Back [Phalaenopsis Transcriptome]
Library Name:       Contig Lists:     
Contig Information:
Project NameQuery NameLength of query
454FXQQ4OB01C1OMZ250

Contig Map:
(ProjectName=454
SequenceName=NoContigFind):

Sequences View:[NoContigFind](Contig Seguence)


Sequences View:[FXQQ4OB01C1OMZ](Singleton Sequence)

Contig Annotation:
GenBankAccession number
(Best hits in the GenBank)
AnnotationSpeciesLength of homologous protein(Amino Acid)ScoreExpect valueIdentitiessimilarityFrame
refXP_002530606.1 nuclear protein skip, putative Ricinus communis238149 bits (375)1e-3475/84 (89%)79/84 (94%), Gaps = 1/84 (1%) +2

KEGG PathwayGO
NoContigFind[1 Pathway]NoContigFind[13 GoTerm]
Pathway Informations
First-level termsSecond-level termsKEGG pathway NumKEGG pathway NameKEGG pathway Description contig NamelocusNameproject Name
Genetic Information ProcessingTranscription03040Spliceosome[PATH:ath03040]FXQQ4OB01C1OMZAT1G77180454

GO Informations
Locus NameGo NameGo Class DescriptionsGO idAnotations01
AT1G77180AT1G77180nucleolusGO:0005730nucleus
AT1G77180AT1G77180nucleolusGO:0005730other intracellular components
AT1G77180AT1G77180nucleusGO:0005634nucleus
AT1G77180AT1G77180nucleusGO:0005634nucleus
AT1G77180AT1G77180transcription activator activityGO:0016563other molecular functions
AT1G77180AT1G77180RNA splicingGO:0008380other cellular processes
AT1G77180AT1G77180RNA splicingGO:0008380other metabolic processes
AT1G77180AT1G77180response to salt stressGO:0009651response to stress
AT1G77180AT1G77180response to salt stressGO:0009651response to abiotic or biotic stimulus
AT1G77180AT1G77180response to abscisic acid stimulusGO:0009737other biological processes
AT1G77180AT1G77180response to mannitol stimulusGO:0010555other biological processes
AT1G77180AT1G77180nucleolusGO:0005730nucleus
AT1G77180AT1G77180nucleolusGO:0005730other intracellular components

Gene Network Informations
Gene NetworkInteract with..
FXQQ4OB01C1OMZ[interact with..]FXQQ4OB01AHJ51
FXQQ4OB01BPOIG
FXQQ4OB01C5ELI
FXQQ4OB01CLAR5
FXQQ4OB01EKGRS
FXQQ4OB02HNDG5
contig04115
contig05636
contig03875
contig07730
FXQQ4OB01C14GP
FXQQ4OB02F1MNO
FXQQ4OB02HK4VG
FXQQ4OB02IF8WD
FXQQ4OB01C1OMZ
FXQQ4OB02IHZ1Y
FXQQ4OB02IZI70
Query NameLength of queryGenBankAccession number(Best hits in the GenBank)AnnotationSpeciesLength of homologous protein(Amino Acid)ScoreExpect valueIdentitiessimilarityFrame
FXQQ4OB01AHJ51241dbjBAF14435.2 Os04g0348300 Oryza sativa Japonica Group76982.4 bits (202)1e-1442/71 (59%)51/71 (71%) -2
FXQQ4OB01BPOIG239refXP_002521973.1 cell division control protein, putative Ricinus communis104985.9 bits (211)5e-2040/57 (70%)50/57 (87%) -1
FXQQ4OB01C5ELI240gbABU49591.1 CDC5-like protein Solanum lycopersicum987130 bits (326)6e-2963/79 (79%)71/79 (89%) +3
FXQQ4OB01CLAR5240dbjBAF14435.2 Os04g0348300 Oryza sativa Japonica Group76995.1 bits (235)2e-1847/80 (58%)60/80 (75%) -1
FXQQ4OB01EKGRS240dbjBAF14435.2 Os04g0348300 Oryza sativa Japonica Group76995.1 bits (235)2e-1847/80 (58%)60/80 (75%) -1
FXQQ4OB02HNDG5239embCAD40345.2 OSJNBa0020I02.14 Oryza sativa (japonica cultivar-group)98572.4 bits (176)4e-1437/66 (56%)45/66 (68%) -3
contig04115275gbACG37327.1 24-methylenesterol C-methyltransferase 2 Zea mays370154 bits (388)4e-3669/90 (76%)81/90 (90%) +3
contig05636364gbAAC34989.1 24-methylene lophenol C24(1)methyltransferase Oryza sativa36373.9 bits (180)5e-1233/39 (84%)36/39 (92%) +2
contig03875528gbACF06538.1 adenine phosphoribosyltransferase 1 Elaeis guineensis181134 bits (336)5e-3065/80 (81%)73/80 (91%) +2
contig07730300gbACF06538.1 adenine phosphoribosyltransferase 1 Elaeis guineensis181149 bits (377)7e-3572/82 (87%)78/82 (95%) +2
FXQQ4OB01C14GP233refXP_002527412.1 dead box ATP-dependent RNA helicase, putative Ricinus communis505118 bits (296)2e-2555/58 (94%)58/58 (100%) -1
FXQQ4OB02F1MNO263gbABN08415.1 Helicase, C-terminal Medicago truncatula49975.5 bits (184)1e-2838/44 (86%)41/44 (93%), Gaps = 1/44 (2%) -3
FXQQ4OB02HK4VG234refXP_002527412.1 dead box ATP-dependent RNA helicase, putative Ricinus communis505150 bits (379)4e-3571/77 (92%)76/77 (98%) +3
FXQQ4OB02IF8WD268refXP_002527412.1 dead box ATP-dependent RNA helicase, putative Ricinus communis50566.2 bits (160)1e-0936/65 (55%)40/65 (61%), Gaps = 5/65 (7%) +2
FXQQ4OB01C1OMZ250refXP_002530606.1 nuclear protein skip, putative Ricinus communis238149 bits (375)1e-3475/84 (89%)79/84 (94%), Gaps = 1/84 (1%) +2
FXQQ4OB02IHZ1Y217refXP_002530606.1 nuclear protein skip, putative Ricinus communis23892.8 bits (229)6e-2041/52 (78%)48/52 (92%) +3
FXQQ4OB02IZI70217gbABR25556.1 pre-mRNA-splicing factor prp45 Oryza sativa (indica cultivar-group)10382.4 bits (202)1e-1438/48 (79%)44/48 (91%) +1