Home   [Orchid Unigene Database]
Library Name:       Contig Lists:  
Contig Information:
Library NameQuery NameLength of query
OrchidUnigeneSingletons9016830





Sequences View:[Singletons9016](Singleton Sequence)


Contig Annotation:
GenBankAccession number
(Best hits in the GenBank)
AnnotationSpeciesLength of homologous protein(Amino Acid)ScoreExpect valueIdentitiessimilarityFrame
refXP_002305144.1 predicted protein Populus trichocarpa449427 bits (1097)e-118212/277 (76%)240/277 (86%), Gaps = 3/277 (1%) -1


KEGG PathwayGO
NoContigFind[2 Pathway]NoContigFind[42 GoTerm]

Pathway Informations
First-level termsSecond-level termsKEGG pathway NumKEGG pathway NameKEGG pathway Description contig NamelocusNameproject Name
Genetic Information ProcessingReplication and Repair03420Nucleotide excision repair[PATH:ath03420]Singletons9016AT4G17020OrchidUnigene
Genetic Information ProcessingTranscription03022Basal transcription factors[PATH:ath03022]Singletons9016AT4G17020OrchidUnigene

GO Informations
Locus NameGo NameGo Class DescriptionsGO idAnotations01
AT4G17020AT4G17020nucleusGO:0005634nucleus
AT4G17020AT4G17020RNA polymerase II transcription factor activityGO:0003702other molecular functions
AT4G17020AT4G17020DNA repairGO:0006281DNA or RNA metabolism
AT4G17020AT4G17020"regulation of transcription, DNA-dependent"GO:0006355transcription
AT4G17020AT4G17020"regulation of transcription, DNA-dependent"GO:0006355other cellular processes
AT4G17020AT4G17020"regulation of transcription, DNA-dependent"GO:0006355other metabolic processes
AT4G17020AT4G17020endomembrane systemGO:0012505other cellular components
AT4G17020AT4G17020nucleusGO:0005634nucleus
AT4G17020AT4G17020RNA polymerase II transcription factor activityGO:0003702other molecular functions
AT4G17020AT4G17020DNA repairGO:0006281DNA or RNA metabolism
AT4G17020AT4G17020"regulation of transcription, DNA-dependent"GO:0006355transcription
AT4G17020AT4G17020"regulation of transcription, DNA-dependent"GO:0006355other cellular processes
AT4G17020AT4G17020"regulation of transcription, DNA-dependent"GO:0006355other metabolic processes
AT4G17020AT4G17020endomembrane systemGO:0012505other cellular components
AT4G17020AT4G17020nucleusGO:0005634nucleus
AT4G17020AT4G17020RNA polymerase II transcription factor activityGO:0003702other molecular functions
AT4G17020AT4G17020DNA repairGO:0006281DNA or RNA metabolism
AT4G17020AT4G17020"regulation of transcription, DNA-dependent"GO:0006355transcription
AT4G17020AT4G17020"regulation of transcription, DNA-dependent"GO:0006355other cellular processes
AT4G17020AT4G17020"regulation of transcription, DNA-dependent"GO:0006355other metabolic processes
AT4G17020AT4G17020endomembrane systemGO:0012505other cellular components
AT4G17020AT4G17020nucleusGO:0005634nucleus
AT4G17020AT4G17020RNA polymerase II transcription factor activityGO:0003702other molecular functions
AT4G17020AT4G17020DNA repairGO:0006281DNA or RNA metabolism
AT4G17020AT4G17020"regulation of transcription, DNA-dependent"GO:0006355transcription
AT4G17020AT4G17020"regulation of transcription, DNA-dependent"GO:0006355other cellular processes
AT4G17020AT4G17020"regulation of transcription, DNA-dependent"GO:0006355other metabolic processes
AT4G17020AT4G17020endomembrane systemGO:0012505other cellular components
AT4G17020AT4G17020nucleusGO:0005634nucleus
AT4G17020AT4G17020RNA polymerase II transcription factor activityGO:0003702other molecular functions
AT4G17020AT4G17020DNA repairGO:0006281DNA or RNA metabolism
AT4G17020AT4G17020"regulation of transcription, DNA-dependent"GO:0006355transcription
AT4G17020AT4G17020"regulation of transcription, DNA-dependent"GO:0006355other cellular processes
AT4G17020AT4G17020"regulation of transcription, DNA-dependent"GO:0006355other metabolic processes
AT4G17020AT4G17020endomembrane systemGO:0012505other cellular components
AT4G17020AT4G17020nucleusGO:0005634nucleus
AT4G17020AT4G17020RNA polymerase II transcription factor activityGO:0003702other molecular functions
AT4G17020AT4G17020DNA repairGO:0006281DNA or RNA metabolism
AT4G17020AT4G17020"regulation of transcription, DNA-dependent"GO:0006355transcription
AT4G17020AT4G17020"regulation of transcription, DNA-dependent"GO:0006355other cellular processes
AT4G17020AT4G17020"regulation of transcription, DNA-dependent"GO:0006355other metabolic processes
AT4G17020AT4G17020endomembrane systemGO:0012505other cellular components

Gene Network Informations
Gene NetworkInteract with..
Singletons9016[interact with..]ConsensusfromContig6532
ConsensusfromContig8415
FXQQ4OB01A1TB0
Singletons14444
Singletons14636
ConsensusfromContig98
FPEAECP020_G02_PDNR-F
Singletons839
FXQQ4OB01DFTH1
FXQQ4OB02GS5SZ
Singletons47972
ConsensusfromContig2807
Singletons10088
Singletons5164
contig05928
Singletons1464
Singletons28350
ConsensusfromContig2123
FPTEVCPMContig[0621]
FXQQ4OB02HHV6W
Singletons42671
Singletons45868

Query NameLength of queryGenBankAccession number(Best hits in the GenBank)AnnotationSpeciesLength of homologous protein(Amino Acid)ScoreExpect valueIdentitiessimilarityFrame
ConsensusfromContig6532_Average_coverage__1.71671gbAAS20975.1 mago nashi-like protein Hyacinthus orientalis176305 bits (780)3e-81147/153 (96%)150/153 (98%) +3
ConsensusfromContig8415_Average_coverage__6.29744gbAAS20975.1 mago nashi-like protein Hyacinthus orientalis176303 bits (776)1e-80146/152 (96%)149/152 (98%) +2
FXQQ4OB01A1TB0refXP_002520757.1 DNA repair helicase rad3/xp-d, putative Ricinus communis758123 bits (309)6e-2759/62 (95%)60/62 (96%) -1
Singletons144441760refXP_002520757.1 DNA repair helicase rad3/xp-d, putative Ricinus communis7581044 bits (2700)0.0507/571 (88%)548/571 (95%) -1
Singletons14636542refXP_002520757.1 DNA repair helicase rad3/xp-d, putative Ricinus communis758174 bits (440)5e-5092/156 (58%)111/156 (71%), Gaps = 4/156 (2%) -1
ConsensusfromContig98_Average_coverage__2.201131embCBI16283.1 unnamed protein product Vitis vinifera494451 bits (1161)e-125211/282 (74%)239/282 (84%) -1
ConsensusfromContig980_Average_coverage__4.90950spQ1W375.1PMM_TOBAC RecName: Full=Phosphomannomutase; AltName: Full=NtPMM252427 bits (1098)e-118208/252 (82%)228/252 (90%) -1
ConsensusfromContig981_Average_coverage__1.71802dbjBAD44833.1 putative protein kinase Oryza sativa Japonica Group554310 bits (793)1e-82153/207 (73%)172/207 (83%) +1
ConsensusfromContig982_Average_coverage__2.06711embCBI34350.1 unnamed protein product Vitis vinifera477362 bits (928)2e-98177/231 (76%)205/231 (88%), Gaps = 1/231 (0%) +3
ConsensusfromContig983_Average_coverage__2.73710refXP_002327300.1 predicted protein Populus trichocarpa929150 bits (380)9e-3580/159 (50%)110/159 (69%), Gaps = 3/159 (1%) -1
ConsensusfromContig984_Average_coverage__3.301145refXP_002304347.1 predicted protein Populus trichocarpa861521 bits (1343)e-146247/312 (79%)282/312 (90%) -1
ConsensusfromContig985_Average_coverage__2.02938refXP_002529073.1 serine/threonine protein kinase, putative Ricinus communis847460 bits (1183)e-127227/312 (72%)256/312 (82%) +1
ConsensusfromContig986_Average_coverage__1.771020refXP_002298370.1 predicted protein Populus trichocarpa364317 bits (812)e-126155/204 (75%)173/204 (84%), Gaps = 3/204 (1%) -1
ConsensusfromContig987_Average_coverage__1.33710embCBI24454.1 unnamed protein product Vitis vinifera531283 bits (725)9e-75137/181 (75%)158/181 (87%) +3
ConsensusfromContig988_Average_coverage__2.98876embCBI15944.1 unnamed protein product Vitis vinifera752323 bits (827)2e-86160/257 (62%)185/257 (71%), Gaps = 10/257 (3%) +2
ConsensusfromContig989_Average_coverage__2.30709refXP_002514031.1 AP-4 complex subunit mu-1, putative Ricinus communis421398 bits (1023)e-109196/236 (83%)211/236 (89%) -1
FPEAECP020_G02_PDNR-F1035embCAE04735.1 OSJNBa0043L24.23 Oryza sativa (japonica cultivar-group)432397 bits (1020)e-108202/263 (76%)223/263 (84%), Gaps = 1/263 (0%) +1
Singletons839402refNP_001054876.1 Os05g0198700 Oryza sativa (japonica cultivar-group)165124 bits (312)3e-2758/69 (84%)65/69 (94%) +2
Singletons8391245[No hits found]
Singletons8392347[No hits found]
Singletons8393271[No hits found]
Singletons8394562refXP_002330664.1 predicted protein Populus trichocarpa428113 bits (283)1e-3348/78 (61%)58/78 (74%) +2
Singletons83951219refXP_002307894.1 predicted protein Populus trichocarpa339315 bits (807)e-123151/212 (71%)184/212 (86%) +1
Singletons83961535refXP_002531675.1 poly-A binding protein, putative Ricinus communis218175 bits (444)4e-4682/97 (84%)89/97 (91%) -2
Singletons83971111embCBI33148.1 unnamed protein product Vitis vinifera280190 bits (482)3e-46110/242 (45%)141/242 (58%), Gaps = 22/242 (9%) +1
Singletons8398434embCBI38763.1 unnamed protein product Vitis vinifera71991.3 bits (225)8e-2547/97 (48%)62/97 (63%) +2
Singletons8399229[No hits found]
FXQQ4OB01DFTH1refXP_002532948.1 RNA polymerase II transcription factor B subunit, putative Ricinus communis26680.5 bits (197)6e-1438/79 (48%)53/79 (67%) +2
FXQQ4OB02GS5SZrefNP_001045748.1 Os02g0125800 Oryza sativa (japonica cultivar-group)28995.9 bits (237)1e-1846/62 (74%)50/62 (80%) -3
Singletons47972721refNP_001045748.1 Os02g0125800 Oryza sativa (japonica cultivar-group)289284 bits (726)7e-75136/196 (69%)153/196 (78%) -1
ConsensusfromContig2807_Average_coverage__3.03416embCBI16563.1 unnamed protein product Vitis vinifera238196 bits (498)7e-49100/116 (86%)103/116 (88%) +1
Singletons10088220refXP_002319167.1 global transcription factor group Populus trichocarpa202127 bits (320)3e-2861/66 (92%)64/66 (96%) +1
Singletons5164397refNP_001105318.1 TATA-binding protein1 Zea mays200121 bits (304)7e-4062/68 (91%)66/68 (97%), Gaps = 1/68 (1%) -3
contig05928251gbACF22789.1 transcription factor related protein Brachypodium distachyon576136 bits (343)7e-3166/83 (79%)72/83 (86%) +3
Singletons14641374refXP_002307021.1 predicted protein Populus trichocarpa586196 bits (498)e-103111/201 (55%)129/201 (64%), Gaps = 2/201 (0%) +3
Singletons14640248refXP_002327271.1 proton-dependent oligopeptide transporter Populus trichocarpa55750.4 bits (119)8e-1022/27 (81%)25/27 (92%) +1
Singletons146431382embCBI32147.1 unnamed protein product Vitis vinifera504683 bits (1763)0.0311/337 (92%)327/337 (97%) +3
Singletons14644587embCBI38792.1 unnamed protein product Vitis vinifera491286 bits (731)1e-75152/195 (77%)164/195 (84%) -2
Singletons14645493[No hits found]
Singletons14646802embCBI26982.1 unnamed protein product Vitis vinifera373321 bits (823)5e-86160/242 (66%)183/242 (75%) -2
Singletons14647623embCBI22438.1 unnamed protein product Vitis vinifera300219 bits (558)1e-55111/157 (70%)122/157 (77%) +2
Singletons14648278dbjBAA77239.1 endo-1,4-beta glucanase Populus alba494121 bits (303)7e-3453/68 (77%)61/68 (89%) +2
Singletons14649407[No hits found]
Singletons28350118gbAAD10238.1 TATA-box binding protein Phaseolus vulgaris20079.0 bits (193)2e-1339/39 (100%)39/39 (100%) +2
ConsensusfromContig2123_Average_coverage__2.25500refXP_002308775.1 predicted protein Populus trichocarpa541123 bits (308)8e-2774/147 (50%)84/147 (57%), Gaps = 6/147 (4%) +1
FXQQ4OB02HHV6WrefXP_002322538.1 predicted protein Populus trichocarpa54072.8 bits (177)1e-1141/80 (51%)48/80 (60%), Gaps = 3/80 (3%) -3
Singletons42671291embCBI33123.1 unnamed protein product Vitis vinifera53981.6 bits (200)3e-1442/79 (53%)48/79 (60%), Gaps = 2/79 (2%) -2
Singletons45868431embCBI33123.1 unnamed protein product Vitis vinifera539210 bits (535)4e-53100/138 (72%)113/138 (81%) -3