Contig View

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Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
FCTEVCP	FCTEVCPM086_G11_PDNR-F	886

Contig Map:

(ProjectName=FCTEVCP
SequenceName=NoContigFind):

Sequences View:[NoContigFind](Contig Seguence)

Sequences View:[FCTEVCPM086_G11_PDNR-F](Singleton Sequence)

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
ref	XP_002324443.1	predicted protein	Populus trichocarpa	611	340 bits (871)	1e-91	185/294 (62%)	205/294 (69%), Gaps = 2/294 (0%)	+1

KEGG Pathway	GO
NoContigFind[1 Pathway]	NoContigFind[13 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Genetic Information Processing	Transcription	03040	Spliceosome	[PATH:ath03040]	FCTEVCPM086_G11_PDNR-F	AT1G77180	FCTEVCP

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT1G77180	AT1G77180	nucleolus	GO:0005730	nucleus
AT1G77180	AT1G77180	nucleolus	GO:0005730	other intracellular components
AT1G77180	AT1G77180	nucleus	GO:0005634	nucleus
AT1G77180	AT1G77180	nucleus	GO:0005634	nucleus
AT1G77180	AT1G77180	transcription activator activity	GO:0016563	other molecular functions
AT1G77180	AT1G77180	RNA splicing	GO:0008380	other cellular processes
AT1G77180	AT1G77180	RNA splicing	GO:0008380	other metabolic processes
AT1G77180	AT1G77180	response to salt stress	GO:0009651	response to stress
AT1G77180	AT1G77180	response to salt stress	GO:0009651	response to abiotic or biotic stimulus
AT1G77180	AT1G77180	response to abscisic acid stimulus	GO:0009737	other biological processes
AT1G77180	AT1G77180	response to mannitol stimulus	GO:0010555	other biological processes
AT1G77180	AT1G77180	nucleolus	GO:0005730	nucleus
AT1G77180	AT1G77180	nucleolus	GO:0005730	other intracellular components

Gene Network Informations
Gene Network	Interact with..
FCTEVCPM086_G11_PDNR-F[interact with..]	FCTEVCPM022_G11_PDNR-F Contig1457 FCTEVCPM086_G11_PDNR-F

Query Name	Length of query	GenBank	Accession number(Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
FCTEVCPM022_G11_PDNR-F	575	dbj	BAF14435.2	Os04g0348300	Oryza sativa Japonica Group	769	275 bits (703)	2e-72	136/172 (79%)	152/172 (88%), Gaps = 2/172 (1%)	+3
Contig1457	876	ref	NP_001148948.1	LOC100282568	Zea mays	180	152 bits (384)	1e-68	74/89 (83%)	83/89 (93%)	+2
FCTEVCPM086_G11_PDNR-F	886	ref	XP_002324443.1	predicted protein	Populus trichocarpa	611	340 bits (871)	1e-91	185/294 (62%)	205/294 (69%), Gaps = 2/294 (0%)	+1