Contig View

Back [Phalaenopsis Transcriptome]

Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
FAECPM	FAECPM004_B03_PDNRF	867

Contig Map:

(ProjectName=FAECPM
SequenceName=NoContigFind):

Sequences View:[NoContigFind](Contig Seguence)

Sequences View:[FAECPM004_B03_PDNRF](Singleton Sequence)

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
ref	XP_002466978.1	hypothetical protein SORBIDRAFT_01g017790	Sorghum bicolor	613	299 bits (766)	1e-88	154/225 (68%)	172/225 (76%)	+3

KEGG Pathway	GO
NoContigFind[2 Pathway]	NoContigFind[42 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Metabolism	Carbohydrate Metabolism	00620	Pyruvate metabolism	[PATH:ath00620]	FAECPM004_B03_PDNRF	AT4G00570	FAECPM
Metabolism	Energy Metabolism	00710	Carbon fixation in photosynthetic organisms	[PATH:ath00710]	FAECPM004_B03_PDNRF	AT4G00570	FAECPM

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT4G00570	AT4G00570	chloroplast	GO:0009507	chloroplast
AT4G00570	AT4G00570	mitochondrion	GO:0005739	mitochondria
AT4G00570	AT4G00570	ATP binding	GO:0005524	nucleotide binding
AT4G00570	AT4G00570	mitochondrion	GO:0005739	mitochondria
AT4G00570	AT4G00570	malate dehydrogenase (decarboxylating) activity	GO:0004471	other enzyme activity
AT4G00570	AT4G00570	malic enzyme activity	GO:0004470	other enzyme activity
AT4G00570	AT4G00570	"oxidoreductase activity, acting on NADH or NADPH, NAD or NADP as acceptor"	GO:0016652	other enzyme activity
AT4G00570	AT4G00570	zinc ion binding	GO:0008270	other binding
AT4G00570	AT4G00570	malate metabolic process	GO:0006108	other cellular processes
AT4G00570	AT4G00570	malate metabolic process	GO:0006108	other metabolic processes
AT4G00570	AT4G00570	malate metabolic process	GO:0006108	other cellular processes
AT4G00570	AT4G00570	malate metabolic process	GO:0006108	other metabolic processes
AT4G00570	AT4G00570	protein homodimerization activity	GO:0042803	protein binding
AT4G00570	AT4G00570	cobalt ion binding	GO:0050897	other binding
AT4G00570	AT4G00570	chloroplast	GO:0009507	chloroplast
AT4G00570	AT4G00570	mitochondrion	GO:0005739	mitochondria
AT4G00570	AT4G00570	ATP binding	GO:0005524	nucleotide binding
AT4G00570	AT4G00570	mitochondrion	GO:0005739	mitochondria
AT4G00570	AT4G00570	malate dehydrogenase (decarboxylating) activity	GO:0004471	other enzyme activity
AT4G00570	AT4G00570	malic enzyme activity	GO:0004470	other enzyme activity
AT4G00570	AT4G00570	"oxidoreductase activity, acting on NADH or NADPH, NAD or NADP as acceptor"	GO:0016652	other enzyme activity
AT4G00570	AT4G00570	zinc ion binding	GO:0008270	other binding
AT4G00570	AT4G00570	malate metabolic process	GO:0006108	other cellular processes
AT4G00570	AT4G00570	malate metabolic process	GO:0006108	other metabolic processes
AT4G00570	AT4G00570	malate metabolic process	GO:0006108	other cellular processes
AT4G00570	AT4G00570	malate metabolic process	GO:0006108	other metabolic processes
AT4G00570	AT4G00570	protein homodimerization activity	GO:0042803	protein binding
AT4G00570	AT4G00570	cobalt ion binding	GO:0050897	other binding
AT4G00570	AT4G00570	chloroplast	GO:0009507	chloroplast
AT4G00570	AT4G00570	mitochondrion	GO:0005739	mitochondria
AT4G00570	AT4G00570	ATP binding	GO:0005524	nucleotide binding
AT4G00570	AT4G00570	mitochondrion	GO:0005739	mitochondria
AT4G00570	AT4G00570	malate dehydrogenase (decarboxylating) activity	GO:0004471	other enzyme activity
AT4G00570	AT4G00570	malic enzyme activity	GO:0004470	other enzyme activity
AT4G00570	AT4G00570	"oxidoreductase activity, acting on NADH or NADPH, NAD or NADP as acceptor"	GO:0016652	other enzyme activity
AT4G00570	AT4G00570	zinc ion binding	GO:0008270	other binding
AT4G00570	AT4G00570	malate metabolic process	GO:0006108	other cellular processes
AT4G00570	AT4G00570	malate metabolic process	GO:0006108	other metabolic processes
AT4G00570	AT4G00570	malate metabolic process	GO:0006108	other cellular processes
AT4G00570	AT4G00570	malate metabolic process	GO:0006108	other metabolic processes
AT4G00570	AT4G00570	protein homodimerization activity	GO:0042803	protein binding
AT4G00570	AT4G00570	cobalt ion binding	GO:0050897	other binding

Gene Network Informations
Gene Network	Interact with..
FAECPM004_B03_PDNRF[interact with..]	FAECPM004_B03_PDNRF

Query Name	Length of query	GenBank	Accession number(Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
FAECPM004_B03_PDNRF	867	ref	XP_002466978.1	hypothetical protein SORBIDRAFT_01g017790	Sorghum bicolor	613	299 bits (766)	1e-88	154/225 (68%)	172/225 (76%)	+3