Contig View

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Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
FEVCP	FEVCPContig0557	940

Contig Map:

(ProjectName=FEVCP
SequenceName=NoContigFind):

Sequences View:[NoContigFind](Contig Seguence)

Sequences View:[FEVCPContig0557](Singleton Sequence)

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
ref	XP_002282719.1	PREDICTED: hypothetical protein	Vitis vinifera	152	319 bits (818)	2e-85	151/152 (99%)	152/152 (100%)	+2

KEGG Pathway	GO
NoContigFind[1 Pathway]	NoContigFind[15 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Genetic Information Processing	Folding, Sorting and Degradation	04120	Ubiquitin mediated proteolysis	[PATH:ath04120]	FEVCPContig0557	AT2G02760	FEVCP

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT2G02760	AT2G02760	ubiquitin-protein ligase activity	GO:0004842	other enzyme activity
AT2G02760	AT2G02760	ubiquitin-protein ligase activity	GO:0004842	other enzyme activity
AT2G02760	AT2G02760	ubiquitin-protein ligase activity	GO:0004842	other enzyme activity
AT2G02760	AT2G02760	UV protection	GO:0009650	response to abiotic or biotic stimulus
AT2G02760	AT2G02760	ubiquitin-dependent protein catabolic process	GO:0006511	protein metabolism
AT2G02760	AT2G02760	ubiquitin-dependent protein catabolic process	GO:0006511	other cellular processes
AT2G02760	AT2G02760	ubiquitin-dependent protein catabolic process	GO:0006511	other metabolic processes
AT2G02760	AT2G02760	ubiquitin-dependent protein catabolic process	GO:0006511	protein metabolism
AT2G02760	AT2G02760	ubiquitin-dependent protein catabolic process	GO:0006511	other cellular processes
AT2G02760	AT2G02760	ubiquitin-dependent protein catabolic process	GO:0006511	other metabolic processes
AT2G02760	AT2G02760	vegetative to reproductive phase transition of meristem	GO:0010228	developmental processes
AT2G02760	AT2G02760	histone H2B ubiquitination	GO:0033523	protein metabolism
AT2G02760	AT2G02760	histone H2B ubiquitination	GO:0033523	other cellular processes
AT2G02760	AT2G02760	histone H2B ubiquitination	GO:0033523	other metabolic processes
AT2G02760	AT2G02760	histone H2B ubiquitination	GO:0033523	cell organization and biogenesis

Gene Network Informations
Gene Network	Interact with..
FEVCPContig0557[interact with..]	FEVCPM027_G02_PDNR-F Contig0151 FEVCPContig0557 FEVCPM025_F08_PDNR-F FEVCPS012_D01_PDNRF FEVCPM026_B08_PDNR-F

Query Name	Length of query	GenBank	Accession number(Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
FEVCPM027_G02_PDNR-F	921	gb	ABH07428.1	vacuolar H+-ATPase subunit C	Gossypium hirsutum	377	408 bits (1049)	e-112	201/257 (78%)	224/257 (87%), Gaps = 2/257 (0%)	+1
Contig0151	809	gb	ACN50179.1	ubiquitin carrier-like protein	Annona cherimola	152	308 bits (790)	3e-82	145/152 (95%)	148/152 (97%)	+2
FEVCPContig0557	940	ref	XP_002282719.1	PREDICTED: hypothetical protein	Vitis vinifera	152	319 bits (818)	2e-85	151/152 (99%)	152/152 (100%)	+2
FEVCPM025_F08_PDNR-F	872	ref	NP_001055755.1	Os05g0460200	Oryza sativa (japonica cultivar-group)	169	267 bits (682)	1e-69	122/147 (82%)	130/147 (88%)	+2
FEVCPS012_D01_PDNRF	935	ref	NP_001055755.1	Os05g0460200	Oryza sativa (japonica cultivar-group)	169	276 bits (706)	2e-72	125/149 (83%)	135/149 (90%)	+1
FEVCPM026_B08_PDNR-F	920	gb	ACF06574.1	ubiquitin-conjugating enzyme	Elaeis guineensis	160	319 bits (818)	2e-85	144/160 (90%)	153/160 (95%)	+3