Contig View

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Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
FPEAECP	FPEAECP006_C07_PDNR-F	639

Contig Map:

(ProjectName=FPEAECP
SequenceName=NoContigFind):

Sequences View:[NoContigFind](Contig Seguence)

Sequences View:[FPEAECP006_C07_PDNR-F](Singleton Sequence)

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
ref	XP_002267800.1	PREDICTED: hypothetical protein	Vitis vinifera	51	108 bits (270)	4e-22	49/51 (96%)	49/51 (96%)	+2

KEGG Pathway	GO
NoContigFind[3 Pathway]	NoContigFind[44 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Genetic Information Processing	Transcription	03020	RNA polymerase	[PATH:ath03020]	FPEAECP006_C07_PDNR-F	AT5G41010	FPEAECP
Metabolism	Nucleotide Metabolism	00230	Purine metabolism	[PATH:ath00230]	FPEAECP006_C07_PDNR-F	AT5G41010	FPEAECP
Metabolism	Nucleotide Metabolism	00240	Pyrimidine metabolism	[PATH:ath00240]	FPEAECP006_C07_PDNR-F	AT5G41010	FPEAECP

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT5G41010	AT5G41010	DNA binding	GO:0003677	DNA or RNA binding
AT5G41010	AT5G41010	DNA-directed RNA polymerase activity	GO:0003899	transferase activity
AT5G41010	AT5G41010	transcription	GO:0006350	transcription
AT5G41010	AT5G41010	"DNA-directed RNA polymerase II, core complex"	GO:0005665	nucleus
AT5G41010	AT5G41010	"DNA-directed RNA polymerase II, core complex"	GO:0005665	other intracellular components
AT5G41010	AT5G41010	nucleus	GO:0005634	nucleus
AT5G41010	AT5G41010	DNA binding	GO:0003677	DNA or RNA binding
AT5G41010	AT5G41010	DNA-directed RNA polymerase activity	GO:0003899	transferase activity
AT5G41010	AT5G41010	transcription	GO:0006350	transcription
AT5G41010	AT5G41010	DNA-directed RNA polymerase IV complex	GO:0000418	nucleus
AT5G41010	AT5G41010	DNA-directed RNA polymerase IV complex	GO:0000418	other intracellular components
AT5G41010	AT5G41010	DNA binding	GO:0003677	DNA or RNA binding
AT5G41010	AT5G41010	DNA-directed RNA polymerase activity	GO:0003899	transferase activity
AT5G41010	AT5G41010	transcription	GO:0006350	transcription
AT5G41010	AT5G41010	"DNA-directed RNA polymerase II, core complex"	GO:0005665	nucleus
AT5G41010	AT5G41010	"DNA-directed RNA polymerase II, core complex"	GO:0005665	other intracellular components
AT5G41010	AT5G41010	nucleus	GO:0005634	nucleus
AT5G41010	AT5G41010	DNA binding	GO:0003677	DNA or RNA binding
AT5G41010	AT5G41010	DNA-directed RNA polymerase activity	GO:0003899	transferase activity
AT5G41010	AT5G41010	transcription	GO:0006350	transcription
AT5G41010	AT5G41010	DNA-directed RNA polymerase IV complex	GO:0000418	nucleus
AT5G41010	AT5G41010	DNA-directed RNA polymerase IV complex	GO:0000418	other intracellular components
AT5G41010	AT5G41010	DNA binding	GO:0003677	DNA or RNA binding
AT5G41010	AT5G41010	DNA-directed RNA polymerase activity	GO:0003899	transferase activity
AT5G41010	AT5G41010	transcription	GO:0006350	transcription
AT5G41010	AT5G41010	"DNA-directed RNA polymerase II, core complex"	GO:0005665	nucleus
AT5G41010	AT5G41010	"DNA-directed RNA polymerase II, core complex"	GO:0005665	other intracellular components
AT5G41010	AT5G41010	nucleus	GO:0005634	nucleus
AT5G41010	AT5G41010	DNA binding	GO:0003677	DNA or RNA binding
AT5G41010	AT5G41010	DNA-directed RNA polymerase activity	GO:0003899	transferase activity
AT5G41010	AT5G41010	transcription	GO:0006350	transcription
AT5G41010	AT5G41010	DNA-directed RNA polymerase IV complex	GO:0000418	nucleus
AT5G41010	AT5G41010	DNA-directed RNA polymerase IV complex	GO:0000418	other intracellular components
AT5G41010	AT5G41010	DNA binding	GO:0003677	DNA or RNA binding
AT5G41010	AT5G41010	DNA-directed RNA polymerase activity	GO:0003899	transferase activity
AT5G41010	AT5G41010	transcription	GO:0006350	transcription
AT5G41010	AT5G41010	"DNA-directed RNA polymerase II, core complex"	GO:0005665	nucleus
AT5G41010	AT5G41010	"DNA-directed RNA polymerase II, core complex"	GO:0005665	other intracellular components
AT5G41010	AT5G41010	nucleus	GO:0005634	nucleus
AT5G41010	AT5G41010	DNA binding	GO:0003677	DNA or RNA binding
AT5G41010	AT5G41010	DNA-directed RNA polymerase activity	GO:0003899	transferase activity
AT5G41010	AT5G41010	transcription	GO:0006350	transcription
AT5G41010	AT5G41010	DNA-directed RNA polymerase IV complex	GO:0000418	nucleus
AT5G41010	AT5G41010	DNA-directed RNA polymerase IV complex	GO:0000418	other intracellular components

Gene Network Informations
Gene Network	Interact with..
FPEAECP006_C07_PDNR-F[interact with..]	Contig0512 FPEAECP006_C07_PDNR-F

Query Name	Length of query	GenBank	Accession number(Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
Contig0512	1260	ref	XP_002441353.1	hypothetical protein SORBIDRAFT_09g025080	Sorghum bicolor	267	397 bits (1021)	e-108	197/265 (74%)	222/265 (83%), Gaps = 7/265 (2%)	+2
FPEAECP006_C07_PDNR-F	639	ref	XP_002267800.1	PREDICTED: hypothetical protein	Vitis vinifera	51	108 bits (270)	4e-22	49/51 (96%)	49/51 (96%)	+2