	GO:0005524	nucleotide binding
AT1G44900	AT1G44900	DNA binding	GO:0003677	DNA or RNA binding

Gene Network Informations
Gene Network	Interact with..
FPTEVCPM068_C03_PDNR-F[interact with..]	FPTEVCPM068_C03_PDNR-F

Query Name	Length of query	GenBank	Accession number(Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
FPTEVCPM068_C03_PDNR-F	1102	gb	AAS68103.1	minichromosomal maintenance factor	Triticum aestivum	955	560 bits (1444)	e-158	284/360 (78%)	318/360 (88%), Gaps = 2/360 (0%)	+1