Contig View

Back [Phalaenopsis Transcriptome]

Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
FEVCP	FEVCPM025_B04_PDNR-F	851

Contig Map:

(ProjectName=FEVCP
SequenceName=NoContigFind):

Sequences View:[NoContigFind](Contig Seguence)

Sequences View:[FEVCPM025_B04_PDNR-F](Singleton Sequence)

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
ref	XP_002321521.1	predicted protein	Populus trichocarpa	136	213 bits (543)	1e-53	101/134 (75%)	114/134 (85%)	+2

KEGG Pathway	GO
NoContigFind[1 Pathway]	NoContigFind[10 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Genetic Information Processing	Folding, Sorting and Degradation	03060	Protein export	[PATH:ath03060]	FEVCPM025_B04_PDNR-F	AT1G48160	FEVCP

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT1G48160	AT1G48160	7S RNA binding	GO:0008312	DNA or RNA binding
AT1G48160	AT1G48160	SRP-dependent cotranslational protein targeting to membrane	GO:0006614	transport
AT1G48160	AT1G48160	SRP-dependent cotranslational protein targeting to membrane	GO:0006614	other cellular processes
AT1G48160	AT1G48160	signal recognition particle	GO:0048500	other cytoplasmic components
AT1G48160	AT1G48160	signal recognition particle	GO:0048500	other intracellular components
AT1G48160	AT1G48160	"signal recognition particle, endoplasmic reticulum targeting"	GO:0005786	other cytoplasmic components
AT1G48160	AT1G48160	"signal recognition particle, endoplasmic reticulum targeting"	GO:0005786	other intracellular components
AT1G48160	AT1G48160	7S RNA binding	GO:0008312	DNA or RNA binding
AT1G48160	AT1G48160	protein targeting	GO:0006605	transport
AT1G48160	AT1G48160	protein targeting	GO:0006605	other cellular processes

Gene Network Informations
Gene Network	Interact with..
FEVCPM025_B04_PDNR-F[interact with..]	Not found!