Contig View

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Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
FPTEVCPM	Contig0286	1288

Contig Map:

(ProjectName=FPTEVCPM SequenceName=Contig0286):
FPTEVCPM034_A12_PDNR-F:
FPTEVCPM083_E09_PDNR-F:
FPTEVCPM051_B07_PDNR-F:

Sequences View:[Contig0286](Contig Seguence)

1288 bases 
GGACGACCAGAGCCACAAACTCGCGACGGGATCTCCCTGGAGAAGTTATCGTCTGGTGTCTGGTGCTGCGACGTGTGAAGAAGGAGATATCGTGAAGAAGGGCAGGAGTCCATATTTTGTTGGAATTCTCAGTGCAACCTAAAGGGCCGCTAGGGTTACAGAAGATAACGGAAAAATGTCGGGCCAGAGGCAGAGGCTGACCGTGGTGCCGACGGTGACGATGTTGGGCGTGATGAAGGCGCGGCTGGTCGGTGCGACCCGCGGCCACGCTCTCCTGAAGAAGAAGAGCGACGCCCTCACGGTTCAATTCCGCCAGATCCTTAAGAAAATAGTCTCCACAAAGGAGTCCATGGGCGACATCATGCGATCTTCCTCCTTCGCCCTCACGGAGGCCAAGTACGCTGCCGGTGAAAACATTAAACACGTAGTCTTGGAGTCCGTTCGCTCTGCGTCAGTCAAGGTTCGTTCTCGGCAGGAGAACGTTGCAGGTGTGAAGCTCCCTAAGTTTGAACACTTCACTGACTCTGCTGCTGACTCCAAGTCTTCTACTGACCTCACTGGCCTTGCTCGTGGTGGACAGCAGGTCCAGGCCTGCCGTGCCGCACACATCAAGGCAATTGAGGTTCTTGTTGAGCTTGCCTCTCTTCAGACCTCCTTTCTCACACTTGATGAGGCCATCAAGACTACCAACCGAAGGGTCAATGCGCTTGAGAATGTGGTCAAGCCCCGAATTGAGAATACAATCAGCTATATAAAGGGGGAACTTGACGAGCTAGAGAGAGAGGATTTCTTCAGGCTGAAGAAGATCCAGGGATATAAGAAGAGGGAGATAGAAAGGCAAACGCAGTCAGCTAAGCAGTTTGCAGAAGAGAAGCGTGTGGAAGAGATTTCTCTGCAGAAGGGGATATCTTTCCATTCTGCACATAATATGCTTGTTGCTGGGGCAGAGAAAGATGAGGACATCATTTTTTAATGGATACCTGATGTTTACTTGTTAGGTTGGATCCTGCAGCAGGGCAAAAGTTGCAGCTTGTATTTTACTCTGTCATGGATGCTCGTCTCTGTAATCTGTATGGATTCTTTTCTAGCTGGGTTATGGCATGTAATATTTTATTTTCCAAATCTTTCAAGAACCAAACACCACTTTAAATAATTTCATTTATGTATATCGTCAACTTATTGAATGTGTTCTTATTTTTCTATTTTGACAATTCTGTATTAAATTAATATTTGTGCTATTCTCAGATTGTAGAATCGTTATTACGGAAAAAAAAAAAAAAAAAAAAAA

Sequences View:[Contig0286](Singleton Sequence)

Contig0286 1288  bases 
GGACGACCAGAGCCACAAACTCGCGACGGGATCTCCCTGGAGAAGTTATCGTCTGGTGTCTGGTGCTGCGACGTGTGAAGAAGGAGATATCGTGAAGAAGGGCAGGAGTCCATATTTTGTTGGAATTCTCAGTGCAACCTAAAGGGCCGCTAGGGTTACAGAAGATAACGGAAAAATGTCGGGCCAGAGGCAGAGGCTGACCGTGGTGCCGACGGTGACGATGTTGGGCGTGATGAAGGCGCGGCTGGTCGGTGCGACCCGCGGCCACGCTCTCCTGAAGAAGAAGAGCGACGCCCTCACGGTTCAATTCCGCCAGATCCTTAAGAAAATAGTCTCCACAAAGGAGTCCATGGGCGACATCATGCGATCTTCCTCCTTCGCCCTCACGGAGGCCAAGTACGCTGCCGGTGAAAACATTAAACACGTAGTCTTGGAGTCCGTTCGCTCTGCGTCAGTCAAGGTTCGTTCTCGGCAGGAGAACGTTGCAGGTGTGAAGCTCCCTAAGTTTGAACACTTCACTGACTCTGCTGCTGACTCCAAGTCTTCTACTGACCTCACTGGCCTTGCTCGTGGTGGACAGCAGGTCCAGGCCTGCCGTGCCGCACACATCAAGGCAATTGAGGTTCTTGTTGAGCTTGCCTCTCTTCAGACCTCCTTTCTCACACTTGATGAGGCCATCAAGACTACCAACCGAAGGGTCAATGCGCTTGAGAATGTGGTCAAGCCCCGAATTGAGAATACAATCAGCTATATAAAGGGGGAACTTGACGAGCTAGAGAGAGAGGATTTCTTCAGGCTGAAGAAGATCCAGGGATATAAGAAGAGGGAGATAGAAAGGCAAACGCAGTCAGCTAAGCAGTTTGCAGAAGAGAAGCGTGTGGAAGAGATTTCTCTGCAGAAGGGGATATCTTTCCATTCTGCACATAATATGCTTGTTGCTGGGGCAGAGAAAGATGAGGACATCATTTTTTAATGGATACCTGATGTTTACTTGTTAGGTTGGATCCTGCAGCAGGGCAAAAGTTGCAGCTTGTATTTTACTCTGTCATGGATGCTCGTCTCTGTAATCTGTATGGATTCTTTTCTAGCTGGGTTATGGCATGTAATATTTTATTTTCCAAATCTTTCAAGAACCAAACACCACTTTAAATAATTTCATTTATGTATATCGTCAACTTATTGAATGTGTTCTTATTTTTCTATTTTGACAATTCTGTATTAAATTAATATTTGTGCTATTCTCAGATTGTAGAATCGTTATTACGGAAAAAAAAAAAAAAAAAAAAAA

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
ref	XP_002523036.1	ATP synthase subunit d, putative	Ricinus communis	261	399 bits (1026)	e-109	215/265 (81%)	228/265 (86%)	+2

KEGG Pathway	GO
Contig0286[2 Pathway]	Contig0286[60 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Cellular Processes	Transport and Catabolism	04145	Phagosome	[PATH:ath04145]	Contig0286	AT3G58730	FPTEVCPM
Metabolism	Energy Metabolism	00190	Oxidative phosphorylation	[PATH:ath00190]	Contig0286	AT3G58730	FPTEVCPM

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT3G58730	AT3G58730	membrane	GO:0016020	other membranes
AT3G58730	AT3G58730	plasma membrane	GO:0005886	plasma membrane
AT3G58730	AT3G58730	plasma membrane	GO:0005886	plasma membrane
AT3G58730	AT3G58730	vacuole	GO:0005773	other cytoplasmic components
AT3G58730	AT3G58730	vacuole	GO:0005773	other cytoplasmic components
AT3G58730	AT3G58730	vacuole	GO:0005773	other intracellular components
AT3G58730	AT3G58730	vacuole	GO:0005773	other intracellular components
AT3G58730	AT3G58730	ATP synthesis coupled proton transport	GO:0015986	transport
AT3G58730	AT3G58730	ATP synthesis coupled proton transport	GO:0015986	other cellular processes
AT3G58730	AT3G58730	ATP synthesis coupled proton transport	GO:0015986	other metabolic processes
AT3G58730	AT3G58730	ATP synthesis coupled proton transport	GO:0015986	electron transport or energy pathways
AT3G58730	AT3G58730	plant-type vacuole	GO:0000325	other cytoplasmic components
AT3G58730	AT3G58730	plant-type vacuole	GO:0000325	other intracellular components
AT3G58730	AT3G58730	"ATPase activity, coupled to transmembrane movement of substances"	GO:0042626	hydrolase activity
AT3G58730	AT3G58730	"ATPase activity, coupled to transmembrane movement of substances"	GO:0042626	transporter activity
AT3G58730	AT3G58730	"proton-transporting ATPase activity, rotational mechanism"	GO:0046961	hydrolase activity
AT3G58730	AT3G58730	"proton-transporting ATPase activity, rotational mechanism"	GO:0046961	transporter activity
AT3G58730	AT3G58730	vacuolar membrane	GO:0005774	other membranes
AT3G58730	AT3G58730	vacuolar membrane	GO:0005774	other cytoplasmic components
AT3G58730	AT3G58730	vacuolar membrane	GO:0005774	other intracellular components
AT3G58730	AT3G58730	membrane	GO:0016020	other membranes
AT3G58730	AT3G58730	plasma membrane	GO:0005886	plasma membrane
AT3G58730	AT3G58730	plasma membrane	GO:0005886	plasma membrane
AT3G58730	AT3G58730	vacuole	GO:0005773	other cytoplasmic components
AT3G58730	AT3G58730	vacuole	GO:0005773	other cytoplasmic components
AT3G58730	AT3G58730	vacuole	GO:0005773	other intracellular components
AT3G58730	AT3G58730	vacuole	GO:0005773	other intracellular components
AT3G58730	AT3G58730	ATP synthesis coupled proton transport	GO:0015986	transport
AT3G58730	AT3G58730	ATP synthesis coupled proton transport	GO:0015986	other cellular processes
AT3G58730	AT3G58730	ATP synthesis coupled proton transport	GO:0015986	other metabolic processes
AT3G58730	AT3G58730	ATP synthesis coupled proton transport	GO:0015986	electron transport or energy pathways
AT3G58730	AT3G58730	plant-type vacuole	GO:0000325	other cytoplasmic components
AT3G58730	AT3G58730	plant-type vacuole	GO:0000325	other intracellular components
AT3G58730	AT3G58730	"ATPase activity, coupled to transmembrane movement of substances"	GO:0042626	hydrolase activity
AT3G58730	AT3G58730	"ATPase activity, coupled to transmembrane movement of substances"	GO:0042626	transporter activity
AT3G58730	AT3G58730	"proton-transporting ATPase activity, rotational mechanism"	GO:0046961	hydrolase activity
AT3G58730	AT3G58730	"proton-transporting ATPase activity, rotational mechanism"	GO:0046961	transporter activity
AT3G58730	AT3G58730	vacuolar membrane	GO:0005774	other membranes
AT3G58730	AT3G58730	vacuolar membrane	GO:0005774	other cytoplasmic components
AT3G58730	AT3G58730	vacuolar membrane	GO:0005774	other intracellular components
AT3G58730	AT3G58730	membrane	GO:0016020	other membranes
AT3G58730	AT3G58730	plasma membrane	GO:0005886	plasma membrane
AT3G58730	AT3G58730	plasma membrane	GO:0005886	plasma membrane
AT3G58730	AT3G58730	vacuole	GO:0005773	other cytoplasmic components
AT3G58730	AT3G58730	vacuole	GO:0005773	other cytoplasmic components
AT3G58730	AT3G58730	vacuole	GO:0005773	other intracellular components
AT3G58730	AT3G58730	vacuole	GO:0005773	other intracellular components
AT3G58730	AT3G58730	ATP synthesis coupled proton transport	GO:0015986	transport
AT3G58730	AT3G58730	ATP synthesis coupled proton transport	GO:0015986	other cellular processes
AT3G58730	AT3G58730	ATP synthesis coupled proton transport	GO:0015986	other metabolic processes
AT3G58730	AT3G58730	ATP synthesis coupled proton transport	GO:0015986	electron transport or energy pathways
AT3G58730	AT3G58730	plant-type vacuole	GO:0000325	other cytoplasmic components
AT3G58730	AT3G58730	plant-type vacuole	GO:0000325	other intracellular components
AT3G58730	AT3G58730	"ATPase activity, coupled to transmembrane movement of substances"	GO:0042626	hydrolase activity
AT3G58730	AT3G58730	"ATPase activity, coupled to transmembrane movement of substances"	GO:0042626	transporter activity
AT3G58730	AT3G58730	"proton-transporting ATPase activity, rotational mechanism"	GO:0046961	hydrolase activity
AT3G58730	AT3G58730	"proton-transporting ATPase activity, rotational mechanism"	GO:0046961	transporter activity
AT3G58730	AT3G58730	vacuolar membrane	GO:0005774	other membranes
AT3G58730	AT3G58730	vacuolar membrane	GO:0005774	other cytoplasmic components
AT3G58730	AT3G58730	vacuolar membrane	GO:0005774	other intracellular components

Gene Network Informations
Gene Network	Interact with..
Contig0286[interact with..]	FPTEVCPM085_E10_PDNR-F Contig0232 FPTEVCPM027_G01_PDNR-F FPTEVCPM063_H06_PDNR-F FPTEVCPM076_F05_PDNR-F FPTEVCPM080_H04_PDNR-F

Query Name	Length of query	GenBank	Accession number(Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
FPTEVCPM085_E10_PDNR-F	1050	ref	XP_002509910.1	vacuolar ATP synthase subunit E, putative	Ricinus communis	230	367 bits (942)	1e-99	183/227 (80%)	207/227 (91%)	+3
Contig0232	846	gb	ACN50179.1	ubiquitin carrier-like protein	Annona cherimola	152	308 bits (790)	3e-82	145/152 (95%)	148/152 (97%)	+2
FPTEVCPM027_G01_PDNR-F	838	emb	CBI32005.1	unnamed protein product	Vitis vinifera	191	320 bits (821)	8e-86	153/160 (95%)	154/160 (96%)	+2
FPTEVCPM063_H06_PDNR-F	835	emb	CBI32005.1	unnamed protein product	Vitis vinifera	191	322 bits (824)	4e-86	153/153 (100%)	153/153 (100%)	+2
FPTEVCPM076_F05_PDNR-F	560	gb	ABC01903.1	ubiquitin carrier-like protein	Solanum tuberosum	152	223 bits (568)	6e-57	104/108 (96%)	106/108 (98%)	+2
FPTEVCPM080_H04_PDNR-F	813	emb	CBI32005.1	unnamed protein product	Vitis vinifera	191	320 bits (820)	1e-85	152/154 (98%)	153/154 (99%)	+2