Contig View

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Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
FEVCP	FEVCPS004_F10_PDNRF	682

Contig Map:

(ProjectName=FEVCP
SequenceName=NoContigFind):

Sequences View:[NoContigFind](Contig Seguence)

Sequences View:[FEVCPS004_F10_PDNRF](Singleton Sequence)

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
ref	XP_002518326.1	lipoic acid synthetase, putative	Ricinus communis	364	271 bits (693)	4e-71	136/165 (82%)	149/165 (90%)	+3

KEGG Pathway	GO
NoContigFind[1 Pathway]	NoContigFind[24 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Metabolism	Metabo lism of Cofactors and Vitamins	00785	Lipoic acid metabolism	[PATH:ath00785]	FEVCPS004_F10_PDNRF	AT5G08415	FEVCP

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT5G08415	AT5G08415	chloroplast	GO:0009507	chloroplast
AT5G08415	AT5G08415	catalytic activity	GO:0003824	other enzyme activity
AT5G08415	AT5G08415	lipoate synthase activity	GO:0016992	transferase activity
AT5G08415	AT5G08415	lipoate synthase activity	GO:0016992	other enzyme activity
AT5G08415	AT5G08415	lipoate biosynthetic process	GO:0009107	other cellular processes
AT5G08415	AT5G08415	lipoate biosynthetic process	GO:0009107	other metabolic processes
AT5G08415	AT5G08415	metabolic process	GO:0008152	other metabolic processes
AT5G08415	AT5G08415	iron-sulfur cluster binding	GO:0051536	other binding
AT5G08415	AT5G08415	"4 iron, 4 sulfur cluster binding"	GO:0051539	other binding
AT5G08415	AT5G08415	lipoic acid biosynthetic process	GO:0009105	other cellular processes
AT5G08415	AT5G08415	lipoic acid biosynthetic process	GO:0009105	other metabolic processes
AT5G08415	AT5G08415	lipoic acid synthase activity	GO:0017140	other enzyme activity
AT5G08415	AT5G08415	chloroplast	GO:0009507	chloroplast
AT5G08415	AT5G08415	catalytic activity	GO:0003824	other enzyme activity
AT5G08415	AT5G08415	lipoate synthase activity	GO:0016992	transferase activity
AT5G08415	AT5G08415	lipoate synthase activity	GO:0016992	other enzyme activity
AT5G08415	AT5G08415	lipoate biosynthetic process	GO:0009107	other cellular processes
AT5G08415	AT5G08415	lipoate biosynthetic process	GO:0009107	other metabolic processes
AT5G08415	AT5G08415	metabolic process	GO:0008152	other metabolic processes
AT5G08415	AT5G08415	iron-sulfur cluster binding	GO:0051536	other binding
AT5G08415	AT5G08415	"4 iron, 4 sulfur cluster binding"	GO:0051539	other binding
AT5G08415	AT5G08415	lipoic acid biosynthetic process	GO:0009105	other cellular processes
AT5G08415	AT5G08415	lipoic acid biosynthetic process	GO:0009105	other metabolic processes
AT5G08415	AT5G08415	lipoic acid synthase activity	GO:0017140	other enzyme activity

Gene Network Informations
Gene Network	Interact with..
FEVCPS004_F10_PDNRF[interact with..]	FEVCPM025_B04_PDNR-F FEVCPS021_D03_PDNR-F

Query Name	Length of query	GenBank	Accession number(Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
FEVCPM025_B04_PDNR-F	851	ref	XP_002321521.1	predicted protein	Populus trichocarpa	136	213 bits (543)	1e-53	101/134 (75%)	114/134 (85%)	+2
FEVCPS021_D03_PDNR-F	885	ref	XP_002464024.1	hypothetical protein SORBIDRAFT_01g010800	Sorghum bicolor	653	233 bits (594)	2e-59	107/137 (78%)	125/137 (91%)	+2