Contig View

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Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
FEICP	Contig4310	1357

Contig Map:

(ProjectName=FEICP SequenceName=Contig4310):
EICPM003-D9_pDNR-F:
EICPM003-D9_pDNR-R:

Sequences View:[Contig4310](Contig Seguence)

1357 bases 
GTTACACGAGGCATTGCGGGGATTCGGCCATTACGGCCGGGGATCTTCGAATTAACCAAAATCCCCTTATAGAGAATCCGGCTCCTCTCCTTCACCACTCTGTGCTCGAATCCTTCTGCAACGATGTACGGATTCGAAGCCATGACGTTCAATATCCATGGAGGATACCTCGAGGCCATCGTGCGCGGTTACAGATCTGGTCTCCTCACTGCCGCCGACTACAATAATCTCTGCCAGTGCGAAACCCTAGAAGACATCAAGATGCACCTCTCCGCTACTGAGTACGGTCCGTACCTTCAGAACGAACCTTCTCCCCTACATACAACCACAATTGTGGAGAAGTGCACTCTTAAATTGGTGGATGAGTATAAGCACATGTTGTGCCAAGCCACAGAACCATTGTCAACCTTCTTGGAGTACATAACATATGGCCACATGATTGATAATGTTGTGCTTATTGTCACTGGTACATTGCATGAGAGAGATGTGCATGAATTATTAGAGAAATGCCATCCTTTGGGCATGTTTGAGAGCATTGCCACCCTTGCGGTTGCCCAAAACATGCGAGAGCTCTATAGATTGGTTCTTGTTGACACACCATTGGCTCCATACTTTTCTGAGTGCATCACATCAGAGGATTTGGATGATATGAATATTGAAATCATGAGGAACACTCTTTACAAGGCATATCTAGAGGACTTTTATCAATTCTGCAAGAAACTTGGAGGTGCAACTTCTGAAATAATGTGTGATCTCCTGTCTTTTGAAGCAGACAGAAGAGCTGTAAATATCACAATAAATAGTATTGGCACTGAGCTGACTCGGGATGATCGGAGGAAGCTATATTCTAATTTTGGCTTATTATATCCGTATGGACATGAAGAACTTGCTGTTTGTGAGGATTTTGATCAGGTTCGTGGTGTGTTGGAGAAATACCCGCCGTATCAGTCGATATTCTCCAAACTATCTTATGGTGAAAGCCAGATGTTAGACAAGGCTTTTTACGAGGAGGAAGTGAAAAGGCTTTGCCTGGCATTTGAGCAGCAGTTCCACTACGCAGTATTCTTTGCATATTATAGACTGAGGGAGCGGGAGATGCGGAACTTGATGGGGATATCGGAATGTGGGGCGCAGAATCAGAAATCAAGAGTTCATGACAGTGGGGTTTTTATTTTGTGATTTTTACATTTCCCCCCCTCCGAACATCTTCCTCCCCCATCTGTGAAATGTTCAAAAAAAATGTCCCCTTTAATTCTGTATTTCTAATCCCCCGCACTTCCCCCCATTATGTATTTCACAGGGATGTTATATTTTGTTGGTTGTCCACAAAAAAAAAAAAAAAAAAAAAAAAAAAACA

Sequences View:[Contig4310](Singleton Sequence)

Contig4310 1357  bases 
GTTACACGAGGCATTGCGGGGATTCGGCCATTACGGCCGGGGATCTTCGAATTAACCAAAATCCCCTTATAGAGAATCCGGCTCCTCTCCTTCACCACTCTGTGCTCGAATCCTTCTGCAACGATGTACGGATTCGAAGCCATGACGTTCAATATCCATGGAGGATACCTCGAGGCCATCGTGCGCGGTTACAGATCTGGTCTCCTCACTGCCGCCGACTACAATAATCTCTGCCAGTGCGAAACCCTAGAAGACATCAAGATGCACCTCTCCGCTACTGAGTACGGTCCGTACCTTCAGAACGAACCTTCTCCCCTACATACAACCACAATTGTGGAGAAGTGCACTCTTAAATTGGTGGATGAGTATAAGCACATGTTGTGCCAAGCCACAGAACCATTGTCAACCTTCTTGGAGTACATAACATATGGCCACATGATTGATAATGTTGTGCTTATTGTCACTGGTACATTGCATGAGAGAGATGTGCATGAATTATTAGAGAAATGCCATCCTTTGGGCATGTTTGAGAGCATTGCCACCCTTGCGGTTGCCCAAAACATGCGAGAGCTCTATAGATTGGTTCTTGTTGACACACCATTGGCTCCATACTTTTCTGAGTGCATCACATCAGAGGATTTGGATGATATGAATATTGAAATCATGAGGAACACTCTTTACAAGGCATATCTAGAGGACTTTTATCAATTCTGCAAGAAACTTGGAGGTGCAACTTCTGAAATAATGTGTGATCTCCTGTCTTTTGAAGCAGACAGAAGAGCTGTAAATATCACAATAAATAGTATTGGCACTGAGCTGACTCGGGATGATCGGAGGAAGCTATATTCTAATTTTGGCTTATTATATCCGTATGGACATGAAGAACTTGCTGTTTGTGAGGATTTTGATCAGGTTCGTGGTGTGTTGGAGAAATACCCGCCGTATCAGTCGATATTCTCCAAACTATCTTATGGTGAAAGCCAGATGTTAGACAAGGCTTTTTACGAGGAGGAAGTGAAAAGGCTTTGCCTGGCATTTGAGCAGCAGTTCCACTACGCAGTATTCTTTGCATATTATAGACTGAGGGAGCGGGAGATGCGGAACTTGATGGGGATATCGGAATGTGGGGCGCAGAATCAGAAATCAAGAGTTCATGACAGTGGGGTTTTTATTTTGTGATTTTTACATTTCCCCCCCTCCGAACATCTTCCTCCCCCATCTGTGAAATGTTCAAAAAAAATGTCCCCTTTAATTCTGTATTTCTAATCCCCCGCACTTCCCCCCATTATGTATTTCACAGGGATGTTATATTTTGTTGGTTGTCCACAAAAAAAAAAAAAAAAAAAAAAAAAAAACA

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
gb	ABN08957.1	H+-transporting two-sector ATPase, C (AC39) subunit	Medicago truncatula	351	669 bits (1727)	0.0	327/350 (93%)	339/350 (96%)	+1

KEGG Pathway	GO
Contig4310[2 Pathway]	Contig4310[54 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Cellular Processes	Transport and Catabolism	04145	Phagosome	[PATH:ath04145]	Contig4310	AT3G28715	FEICP
Metabolism	Energy Metabolism	00190	Oxidative phosphorylation	[PATH:ath00190]	Contig4310	AT3G28715	FEICP

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT3G28715	AT3G28715	proton transport	GO:0015992	transport
AT3G28715	AT3G28715	"proton-transporting ATPase activity, rotational mechanism"	GO:0046961	hydrolase activity
AT3G28715	AT3G28715	"proton-transporting ATPase activity, rotational mechanism"	GO:0046961	transporter activity
AT3G28715	AT3G28715	plasma membrane	GO:0005886	plasma membrane
AT3G28715	AT3G28715	vacuole	GO:0005773	other cytoplasmic components
AT3G28715	AT3G28715	vacuole	GO:0005773	other cytoplasmic components
AT3G28715	AT3G28715	vacuole	GO:0005773	other intracellular components
AT3G28715	AT3G28715	vacuole	GO:0005773	other intracellular components
AT3G28715	AT3G28715	hydrogen ion transmembrane transporter activity	GO:0015078	transporter activity
AT3G28715	AT3G28715	ATP synthesis coupled proton transport	GO:0015986	transport
AT3G28715	AT3G28715	ATP synthesis coupled proton transport	GO:0015986	other cellular processes
AT3G28715	AT3G28715	ATP synthesis coupled proton transport	GO:0015986	other metabolic processes
AT3G28715	AT3G28715	ATP synthesis coupled proton transport	GO:0015986	electron transport or energy pathways
AT3G28715	AT3G28715	hydrogen ion transmembrane transporter activity	GO:0015078	transporter activity
AT3G28715	AT3G28715	ATP synthesis coupled proton transport	GO:0015986	transport
AT3G28715	AT3G28715	ATP synthesis coupled proton transport	GO:0015986	other cellular processes
AT3G28715	AT3G28715	ATP synthesis coupled proton transport	GO:0015986	other metabolic processes
AT3G28715	AT3G28715	ATP synthesis coupled proton transport	GO:0015986	electron transport or energy pathways
AT3G28715	AT3G28715	proton transport	GO:0015992	transport
AT3G28715	AT3G28715	"proton-transporting ATPase activity, rotational mechanism"	GO:0046961	hydrolase activity
AT3G28715	AT3G28715	"proton-transporting ATPase activity, rotational mechanism"	GO:0046961	transporter activity
AT3G28715	AT3G28715	plasma membrane	GO:0005886	plasma membrane
AT3G28715	AT3G28715	vacuole	GO:0005773	other cytoplasmic components
AT3G28715	AT3G28715	vacuole	GO:0005773	other cytoplasmic components
AT3G28715	AT3G28715	vacuole	GO:0005773	other intracellular components
AT3G28715	AT3G28715	vacuole	GO:0005773	other intracellular components
AT3G28715	AT3G28715	hydrogen ion transmembrane transporter activity	GO:0015078	transporter activity
AT3G28715	AT3G28715	ATP synthesis coupled proton transport	GO:0015986	transport
AT3G28715	AT3G28715	ATP synthesis coupled proton transport	GO:0015986	other cellular processes
AT3G28715	AT3G28715	ATP synthesis coupled proton transport	GO:0015986	other metabolic processes
AT3G28715	AT3G28715	ATP synthesis coupled proton transport	GO:0015986	electron transport or energy pathways
AT3G28715	AT3G28715	hydrogen ion transmembrane transporter activity	GO:0015078	transporter activity
AT3G28715	AT3G28715	ATP synthesis coupled proton transport	GO:0015986	transport
AT3G28715	AT3G28715	ATP synthesis coupled proton transport	GO:0015986	other cellular processes
AT3G28715	AT3G28715	ATP synthesis coupled proton transport	GO:0015986	other metabolic processes
AT3G28715	AT3G28715	ATP synthesis coupled proton transport	GO:0015986	electron transport or energy pathways
AT3G28715	AT3G28715	proton transport	GO:0015992	transport
AT3G28715	AT3G28715	"proton-transporting ATPase activity, rotational mechanism"	GO:0046961	hydrolase activity
AT3G28715	AT3G28715	"proton-transporting ATPase activity, rotational mechanism"	GO:0046961	transporter activity
AT3G28715	AT3G28715	plasma membrane	GO:0005886	plasma membrane
AT3G28715	AT3G28715	vacuole	GO:0005773	other cytoplasmic components
AT3G28715	AT3G28715	vacuole	GO:0005773	other cytoplasmic components
AT3G28715	AT3G28715	vacuole	GO:0005773	other intracellular components
AT3G28715	AT3G28715	vacuole	GO:0005773	other intracellular components
AT3G28715	AT3G28715	hydrogen ion transmembrane transporter activity	GO:0015078	transporter activity
AT3G28715	AT3G28715	ATP synthesis coupled proton transport	GO:0015986	transport
AT3G28715	AT3G28715	ATP synthesis coupled proton transport	GO:0015986	other cellular processes
AT3G28715	AT3G28715	ATP synthesis coupled proton transport	GO:0015986	other metabolic processes
AT3G28715	AT3G28715	ATP synthesis coupled proton transport	GO:0015986	electron transport or energy pathways
AT3G28715	AT3G28715	hydrogen ion transmembrane transporter activity	GO:0015078	transporter activity
AT3G28715	AT3G28715	ATP synthesis coupled proton transport	GO:0015986	transport
AT3G28715	AT3G28715	ATP synthesis coupled proton transport	GO:0015986	other cellular processes
AT3G28715	AT3G28715	ATP synthesis coupled proton transport	GO:0015986	other metabolic processes
AT3G28715	AT3G28715	ATP synthesis coupled proton transport	GO:0015986	electron transport or energy pathways

Gene Network Informations
Gene Network	Interact with..
Contig4310[interact with..]	EICPM046_A09_pDNR-F EICPS016_B11_pDNR-F Contig3724 EICPS040_G07_pDNR-F Contig4310

Query Name	Length of query	GenBank	Accession number(Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
EICPM046_A09_pDNR-F	983	ref	XP_002514179.1	Charged multivesicular body protein 4b, putative	Ricinus communis	218	227 bits (579)	1e-57	117/149 (78%)	125/149 (83%)	+2
EICPS016_B11_pDNR-F	811	ref	NP_001151790.1	calcineurin subunit B	Zea mays	175	291 bits (744)	7e-77	144/175 (82%)	162/175 (92%)	+3
Contig3724	1154	ref	XP_002321226.1	predicted protein	Populus trichocarpa	298	488 bits (1256)	e-136	242/290 (83%)	260/290 (89%)	+2
EICPS040_G07_pDNR-F	1054	ref	XP_002321226.1	predicted protein	Populus trichocarpa	298	379 bits (972)	e-103	189/233 (81%)	203/233 (87%)	+1
Contig4310	1357	gb	ABN08957.1	H+-transporting two-sector ATPase, C (AC39) subunit	Medicago truncatula	351	669 bits (1727)	0.0	327/350 (93%)	339/350 (96%)	+1