Contig View

Back [Phalaenopsis Transcriptome]

Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
454	FXQQ4OB02JMSZK	259

Contig Map:

(ProjectName=454
SequenceName=NoContigFind):

Sequences View:[NoContigFind](Contig Seguence)

Sequences View:[FXQQ4OB02JMSZK](Singleton Sequence)

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
ref	NP_001049265.1	Os03g0196600	Oryza sativa (japonica cultivar-group)	525	128 bits (321)	2e-28	58/75 (77%)	65/75 (86%)	-1

KEGG Pathway	GO
NoContigFind[2 Pathway]	NoContigFind[33 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Metabolism	Amino Acid Metabolism	00270	Cysteine and methionine metabolism	[PATH:ath00270]	FXQQ4OB02JMSZK	AT1G55920	454
Metabolism	Energy Metabolism	00920	Sulfur metabolism	[PATH:ath00920]	FXQQ4OB02JMSZK	AT1G55920	454

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT1G55920	AT1G55920	nucleus	GO:0005634	nucleus
AT1G55920	AT1G55920	chloroplast	GO:0009507	chloroplast
AT1G55920	AT1G55920	cytosol	GO:0005829	cytosol
AT1G55920	AT1G55920	serine O-acetyltransferase activity	GO:0009001	transferase activity
AT1G55920	AT1G55920	serine O-acetyltransferase activity	GO:0009001	transferase activity
AT1G55920	AT1G55920	response to cold	GO:0009409	response to stress
AT1G55920	AT1G55920	response to cold	GO:0009409	response to stress
AT1G55920	AT1G55920	response to cold	GO:0009409	response to abiotic or biotic stimulus
AT1G55920	AT1G55920	response to cold	GO:0009409	response to abiotic or biotic stimulus
AT1G55920	AT1G55920	cellular response to sulfate starvation	GO:0009970	response to stress
AT1G55920	AT1G55920	cellular response to sulfate starvation	GO:0009970	other cellular processes
AT1G55920	AT1G55920	nucleus	GO:0005634	nucleus
AT1G55920	AT1G55920	chloroplast	GO:0009507	chloroplast
AT1G55920	AT1G55920	cytosol	GO:0005829	cytosol
AT1G55920	AT1G55920	serine O-acetyltransferase activity	GO:0009001	transferase activity
AT1G55920	AT1G55920	serine O-acetyltransferase activity	GO:0009001	transferase activity
AT1G55920	AT1G55920	response to cold	GO:0009409	response to stress
AT1G55920	AT1G55920	response to cold	GO:0009409	response to stress
AT1G55920	AT1G55920	response to cold	GO:0009409	response to abiotic or biotic stimulus
AT1G55920	AT1G55920	response to cold	GO:0009409	response to abiotic or biotic stimulus
AT1G55920	AT1G55920	cellular response to sulfate starvation	GO:0009970	response to stress
AT1G55920	AT1G55920	cellular response to sulfate starvation	GO:0009970	other cellular processes
AT1G55920	AT1G55920	nucleus	GO:0005634	nucleus
AT1G55920	AT1G55920	chloroplast	GO:0009507	chloroplast
AT1G55920	AT1G55920	cytosol	GO:0005829	cytosol
AT1G55920	AT1G55920	serine O-acetyltransferase activity	GO:0009001	transferase activity
AT1G55920	AT1G55920	serine O-acetyltransferase activity	GO:0009001	transferase activity
AT1G55920	AT1G55920	response to cold	GO:0009409	response to stress
AT1G55920	AT1G55920	response to cold	GO:0009409	response to stress
AT1G55920	AT1G55920	response to cold	GO:0009409	response to abiotic or biotic stimulus
AT1G55920	AT1G55920	response to cold	GO:0009409	response to abiotic or biotic stimulus
AT1G55920	AT1G55920	cellular response to sulfate starvation	GO:0009970	response to stress
AT1G55920	AT1G55920	cellular response to sulfate starvation	GO:0009970	other cellular processes

Gene Network Informations
Gene Network	Interact with..
FXQQ4OB02JMSZK[interact with..]	FXQQ4OB02JMSZK contig07330

Query Name	Length of query	GenBank	Accession number(Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
FXQQ4OB02JMSZK	259	ref	NP_001049265.1	Os03g0196600	Oryza sativa (japonica cultivar-group)	525	128 bits (321)	2e-28	58/75 (77%)	65/75 (86%)	-1
contig07330	242	gb	ABF70113.1	serine O-acetyltransferase, putative	Musa balbisiana	305	149 bits (376)	1e-34	71/80 (88%)	75/80 (93%)	+2