Contig View

Back [Phalaenopsis Transcriptome]

Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
454	FXQQ4OB01CAA0C	254

Contig Map:

(ProjectName=454
SequenceName=NoContigFind):

Sequences View:[NoContigFind](Contig Seguence)

Sequences View:[FXQQ4OB01CAA0C](Singleton Sequence)

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
gb	ACL54597.1	unknown	Zea mays	729	110 bits (274)	7e-23	53/58 (91%)	57/58 (98%)	+3

KEGG Pathway	GO
NoContigFind[1 Pathway]	NoContigFind[17 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Genetic Information Processing	Replication and Repair	03030	DNA replication	[PATH:ath03030]	FXQQ4OB01CAA0C	AT2G07690	454

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT2G07690	AT2G07690	ATP binding	GO:0005524	nucleotide binding
AT2G07690	AT2G07690	DNA binding	GO:0003677	DNA or RNA binding
AT2G07690	AT2G07690	cytoplasm	GO:0005737	other cytoplasmic components
AT2G07690	AT2G07690	nucleus	GO:0005634	nucleus
AT2G07690	AT2G07690	ATP binding	GO:0005524	nucleotide binding
AT2G07690	AT2G07690	DNA binding	GO:0003677	DNA or RNA binding
AT2G07690	AT2G07690	DNA-dependent ATPase activity	GO:0008094	hydrolase activity
AT2G07690	AT2G07690	DNA-dependent DNA replication initiation	GO:0006270	DNA or RNA metabolism
AT2G07690	AT2G07690	DNA unwinding involved in replication	GO:0006268	DNA or RNA metabolism
AT2G07690	AT2G07690	cell proliferation	GO:0008283	other cellular processes
AT2G07690	AT2G07690	cell proliferation	GO:0008283	other cellular processes
AT2G07690	AT2G07690	nuclear chromatin	GO:0000790	nucleus
AT2G07690	AT2G07690	nuclear chromatin	GO:0000790	other intracellular components
AT2G07690	AT2G07690	nuclear chromatin	GO:0000790	nucleus
AT2G07690	AT2G07690	nuclear chromatin	GO:0000790	other intracellular components
AT2G07690	AT2G07690	ATP binding	GO:0005524	nucleotide binding
AT2G07690	AT2G07690	DNA binding	GO:0003677	DNA or RNA binding

Gene Network Informations
Gene Network	Interact with..
FXQQ4OB01CAA0C[interact with..]	FXQQ4OB01AG4B8 FXQQ4OB01CAA0C FXQQ4OB01CUAGI

Query Name	Length of query	GenBank	Accession number(Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
FXQQ4OB01AG4B8	241	ref	XP_002264009.1	PREDICTED: hypothetical protein	Vitis vinifera	882	73.6 bits (179)	7e-12	38/59 (64%)	48/59 (81%), Gaps = 2/59 (3%)	+1
FXQQ4OB01CAA0C	254	gb	ACL54597.1	unknown	Zea mays	729	110 bits (274)	7e-23	53/58 (91%)	57/58 (98%)	+3
FXQQ4OB01CUAGI	246	dbj	BAG93444.1	unnamed protein product	Oryza sativa Japonica Group	637	94.4 bits (233)	4e-18	48/48 (100%)	48/48 (100%)	-1