Contig View

Back [Phalaenopsis Transcriptome]

Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
FPTEVCPM	FPTEVCPM022_G11_PDNR-F	579

Contig Map:

(ProjectName=FPTEVCPM
SequenceName=NoContigFind):

Sequences View:[NoContigFind](Contig Seguence)

Sequences View:[FPTEVCPM022_G11_PDNR-F](Singleton Sequence)

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
dbj	BAF14435.2	Os04g0348300	Oryza sativa Japonica Group	769	275 bits (703)	2e-72	136/172 (79%)	152/172 (88%), Gaps = 2/172 (1%)	+3

KEGG Pathway	GO
NoContigFind[1 Pathway]	NoContigFind[13 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Genetic Information Processing	Transcription	03040	Spliceosome	[PATH:ath03040]	FPTEVCPM022_G11_PDNR-F	AT1G09770	FPTEVCPM

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT1G09770	AT1G09770	chloroplast	GO:0009507	chloroplast
AT1G09770	AT1G09770	DNA binding	GO:0003677	DNA or RNA binding
AT1G09770	AT1G09770	sequence-specific DNA binding transcription factor activity	GO:0003700	transcription factor activity
AT1G09770	AT1G09770	sequence-specific DNA binding transcription factor activity	GO:0003700	transcription factor activity
AT1G09770	AT1G09770	"defense response signaling pathway, resistance gene-dependent"	GO:0009870	response to stress
AT1G09770	AT1G09770	regulation of transcription	GO:0045449	transcription
AT1G09770	AT1G09770	regulation of transcription	GO:0045449	other cellular processes
AT1G09770	AT1G09770	regulation of transcription	GO:0045449	other metabolic processes
AT1G09770	AT1G09770	defense response to bacterium	GO:0042742	response to stress
AT1G09770	AT1G09770	defense response to bacterium	GO:0042742	response to abiotic or biotic stimulus
AT1G09770	AT1G09770	"defense response signaling pathway, resistance gene-independent"	GO:0010204	response to stress
AT1G09770	AT1G09770	defense response to fungus	GO:0050832	response to stress
AT1G09770	AT1G09770	defense response to fungus	GO:0050832	response to abiotic or biotic stimulus

Gene Network Informations
Gene Network	Interact with..
FPTEVCPM022_G11_PDNR-F[interact with..]	FPTEVCPM022_G11_PDNR-F

Query Name	Length of query	GenBank	Accession number(Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
FPTEVCPM022_G11_PDNR-F	579	dbj	BAF14435.2	Os04g0348300	Oryza sativa Japonica Group	769	275 bits (703)	2e-72	136/172 (79%)	152/172 (88%), Gaps = 2/172 (1%)	+3