Home [Orchid Unigene Database]
Library Name: Contig Lists:
Contig Information:

Library Name	Query Name	Length of query
OrchidUnigene	Singletons22306	4224

Sequences View:[Singletons22306](Singleton Sequence)

Singletons22306 4224 bases 
CCCCGTTTTTCATTTAACGAAGCTACTGGCTTGCTTTGCCACTCAAACCCTAAATTGTCCAGCGTAGGTGATCGCCTCCCGCTGCAATCACCATGCCTTTATTCCTTTCGGAGGAAGAGTTTTGTCTCATATCTAACGACGCCTCAGCTGTGGCGGAAAGGGCGGACGTCTTCATTTGCGATCTCCGTCAGCAGCTCGACGTCGTCCGGGCAGAGGCTGATGCGAAATCGATTGCCGAAGAGCAAAACTGCGCTCTCCTCGAGCAGAAATATGCTTCGCTGTACTCAGAGTTCTCGAGGCTGCAGTACGAGAACGCTCAGCTGTCTGCATCCACCGAAAAGAGTCTATCAGAGCTCGCGGATGTGCAGGCTGAGAAACATCAGCTTCATATTAAGGCGATTGGTAAGGATGCTGAATTAGAGAAACTCTCTTTGGAGGCAGCAGAGCTCCGTATATCAAAGCGGCAGCTTCTGGATTTGGTAGAGCAGAAGGATGCGGAGATTAGAGAGAGAAATAGTACCATTCAAAGCTACGTTGATAAGATTATACATATGTCAGAGAATAATTCTTCAAGGGAATCTAAACTAAATGAGATTGCGGCAGAACTGACACGTTGTCAAGCTACTTGTGCTAGGTTAACTCAGGAGAAAGAGCTACTGGAGAAACAGAATGTGTGGCTCGATGAAGAGCTCACCGGAAAAGCTAATACACTTTTTGAGTTGCGTAGAACGCAAATGGATGCTGAAGCAGAGAATTCTGAAAAAATTGCTGAACTAGAGAGGCAGGTCAAGGAATATTCCACATCACTGAACCATAGTAAGGAAATAAAAAAGGTGCTTGAGCTAAGAGTCAAATCATTGGAAGAGGACTTGCGTTCATCTAAGGATATTGCTGCTACTATTGAAGAGAATTTTAATGCTGAACTCACAACCGTTAATAAGCTTGTCGAGTTATACAAAGCAAGTTCGGAGGAATGGTCCAAAAAGGCTGGTGAGCTCGAGGGTGTCATCAAAGCTCTTGAGGCACATTTAAGTCAAGTTGAAGGTGACTATAAAGAGACATTGGAGAGGGAAGCATCTCTGAGGAAAGATCTTGAGAAGGAGGTTACTGATTTGAAAATGAAGTTAGAGAAGTGTGAAACTGAACTTGAAAACACCAGGAAAGCTAATGAATCGAGCCTTCTTCCATTGTCAATGTTACCGGTTGGCTCACATGTGGAAGAGCTTGAGGCTGGAAGTGATGCCAGTCAGATGCTCGTCCCTAGGATAGCTGCAGGTGTTTCAGGAACTGCATTGGCTGCTTCATTGCTTCGTGATGGATGGAGTCTCACCAAAATGTATGAGAAATATCAAGAAGCTTATGATGCTTTGCGACATGAGAAATGGGGTCGAAAACATGCTGAAGCAATATTGGAGCGGGTTCTACATGAGATACAGGGGAAGGCTGAAATGATTTTGGAAGAGCGAGCCGAGCATGAGAGAATGGTAGAGGCATATACTACAATGAATGAAAAATTGCAGCTGGCGCTTGTGGAGCATGATAGTCATGAAAACACTGTAAGGAATTTGAAGGCTGAATTGAGACGGCATGGGCGAGAATGTTCGATTGCACAAAAAGAAATAAATGATCTGCAAAAACAAGTAACTGTTCTACTTAAGGAATGCCAAGATATTCAACTTCGCTGTGGAGGTAATCCCCAGATGCCTGTGGAAGGTACTTTGACTTCTGTTTCTACAGCTAGCGGGAGCTTAGTTAATGCTGACAGAGTTATTTCTGACCACCTTCTGACTTACAAGGGCATAAATGAACTAGTGGAACAAAATGTTAAACTTCGAGGCCTTGTGCATAGACTTTCTGCTGATGAGGAGAAAAAGGAGACGGAAATGAGGTACAATTTTCAAAATGAACTTCGAAGAGTAGCTGATGACGCATCATCTAAGGTTGAGGTTGTCCTAAAAAGATCTGAGGAACAAGCAAGTTTGATAGAATCTCTTCATAGTGCAGTTGCAATGTACAAAAGATTATATGAGGAGGAACATAAATTCCGGACTTCTAGCCATTCATCTGCCACAGCTGTTTCAGATGATGGAAAGAAAGAGCTCATGCTTTTATTTGAAGGTTCACAGGAAGTCTCTAAGAAAGCCTATGAACAACTCTCTAGTCGTAGCAGAATTCTGGAAGAAGATATTGCAAGATTGAGTACAGAGCTTATTTCAGCACGAGCAGAGCGTGATAAAATGTCCCTAGAAGCTAATTTTTCCAAGGAGAGGCTAGATAGTTTCATGAAGGAATTTGAACATCAGAGATCGGAAATCAATGCTGTTTCTGTTAGAAATATGGAACTGACACACTTGCTCATTGATTATCAAAAGCAACTTCGTGAAAGTTCAGCTTTTTTACAAGCCTCGGAAGAGAATTTGCGGAAGCTATCCTTGGAGGTTTCAATTTTAAAGCATGAAAGAGAAATATTGGTCAGTTCCGAGAAAAGAGCTTCTGAAGAGGTTCAGACTTTGATGGAAAGAGTGCATCGTCTTCAGTCAAGTCTGGATACTATTCAAAGTGCTGAAGAAGTTCGTGAGGTTGCTAGAATTACGGAGAGGAGAAAACACCATGACTATCTTGAAAGAGTTGAAAGGGATTGGGCAGAGGCTAAGCGGGAACTTCAGGAGGAAAGGGACCGTGTTCGTGTTTTAACATCCGAGAAGGAAAGAGCACTTGAGACTTATATGAGCCAAGTGGAAGATATAAGAAAAGAACTAGCAAATGCTTGGCATTCTGTTGCAACTGCTGAATCTAGAGCAGCAGTGGCTGAGGCTCGATGTTCTGAACTTGAGGCGAAAATAAAAATCGCAGGAAAAGGGGTCGTCACTGAGATTGGCATTCATGAACAGTCAGTGCTTTCTACGAATGAGATATCTGATGAGTTGAGAAAAGCAAAGGAGGAGCTGGAGAAAGTTAAAGATGAAGCTCGTGCTAGTAAAGAATACATGATGCAGTACAAAGAAATGGCACGGGTAAATGAAATTGCGTTAAAGCAATTGGAATTGGCACATGAATGCTACAAGTCAGAGACGGTCAAAATGAAGAAGCTGCTTGAGGATGAAGCCCAATCTCTGAAAAATCAGGTTTCTGAGCTTGAAAAAAATTATATTTTGAAATGTGAAGAAGCTGCTTCTGCTACTGAAGCCAAAGAAAACGCTCTTTCTTCTGCACTTGTTGAAAACTCCAGATTGCGGGATGAAGTTGCTGAAAAATTAACAAGGCTCAATGAGTTGGAAATTCAAGTTTCTTCGTTAAAAGTTGATTTGGATAAAGAACGCAAGCGGTGGCGTATTGCCCAAGACAACTATGAAAGACAGGTAATCCTTCAGTCTGAGGCCATTCAGGAATTAACAAATACTTCGAGGGAGCTTTCTCTAATTCAAACAGAAATTTCAAGGTTACGCGAGCAATTGGATGCTCAAAGGGCTGAAAATGATCTTTTGAAGTTATCATGGGAAACGGAAAAGTCCAAACTAGAACAGATGAAGAGTGAAGCAGAGAGGAATAGCAATGAAATGAACGAACAGAATAGAATTTTGCACAACCGATTGGAAGCATTGCATGTTAGGTTGGCCGAGAAGGAACATAATTCTGTTGGGCTTTCATCGGTTAGTTCGCAAGAAGATGGTGATCTGCAGAAGGTCATAAGTTATCTGCGAAGGTCAAAAGAAATAGCAGAAACTGAGATAACCTTACTGAAGCAAGAAAAAATAAGGCTACAATCCAAAATTGATGGTGCATTGAAGGCCTCTGAATCCGCGCAAGCTTTGCTTTATTCTCAGCTTGAGAATGCAAGAGAACTTGTGTTGAAGAATGAGGAATTTAAGTCTCTTCAGCTTCAGGTGCGGGAAATTAATCTGCTCCGGGAAAGTAATATACAGCTGCGAGAGGAAAACAAGCACAACTTCGAAGAATGTCAGAAATTCCGTGAAAAGGCTCAGGAAGCTAAAGCAGAAGTTGATAACTTAGAAAAACTTTTAAAGCTGAAGCAAATTGAAGTTGATGATTTTCAAAAAGGTGCCGAGTTGCTGAAGATTGAGATCAGCAATCTGAACAATAGAAATGTTGAGGTACTTGAAGGTTACAAGAATATCGACATTAGTGAATATGAACATATGAAAGATGAGCATGAACAGATTAAGAATGCTTTTGCTAAGAAGCAGGAATCAATAATGAAGCTGG

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
emb	CBI24130.1	unnamed protein product	Vitis vinifera	2088	1441 bits (3730)	0.0	771/1384 (55%)	1019/1384 (73%), Gaps = 7/1384 (0%)	+3

KEGG Pathway	GO
NoContigFind[1 Pathway]	NoContigFind[15 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Genetic Information Processing	Translation	03013	RNA transport	[PATH:ath03013]	Singletons22306	AT1G79280	OrchidUnigene

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT1G79280	AT1G79280	chloroplast	GO:0009507	chloroplast
AT1G79280	AT1G79280	nucleolus	GO:0005730	nucleus
AT1G79280	AT1G79280	nucleolus	GO:0005730	other intracellular components
AT1G79280	AT1G79280	cytosol	GO:0005829	cytosol
AT1G79280	AT1G79280	nuclear envelope	GO:0005635	nucleus
AT1G79280	AT1G79280	nuclear envelope	GO:0005635	other intracellular components
AT1G79280	AT1G79280	molecular_function	GO:0003674	unknown molecular functions
AT1G79280	AT1G79280	poly(A)+ mRNA export from nucleus	GO:0016973	transport
AT1G79280	AT1G79280	poly(A)+ mRNA export from nucleus	GO:0016973	DNA or RNA metabolism
AT1G79280	AT1G79280	poly(A)+ mRNA export from nucleus	GO:0016973	other cellular processes
AT1G79280	AT1G79280	negative regulation of flower development	GO:0009910	developmental processes
AT1G79280	AT1G79280	stamen development	GO:0048443	developmental processes
AT1G79280	AT1G79280	negative regulation of protein sumoylation	GO:0033234	protein metabolism
AT1G79280	AT1G79280	negative regulation of protein sumoylation	GO:0033234	other cellular processes
AT1G79280	AT1G79280	negative regulation of protein sumoylation	GO:0033234	other metabolic processes

Gene Network Informations
Gene Network	Interact with..
Singletons22306[interact with..]	FCTEVCPM029_G02_PDNR-F FPEAECP035_E02_PDNR-F Singletons15277 Singletons33491 Singletons47715 EICPM015_B10_pDNR-F EICPM015-B10_pDNR-R Singletons11020 Singletons12321 Singletons43293 Singletons7434 FXQQ4OB01ENKBB Singletons22306 Singletons43150

Query Name	Length of query	GenBank	Accession number(Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
FCTEVCPM029_G02_PDNR-F	962	ref	XP_002520726.1	potassium channel regulatory factor, putative	Ricinus communis	417	285 bits (730)	4e-75	159/265 (60%)	186/265 (70%), Gaps = 9/265 (3%)	+2
FPEAECP035_E02_PDNR-F	963	ref	NP_001148433.1	LOC100282048	Zea mays	439	236 bits (603)	2e-60	113/136 (83%)	124/136 (91%)	+2
Singletons15277	542	ref	XP_002520726.1	potassium channel regulatory factor, putative	Ricinus communis	417	101 bits (251)	4e-20	63/161 (39%)	80/161 (49%)	+3
Singletons33491	152	ref	XP_002520726.1	potassium channel regulatory factor, putative	Ricinus communis	417	78.6 bits (192)	2e-13	40/51 (78%)	43/51 (84%), Gaps = 1/51 (1%)	-3
Singletons47715	661	ref	XP_002307588.1	predicted protein	Populus trichocarpa	420	308 bits (788)	4e-82	152/178 (85%)	160/178 (89%), Gaps = 2/178 (1%)	-1
EICPM015_B10_pDNR-F	1048	emb	CBI34639.1	unnamed protein product	Vitis vinifera	1047	66.6 bits (161)	2e-12	30/83 (36%)	49/83 (59%)	+3
EICPM015-B10_pDNR-R	888	gb	AAT08673.1	nucleoporin	Hyacinthus orientalis	161	103 bits (258)	7e-24	55/100 (55%)	66/100 (66%)	+3
Singletons11020	898	emb	CBI34639.1	unnamed protein product	Vitis vinifera	1047	250 bits (639)	1e-64	137/247 (55%)	159/247 (64%), Gaps = 6/247 (2%)	+1
Singletons12321	937	dbj	BAF98996.1	nucleoporin 98	Daucus carota	1005	294 bits (753)	5e-78	164/295 (55%)	198/295 (67%), Gaps = 4/295 (1%)	-1
Singletons43293	309	gb	AAT08673.1	nucleoporin	Hyacinthus orientalis	161	171 bits (433)	2e-41	82/102 (80%)	91/102 (89%)	+2
Singletons7434	625	emb	CBI34639.1	unnamed protein product	Vitis vinifera	1047	211 bits (536)	5e-53	110/209 (52%)	137/209 (65%), Gaps = 2/209 (0%)	-3
FXQQ4OB01ENKBB		ref	NP_178048.2	NUA (NUCLEAR PORE ANCHOR)	Arabidopsis thaliana	2093	71.2 bits (173)	3e-11	46/125 (36%)	64/125 (51%), Gaps = 42/125 (33%)	-2
Singletons22306	4224	emb	CBI24130.1	unnamed protein product	Vitis vinifera	2088	1441 bits (3730)	0.0	771/1384 (55%)	1019/1384 (73%), Gaps = 7/1384 (0%)	+3
Singletons43150	305	ref	XP_002518821.1	Nucleoprotein TPR, putative	Ricinus communis	2095	79.3 bits (194)	1e-13	42/110 (38%)	71/110 (64%), Gaps = 11/110 (10%)	-3