Contig View

Back [Phalaenopsis Transcriptome]

Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
454	FXQQ4OB01A80B1	225

Contig Map:

(ProjectName=454
SequenceName=NoContigFind):

Sequences View:[NoContigFind](Contig Seguence)

Sequences View:[FXQQ4OB01A80B1](Singleton Sequence)

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
dbj	BAA95830.1	putative cystathionine beta-lyase	Oryza sativa Japonica Group	383	144 bits (362)	4e-33	69/75 (92%)	74/75 (98%)	+1

KEGG Pathway	GO
NoContigFind[4 Pathway]	NoContigFind[42 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Metabolism	Amino Acid Metabolism	00270	Cysteine and methionine metabolism	[PATH:ath00270]	FXQQ4OB01A80B1	AT3G57050	454
Metabolism	Energy Metabolism	00910	Nitrogen metabolism	[PATH:ath00910]	FXQQ4OB01A80B1	AT3G57050	454
Metabolism	Energy Metabolism	00920	Sulfur metabolism	[PATH:ath00920]	FXQQ4OB01A80B1	AT3G57050	454
Metabolism	Metabolism of Other Amino Acids	00450	Selenocompound metabolism	[PATH:ath00450]	FXQQ4OB01A80B1	AT3G57050	454

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT3G57050	AT3G57050	chloroplast	GO:0009507	chloroplast
AT3G57050	AT3G57050	chloroplast	GO:0009507	chloroplast
AT3G57050	AT3G57050	cystathionine beta-lyase activity	GO:0004121	other enzyme activity
AT3G57050	AT3G57050	L-methionine biosynthetic process from L-homoserine via cystathionine	GO:0019279	other cellular processes
AT3G57050	AT3G57050	L-methionine biosynthetic process from L-homoserine via cystathionine	GO:0019279	other metabolic processes
AT3G57050	AT3G57050	chloroplast	GO:0009507	chloroplast
AT3G57050	AT3G57050	chloroplast	GO:0009507	chloroplast
AT3G57050	AT3G57050	chloroplast	GO:0009507	chloroplast
AT3G57050	AT3G57050	chloroplast	GO:0009507	chloroplast
AT3G57050	AT3G57050	cystathionine beta-lyase activity	GO:0004121	other enzyme activity
AT3G57050	AT3G57050	L-methionine biosynthetic process from L-homoserine via cystathionine	GO:0019279	other cellular processes
AT3G57050	AT3G57050	L-methionine biosynthetic process from L-homoserine via cystathionine	GO:0019279	other metabolic processes
AT3G57050	AT3G57050	chloroplast	GO:0009507	chloroplast
AT3G57050	AT3G57050	chloroplast	GO:0009507	chloroplast
AT3G57050	AT3G57050	chloroplast	GO:0009507	chloroplast
AT3G57050	AT3G57050	chloroplast	GO:0009507	chloroplast
AT3G57050	AT3G57050	cystathionine beta-lyase activity	GO:0004121	other enzyme activity
AT3G57050	AT3G57050	L-methionine biosynthetic process from L-homoserine via cystathionine	GO:0019279	other cellular processes
AT3G57050	AT3G57050	L-methionine biosynthetic process from L-homoserine via cystathionine	GO:0019279	other metabolic processes
AT3G57050	AT3G57050	chloroplast	GO:0009507	chloroplast
AT3G57050	AT3G57050	chloroplast	GO:0009507	chloroplast
AT3G57050	AT3G57050	chloroplast	GO:0009507	chloroplast
AT3G57050	AT3G57050	chloroplast	GO:0009507	chloroplast
AT3G57050	AT3G57050	cystathionine beta-lyase activity	GO:0004121	other enzyme activity
AT3G57050	AT3G57050	L-methionine biosynthetic process from L-homoserine via cystathionine	GO:0019279	other cellular processes
AT3G57050	AT3G57050	L-methionine biosynthetic process from L-homoserine via cystathionine	GO:0019279	other metabolic processes
AT3G57050	AT3G57050	chloroplast	GO:0009507	chloroplast
AT3G57050	AT3G57050	chloroplast	GO:0009507	chloroplast
AT3G57050	AT3G57050	chloroplast	GO:0009507	chloroplast
AT3G57050	AT3G57050	chloroplast	GO:0009507	chloroplast
AT3G57050	AT3G57050	cystathionine beta-lyase activity	GO:0004121	other enzyme activity
AT3G57050	AT3G57050	L-methionine biosynthetic process from L-homoserine via cystathionine	GO:0019279	other cellular processes
AT3G57050	AT3G57050	L-methionine biosynthetic process from L-homoserine via cystathionine	GO:0019279	other metabolic processes
AT3G57050	AT3G57050	chloroplast	GO:0009507	chloroplast
AT3G57050	AT3G57050	chloroplast	GO:0009507	chloroplast
AT3G57050	AT3G57050	chloroplast	GO:0009507	chloroplast
AT3G57050	AT3G57050	chloroplast	GO:0009507	chloroplast
AT3G57050	AT3G57050	cystathionine beta-lyase activity	GO:0004121	other enzyme activity
AT3G57050	AT3G57050	L-methionine biosynthetic process from L-homoserine via cystathionine	GO:0019279	other cellular processes
AT3G57050	AT3G57050	L-methionine biosynthetic process from L-homoserine via cystathionine	GO:0019279	other metabolic processes
AT3G57050	AT3G57050	chloroplast	GO:0009507	chloroplast
AT3G57050	AT3G57050	chloroplast	GO:0009507	chloroplast

Gene Network Informations
Gene Network	Interact with..
FXQQ4OB01A80B1[interact with..]	contig00884 FXQQ4OB01AP0R8 contig05280 FXQQ4OB01DDFBN FXQQ4OB01EY8E1 FXQQ4OB02FXEJ2 FXQQ4OB02GLA3U FXQQ4OB02JZEJ9 FXQQ4OB01CHA06 FXQQ4OB01A80B1 FXQQ4OB01CFD7P FXQQ4OB01DXIGN FXQQ4OB02HXJSF FXQQ4OB02IPT4G FXQQ4OB02ISB1P FXQQ4OB01A77YH FXQQ4OB01DZ4ZM

Query Name	Length of query	GenBank	Accession number(Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
contig00884	907	gb	ACF06492.1	ribosomal L9-like protein	Elaeis guineensis	189	310 bits (794)	1e-82	154/189 (81%)	168/189 (88%)	+3
FXQQ4OB01AP0R8	277	ref	NP_001055626.1	Os05g0430800	Oryza sativa (japonica cultivar-group)	541	91.3 bits (225)	5e-18	45/61 (73%)	53/61 (86%)	-3
contig05280	256	emb	CAA71762.1	Ubiquitin activating enzyme E1	Nicotiana tabacum	1080	112 bits (280)	1e-26	53/62 (85%)	58/62 (93%)	-1
FXQQ4OB01DDFBN	222	ref	XP_002526617.1	ubiquitin-activating enzyme E1, putative	Ricinus communis	1107	141 bits (356)	2e-32	64/74 (86%)	71/74 (95%)	+1
FXQQ4OB01EY8E1	254	ref	XP_002300000.1	predicted protein	Populus trichocarpa	1018	119 bits (299)	1e-33	53/62 (85%)	57/62 (91%)	+1
FXQQ4OB02FXEJ2	221	emb	CAO21409.1	unnamed protein product	Vitis vinifera	1089	69.3 bits (168)	5e-20	31/35 (88%)	34/35 (97%)	+3
FXQQ4OB02GLA3U	248	ref	XP_002526617.1	ubiquitin-activating enzyme E1, putative	Ricinus communis	1107	127 bits (320)	3e-28	59/81 (72%)	68/81 (83%)	+2
FXQQ4OB02JZEJ9	246	emb	CAO63845.1	unnamed protein product	Vitis vinifera	991	144 bits (364)	2e-33	68/80 (85%)	73/80 (91%)	+3
FXQQ4OB01CHA06	183	emb	CAO21764.1	unnamed protein product	Vitis vinifera	373	81.3 bits (199)	3e-14	38/49 (77%)	41/49 (83%)	+1
FXQQ4OB01A80B1	225	dbj	BAA95830.1	putative cystathionine beta-lyase	Oryza sativa Japonica Group	383	144 bits (362)	4e-33	69/75 (92%)	74/75 (98%)	+1
FXQQ4OB01CFD7P	223	emb	CAO63063.1	unnamed protein product	Vitis vinifera	403	96.3 bits (238)	5e-22	47/57 (82%)	51/57 (89%)	-2
FXQQ4OB01DXIGN	250	ref	XP_002512818.1	cystathionine beta-lyase, putative	Ricinus communis	467	85.5 bits (210)	2e-15	45/83 (54%)	57/83 (68%)	+2
FXQQ4OB02HXJSF	256	ref	XP_002512818.1	cystathionine beta-lyase, putative	Ricinus communis	467	98.6 bits (244)	1e-23	46/51 (90%)	48/51 (94%)	-1
FXQQ4OB02IPT4G	235	gb	AAF74980.1	AF082890_1 cystathionine beta-lyase	Solanum tuberosum	471	101 bits (251)	3e-20	50/65 (76%)	57/65 (87%)	+3
FXQQ4OB02ISB1P	229	ref	NP_001056951.1	Os06g0175800	Oryza sativa (japonica cultivar-group)	475	102 bits (254)	1e-27	51/55 (92%)	54/55 (98%)	+2
FXQQ4OB01A77YH	225	gb	AAL18925.1	AF429384_1 mevalonate kinase	Hevea brasiliensis	386	68.2 bits (165)	3e-10	33/71 (46%)	49/71 (69%)	-3
FXQQ4OB01DZ4ZM	262	ref	XP_002333619.1	predicted protein	Populus trichocarpa	268	75.1 bits (183)	2e-12	38/87 (43%)	59/87 (67%), Gaps = 1/87 (1%)	-3