Contig View

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Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
FCTEVCP	Contig1059	1361

Contig Map:

(ProjectName=FCTEVCP SequenceName=Contig1059):
FCTEVCPM085_D08_PDNR-F:
FCTEVCPM075_G06_PDNR-F:

Sequences View:[Contig1059](Contig Seguence)

1361 bases 
GTCTCCTCACTCCTTCAAGCTCTCACAAGCAGCAGAGCAAATGGCTTCTGCTTCAGTAACCGCCGTTGTCTCTCTCCCCTCCTCTAAATCCTCCTCCATTCCTCCCTCCGCTCGAATTTCAATCTCACCGTGCGAAAGAATCCACTTTCACAGAGCAAGATTCCACCTTTCTTCTTCCCAGACTACCAGCAGATTGATATCTGTCAGAGCTCAAGTAACCACTGAAGCTCCTGCAACGATTGAGAAGGTCTCAAAGAAGGATGAGGAGGGAGTCATCACCAATAAGTTCAAGCCCAAGACGCCGTACATTGGCCGTTGTCTCCTCAACACCAGGATCACCGGCGACGATGCTCCTGGAGAAACCTGGCACATGGTCTTCAGCACCGAAGGGGAGATTCCCTATAGAGAAGGGCAGTCAGTTGGTGTCATCGCCGAAGGAGTTGATAAAAATGGGAAGCCTCATAAACTGAGGTTGTATTCTATTGCTAGCAGTGCTATTGGGGATTTTGGTGATTCCAAAACAGTTTCTCTTTGTGTAAAGAGGGTAGTTTACACCAATGATCAAGGGGAGATTGTTAAAGGAGTGTGCTCTAATTTCTTATGTGATTTGAAGCCTGGGGATCCTGTTAAGCTCACAGGGCCGGTTGGGAAAGAGATGCTGATGCCTAAGGATCCCAATGCTACTGTTATAATGCTTGGAACTGGAACTGGAATTGCTCCTTTCCGTGGATTCTTGTGGAAAATGTTCTTTGAGAAGCATGAGGATTACAAGTTCAATGGCCTAGCATGGCTCTTCTTGGGAGTTCCCACTAGCTCCTCCTTGCTCTACAAAGAGGAGTTTGAGAAAATGAAAGAGAAGGCTGCTGATAATTTCAGACTGGACTTCGCAGTGAGCAGAGAGCAGACTAATGCCAAGGGAGAGAAGATGTACATCCAAACACGCATGGCTGAATATGCAGAGGAACTGTGGAAGCTTCTCAAGAAAGATAACACCTTTGTTTATATGTGTGGATTGAAAGGCATGGAGAAGGGTATTGATGATATCATGTCCACTTTGGCTGCTAAGGAAGGTATTGAATGGATTGAGTACAAAAAGGAGCTTAAGAGGAACGAGCAGTGGAATGTTGAGGTGTATTAGTGCTTTCTTCTTTCATTTTCTAATGGAAGTTCGCTTGTGTAAATAGTTAACTTGTTCTGTGTATTGTGTTACATAATTGTTTGTGCAAGGCAGCTTATTATTGCTGTATTTCTCAGTTTTTTATAGCATAGAAGTGGAATATGTAACGTGCATGACAGTACTTGCACCTCAAACTAATTTCAGTATCCAATTTTTCCCGAAAAAAAAAAAAAAAAAAAAAAAA

Sequences View:[Contig1059](Singleton Sequence)

Contig1059 1361  bases 
GTCTCCTCACTCCTTCAAGCTCTCACAAGCAGCAGAGCAAATGGCTTCTGCTTCAGTAACCGCCGTTGTCTCTCTCCCCTCCTCTAAATCCTCCTCCATTCCTCCCTCCGCTCGAATTTCAATCTCACCGTGCGAAAGAATCCACTTTCACAGAGCAAGATTCCACCTTTCTTCTTCCCAGACTACCAGCAGATTGATATCTGTCAGAGCTCAAGTAACCACTGAAGCTCCTGCAACGATTGAGAAGGTCTCAAAGAAGGATGAGGAGGGAGTCATCACCAATAAGTTCAAGCCCAAGACGCCGTACATTGGCCGTTGTCTCCTCAACACCAGGATCACCGGCGACGATGCTCCTGGAGAAACCTGGCACATGGTCTTCAGCACCGAAGGGGAGATTCCCTATAGAGAAGGGCAGTCAGTTGGTGTCATCGCCGAAGGAGTTGATAAAAATGGGAAGCCTCATAAACTGAGGTTGTATTCTATTGCTAGCAGTGCTATTGGGGATTTTGGTGATTCCAAAACAGTTTCTCTTTGTGTAAAGAGGGTAGTTTACACCAATGATCAAGGGGAGATTGTTAAAGGAGTGTGCTCTAATTTCTTATGTGATTTGAAGCCTGGGGATCCTGTTAAGCTCACAGGGCCGGTTGGGAAAGAGATGCTGATGCCTAAGGATCCCAATGCTACTGTTATAATGCTTGGAACTGGAACTGGAATTGCTCCTTTCCGTGGATTCTTGTGGAAAATGTTCTTTGAGAAGCATGAGGATTACAAGTTCAATGGCCTAGCATGGCTCTTCTTGGGAGTTCCCACTAGCTCCTCCTTGCTCTACAAAGAGGAGTTTGAGAAAATGAAAGAGAAGGCTGCTGATAATTTCAGACTGGACTTCGCAGTGAGCAGAGAGCAGACTAATGCCAAGGGAGAGAAGATGTACATCCAAACACGCATGGCTGAATATGCAGAGGAACTGTGGAAGCTTCTCAAGAAAGATAACACCTTTGTTTATATGTGTGGATTGAAAGGCATGGAGAAGGGTATTGATGATATCATGTCCACTTTGGCTGCTAAGGAAGGTATTGAATGGATTGAGTACAAAAAGGAGCTTAAGAGGAACGAGCAGTGGAATGTTGAGGTGTATTAGTGCTTTCTTCTTTCATTTTCTAATGGAAGTTCGCTTGTGTAAATAGTTAACTTGTTCTGTGTATTGTGTTACATAATTGTTTGTGCAAGGCAGCTTATTATTGCTGTATTTCTCAGTTTTTTATAGCATAGAAGTGGAATATGTAACGTGCATGACAGTACTTGCACCTCAAACTAATTTCAGTATCCAATTTTTCCCGAAAAAAAAAAAAAAAAAAAAAAAA

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
ref	XP_002304324.1	predicted protein	Populus trichocarpa	363	572 bits (1475)	e-161	274/334 (82%)	296/334 (88%)	+2

KEGG Pathway	GO
Contig1059[1 Pathway]	Contig1059[128 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Metabolism	Energy Metabolism	00195	Photosynthesis	[PATH:ath00195]	Contig1059	AT5G66190	FCTEVCP

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT5G66190	AT5G66190	chloroplast	GO:0009507	chloroplast
AT5G66190	AT5G66190	chloroplast	GO:0009507	chloroplast
AT5G66190	AT5G66190	chloroplast stroma	GO:0009570	plastid
AT5G66190	AT5G66190	chloroplast stroma	GO:0009570	plastid
AT5G66190	AT5G66190	chloroplast stroma	GO:0009570	chloroplast
AT5G66190	AT5G66190	chloroplast stroma	GO:0009570	chloroplast
AT5G66190	AT5G66190	chloroplast stroma	GO:0009570	other cytoplasmic components
AT5G66190	AT5G66190	chloroplast stroma	GO:0009570	other cytoplasmic components
AT5G66190	AT5G66190	chloroplast stroma	GO:0009570	other intracellular components
AT5G66190	AT5G66190	chloroplast stroma	GO:0009570	other intracellular components
AT5G66190	AT5G66190	thylakoid	GO:0009579	other intracellular components
AT5G66190	AT5G66190	thylakoid	GO:0009579	other intracellular components
AT5G66190	AT5G66190	thylakoid	GO:0009579	other intracellular components
AT5G66190	AT5G66190	thylakoid	GO:0009579	other intracellular components
AT5G66190	AT5G66190	chloroplast thylakoid membrane	GO:0009535	plastid
AT5G66190	AT5G66190	chloroplast thylakoid membrane	GO:0009535	plastid
AT5G66190	AT5G66190	chloroplast thylakoid membrane	GO:0009535	chloroplast
AT5G66190	AT5G66190	chloroplast thylakoid membrane	GO:0009535	chloroplast
AT5G66190	AT5G66190	chloroplast thylakoid membrane	GO:0009535	other membranes
AT5G66190	AT5G66190	chloroplast thylakoid membrane	GO:0009535	other membranes
AT5G66190	AT5G66190	chloroplast thylakoid membrane	GO:0009535	other cytoplasmic components
AT5G66190	AT5G66190	chloroplast thylakoid membrane	GO:0009535	other cytoplasmic components
AT5G66190	AT5G66190	chloroplast thylakoid membrane	GO:0009535	other intracellular components
AT5G66190	AT5G66190	chloroplast thylakoid membrane	GO:0009535	other intracellular components
AT5G66190	AT5G66190	chloroplast envelope	GO:0009941	plastid
AT5G66190	AT5G66190	chloroplast envelope	GO:0009941	plastid
AT5G66190	AT5G66190	chloroplast envelope	GO:0009941	chloroplast
AT5G66190	AT5G66190	chloroplast envelope	GO:0009941	chloroplast
AT5G66190	AT5G66190	chloroplast envelope	GO:0009941	other cytoplasmic components
AT5G66190	AT5G66190	chloroplast envelope	GO:0009941	other cytoplasmic components
AT5G66190	AT5G66190	chloroplast envelope	GO:0009941	other intracellular components
AT5G66190	AT5G66190	chloroplast envelope	GO:0009941	other intracellular components
AT5G66190	AT5G66190	apoplast	GO:0048046	extracellular
AT5G66190	AT5G66190	defense response to bacterium	GO:0042742	response to stress
AT5G66190	AT5G66190	defense response to bacterium	GO:0042742	response to abiotic or biotic stimulus
AT5G66190	AT5G66190	thylakoid lumen	GO:0031977	other intracellular components
AT5G66190	AT5G66190	chloroplast stroma	GO:0009570	plastid
AT5G66190	AT5G66190	chloroplast stroma	GO:0009570	chloroplast
AT5G66190	AT5G66190	chloroplast stroma	GO:0009570	other cytoplasmic components
AT5G66190	AT5G66190	chloroplast stroma	GO:0009570	other intracellular components
AT5G66190	AT5G66190	chloroplast thylakoid membrane	GO:0009535	plastid
AT5G66190	AT5G66190	chloroplast thylakoid membrane	GO:0009535	chloroplast
AT5G66190	AT5G66190	chloroplast thylakoid membrane	GO:0009535	other membranes
AT5G66190	AT5G66190	chloroplast thylakoid membrane	GO:0009535	plastid
AT5G66190	AT5G66190	chloroplast thylakoid membrane	GO:0009535	chloroplast
AT5G66190	AT5G66190	chloroplast thylakoid membrane	GO:0009535	other cytoplasmic components
AT5G66190	AT5G66190	chloroplast thylakoid membrane	GO:0009535	other intracellular components
AT5G66190	AT5G66190	chloroplast thylakoid membrane	GO:0009535	other membranes
AT5G66190	AT5G66190	chloroplast thylakoid membrane	GO:0009535	other cytoplasmic components
AT5G66190	AT5G66190	chloroplast	GO:0009507	chloroplast
AT5G66190	AT5G66190	chloroplast	GO:0009507	chloroplast
AT5G66190	AT5G66190	chloroplast stroma	GO:0009570	plastid
AT5G66190	AT5G66190	chloroplast stroma	GO:0009570	plastid
AT5G66190	AT5G66190	chloroplast stroma	GO:0009570	chloroplast
AT5G66190	AT5G66190	chloroplast stroma	GO:0009570	chloroplast
AT5G66190	AT5G66190	chloroplast stroma	GO:0009570	other cytoplasmic components
AT5G66190	AT5G66190	chloroplast stroma	GO:0009570	other cytoplasmic components
AT5G66190	AT5G66190	chloroplast stroma	GO:0009570	other intracellular components
AT5G66190	AT5G66190	chloroplast stroma	GO:0009570	other intracellular components
AT5G66190	AT5G66190	thylakoid	GO:0009579	other intracellular components
AT5G66190	AT5G66190	thylakoid	GO:0009579	other intracellular components
AT5G66190	AT5G66190	thylakoid	GO:0009579	other intracellular components
AT5G66190	AT5G66190	thylakoid	GO:0009579	other intracellular components
AT5G66190	AT5G66190	chloroplast thylakoid membrane	GO:0009535	plastid
AT5G66190	AT5G66190	chloroplast thylakoid membrane	GO:0009535	plastid
AT5G66190	AT5G66190	chloroplast thylakoid membrane	GO:0009535	chloroplast
AT5G66190	AT5G66190	chloroplast thylakoid membrane	GO:0009535	chloroplast
AT5G66190	AT5G66190	chloroplast thylakoid membrane	GO:0009535	other membranes
AT5G66190	AT5G66190	chloroplast thylakoid membrane	GO:0009535	other membranes
AT5G66190	AT5G66190	chloroplast thylakoid membrane	GO:0009535	other cytoplasmic components
AT5G66190	AT5G66190	chloroplast thylakoid membrane	GO:0009535	other cytoplasmic components
AT5G66190	AT5G66190	chloroplast thylakoid membrane	GO:0009535	other intracellular components
AT5G66190	AT5G66190	chloroplast thylakoid membrane	GO:0009535	other intracellular components
AT5G66190	AT5G66190	chloroplast envelope	GO:0009941	plastid
AT5G66190	AT5G66190	chloroplast envelope	GO:0009941	plastid
AT5G66190	AT5G66190	chloroplast envelope	GO:0009941	chloroplast
AT5G66190	AT5G66190	chloroplast envelope	GO:0009941	chloroplast
AT5G66190	AT5G66190	chloroplast envelope	GO:0009941	other cytoplasmic components
AT5G66190	AT5G66190	chloroplast envelope	GO:0009941	other cytoplasmic components
AT5G66190	AT5G66190	chloroplast envelope	GO:0009941	other intracellular components
AT5G66190	AT5G66190	chloroplast envelope	GO:0009941	other intracellular components
AT5G66190	AT5G66190	apoplast	GO:0048046	extracellular
AT5G66190	AT5G66190	defense response to bacterium	GO:0042742	response to stress
AT5G66190	AT5G66190	defense response to bacterium	GO:0042742	response to abiotic or biotic stimulus
AT5G66190	AT5G66190	thylakoid lumen	GO:0031977	other intracellular components
AT5G66190	AT5G66190	chloroplast stroma	GO:0009570	plastid
AT5G66190	AT5G66190	chloroplast stroma	GO:0009570	chloroplast
AT5G66190	AT5G66190	chloroplast stroma	GO:0009570	other cytoplasmic components
AT5G66190	AT5G66190	chloroplast stroma	GO:0009570	other intracellular components
AT5G66190	AT5G66190	chloroplast thylakoid membrane	GO:0009535	plastid
AT5G66190	AT5G66190	chloroplast thylakoid membrane	GO:0009535	chloroplast
AT5G66190	AT5G66190	chloroplast thylakoid membrane	GO:0009535	other membranes
AT5G66190	AT5G66190	chloroplast thylakoid membrane	GO:0009535	plastid
AT5G66190	AT5G66190	chloroplast thylakoid membrane	GO:0009535	chloroplast
AT5G66190	AT5G66190	chloroplast thylakoid membrane	GO:0009535	other cytoplasmic components
AT5G66190	AT5G66190	chloroplast thylakoid membrane	GO:0009535	other intracellular components
AT5G66190	AT5G66190	chloroplast thylakoid membrane	GO:0009535	other membranes
AT5G66190	AT5G66190	chloroplast thylakoid membrane	GO:0009535	other cytoplasmic components
AT5G66190	AT5G66190	chloroplast thylakoid membrane	GO:0009535	other intracellular components
AT5G66190	AT5G66190	NADPH dehydrogenase activity	GO:0003959	other enzyme activity
AT5G66190	AT5G66190	oxidoreductase activity	GO:0016491	other enzyme activity
AT5G66190	AT5G66190	poly(U) RNA binding	GO:0008266	DNA or RNA binding
AT5G66190	AT5G66190	"electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity"	GO:0045156	other molecular functions
AT5G66190	AT5G66190	"electron transporter, transferring electrons within the noncyclic electron transport pathway of photosynthesis activity"	GO:0045157	other molecular functions
AT5G66190	AT5G66190	photosynthetic electron transport chain	GO:0009767	other cellular processes
AT5G66190	AT5G66190	photosynthetic electron transport chain	GO:0009767	other metabolic processes
AT5G66190	AT5G66190	photosynthetic electron transport chain	GO:0009767	electron transport or energy pathways
AT5G66190	AT5G66190	oxidation-reduction process	GO:0055114	other metabolic processes
AT5G66190	AT5G66190	chloroplast	GO:0009507	chloroplast
AT5G66190	AT5G66190	thylakoid	GO:0009579	other intracellular components
AT5G66190	AT5G66190	apoplast	GO:0048046	extracellular
AT5G66190	AT5G66190	defense response to bacterium	GO:0042742	response to stress
AT5G66190	AT5G66190	defense response to bacterium	GO:0042742	response to abiotic or biotic stimulus
AT5G66190	AT5G66190	chloroplast thylakoid membrane	GO:0009535	other intracellular components
AT5G66190	AT5G66190	NADPH dehydrogenase activity	GO:0003959	other enzyme activity
AT5G66190	AT5G66190	oxidoreductase activity	GO:0016491	other enzyme activity
AT5G66190	AT5G66190	poly(U) RNA binding	GO:0008266	DNA or RNA binding
AT5G66190	AT5G66190	"electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity"	GO:0045156	other molecular functions
AT5G66190	AT5G66190	"electron transporter, transferring electrons within the noncyclic electron transport pathway of photosynthesis activity"	GO:0045157	other molecular functions
AT5G66190	AT5G66190	photosynthetic electron transport chain	GO:0009767	other cellular processes
AT5G66190	AT5G66190	photosynthetic electron transport chain	GO:0009767	other metabolic processes
AT5G66190	AT5G66190	photosynthetic electron transport chain	GO:0009767	electron transport or energy pathways
AT5G66190	AT5G66190	oxidation-reduction process	GO:0055114	other metabolic processes
AT5G66190	AT5G66190	chloroplast	GO:0009507	chloroplast
AT5G66190	AT5G66190	thylakoid	GO:0009579	other intracellular components
AT5G66190	AT5G66190	apoplast	GO:0048046	extracellular
AT5G66190	AT5G66190	defense response to bacterium	GO:0042742	response to stress
AT5G66190	AT5G66190	defense response to bacterium	GO:0042742	response to abiotic or biotic stimulus

Gene Network Informations
Gene Network	Interact with..
Contig1059[interact with..]	Contig0023 FCTEVCPM022_H06_PDNR-F

Query Name	Length of query	GenBank	Accession number(Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
Contig0023	677	ref	NP_176291.1	FED A; 2 iron, 2 sulfur cluster binding / electron carrier/ iron-sulfur cluster binding	Arabidopsis thaliana	148	142 bits (357)	3e-32	72/130 (55%)	86/130 (66%)	+1
FCTEVCPM022_H06_PDNR-F	569	ref	NP_176291.1	FED A; 2 iron, 2 sulfur cluster binding / electron carrier/ iron-sulfur cluster binding	Arabidopsis thaliana	148	145 bits (367)	1e-33	74/132 (56%)	88/132 (66%)	+1