Home [Orchid Unigene Database]
Library Name: Contig Lists:
Contig Information:

Library Name	Query Name	Length of query
OrchidUnigene	Singletons12023	2301

Sequences View:[Singletons12023](Singleton Sequence)

Singletons12023 2301 bases 
AATTTCAAAACTTAATCATGCCATCTGGCAAAAATGGCGGCTAGTTTCGGTACAACAGCAACAAAATGAAATTATGTTTAGTCACTAAATTTTAGAAGTATCGACTGCTGAGGGACTGACCTGAACCTTCACTCATCAACATGTGATGCAGAATGGGTTGGGAATCTCCACATGATATCAGCCCAGGTGCTTTGACCATCTGTAACTTCCTTCACCACAGAAGCCACTTCATCAATTCTCACACGAATTTGCTCCTTGCTATCTCTCTCGCGTATTGTCACACTTGAAGTGGAGTCGACGGTGATTGCGAAAGGAACACCAATCTCATCCGTCCTTGCATAGCGCTTCCCTATCGATGTGCCAGTGATGTCAATAATATGAGATATCCCAGCAGACCTCAGGGATCTCGCAATGACTTTGGCCACCTCATCGAACTGCTGGCTCTTGATCAGAGGAAAAACAGTGCATTTGATAGGAGCTACGAGAGGAGGAAATCTGAACACATTCAGTTGCTCGTCTTCCGACTTGCTTGGCCTTGTATAGAAGGAATGCTCAAAGAGGCAGTAAATAATCCGTCCGATACCAAAGGAAGGCTCGATAACAGATGGAGTAAAGACCCGCTGGTGCTCCTTTTTCTTTTCGATGCTGATTGAGACCATGTTTTTCTTTATAATGACTGATTTGCCCAGAGTGCAAACTTCAAATTCTACTTCTCCTTTAGATTCAAGCGCAGCTTTTATTTCTAAAGCTTCTGCATGGTTCAGGGCCTCTAATGCTTCAACGACCATCTTTTGGTTGCCCTTGAATGCAAGGCCCAACTCTTTCTTTGATGGAGTAATCACTAGCTTCTCAACTTCTCTGGGTTCTGGATACTTCTCATGAGCAACCAGCGGAACACCACTTTTGTCCGTATGAGCACGTAAATCATAGGCGGATCTATCTGCAATTCCAACACATTCAATCCATCCATACGAACACTCTATCTCAGCATCCCAACAGTCTGCAGCATAGTGAGCCATCTCATTTGGTAAATGCTGCCGAAAACGAAGGCGTTCTTTGTCGATACCAAGGCGGGTCAGGAAGAGGTATACTCTCCCAATAAAGTAACCGAGAGTCTCATTGTTGACGGTTCCCTTCCTAACAGCTTCTCCAATAACCATTGGTTTTGCTGATTCGCCTGTCATTTGCAGTTCCCTTGGAAACATCAGGAACTCTATGTCAGCCACATCAACAAACTTAGGATGGGATTTGTCTTCAGGATCCACAAAATGCTCAATCTCTGCCAATGTGAACTCACGAACTCTCAGCAGGCCTTGCCTTGGTGAAATCTCATTTCGGAAGGCCTGTCCAATCTGAGCTGCTGCAAATGGAAGTCTGTTGCCATTGTAATAATACAGATCCTTAAAATTAACAAAGATGCCCTGTGCCGTCTCTGGTCTCATATACCCAGGGCTCAAACCGGATGGACCAATCGAAGTTTGAAACATGAGATTAAAGGGGTAAGGATCAGAGAGAGGGCTCTTGGTATCAGGAGCGGTGATATCATACTCCTTCAGCTTTGCACCCAGTTCCTCGGCAGACAAGTCGTCCAAACCAGCCAAAACATGCTTCAATTCAGCTACCTTCACAGATGAAAGTGTGGAATCTTTCTCTAGTTTCTCCTTGCAAAAGTCTTTGAGCAAATGATCAGCCCGATAGCACGATCCTGTCTTTTCATCCTTCACCATTAAGTCCGTGAACTTCTCTACGTGCCCCGACGCCTTCAGGACTACCTCTGGCGTAACGCAAGGGCAGTCCACCTCGAGCATGTTCTCCTCCAAAACAAAATGCTGGCGCCAAAAGGCGAGGACATTGGACTTAATGGCACACCCAGGAGGGCCGTAGTCATAGAGGCCAGCGACGCCTCGGTAGATCTTGAAAGAGGGTATATAGAAGAGTCTCCGCTCCAGCGTATTCACGACCACTTGGCGGAAAGCCTCGCGATCGCCGGAGACGCCAGCACTGCTGCTGACAATAGCCTGGAGATGTTTAGCAACGGCTGAGACCTCCATCTTGAGGGCCTTGAGTGACTCGATGGCAGCCTCAATGTCCACCGGCGCGGCCGCTTCCGCCTTGAGCTTCCGCACGATGTCAGCCTGTAAATCAACGGAGGCCTGCTTCTCCGCTAGGATGCCGCGCAAAGTGTCCTCGGAGGCATCGCCGGCATCCATCTGAGGTTTTACGGTGGCGTAGGGGGAGAACAGATGGGGGAAGCGGCGGCGGTTTGTCAAGAAGAGAGTGATGATAGGTTTGCTGTAAACG

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
emb	CBI15763.1	unnamed protein product	Vitis vinifera	687	1111 bits (2874)	0.0	551/686 (80%)	606/686 (88%)	-2

KEGG Pathway	GO
NoContigFind[1 Pathway]	NoContigFind[10 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Genetic Information Processing	Translation	00970	Aminoacyl-tRNA biosynthesis	[PATH:ath00970]	Singletons12023	AT1G29880	OrchidUnigene

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT1G29880	AT1G29880	ATP binding	GO:0005524	nucleotide binding
AT1G29880	AT1G29880	glycine-tRNA ligase activity	GO:0004820	other enzyme activity
AT1G29880	AT1G29880	nucleotide binding	GO:0000166	nucleotide binding
AT1G29880	AT1G29880	aminoacyl-tRNA ligase activity	GO:0004812	other enzyme activity
AT1G29880	AT1G29880	response to cadmium ion	GO:0046686	other biological processes
AT1G29880	AT1G29880	mitochondrion	GO:0005739	mitochondria
AT1G29880	AT1G29880	glycine-tRNA ligase activity	GO:0004820	other enzyme activity
AT1G29880	AT1G29880	glycyl-tRNA aminoacylation	GO:0006426	protein metabolism
AT1G29880	AT1G29880	glycyl-tRNA aminoacylation	GO:0006426	other cellular processes
AT1G29880	AT1G29880	glycyl-tRNA aminoacylation	GO:0006426	other metabolic processes

Gene Network Informations
Gene Network	Interact with..
Singletons12023[interact with..]	ConsensusfromContig2719 ConsensusfromContig5405 FXQQ4OB02FM07J Singletons20608

Query Name	Length of query	GenBank	Accession number(Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
ConsensusfromContig2719_Average_coverage__1.08	426	emb	CAL69911.1	obtusifoliol-14-demethylase	Petunia x hybrida	492	228 bits (582)	1e-58	105/118 (88%)	113/118 (95%)	-1
ConsensusfromContig5405_Average_coverage__1.89	237	gb	ACN30931.1	unknown	Zea mays	490	143 bits (360)	7e-33	69/77 (89%)	74/77 (96%)	+3
FXQQ4OB02FM07J		gb	AAT12274.1	obtusifoliol 14alpha-demethylase	Solanum chacoense	487	115 bits (289)	4e-32	56/67 (83%)	62/67 (92%), Gaps = 1/67 (1%)	+3
Singletons20608	1822	gb	AAT12274.1	obtusifoliol 14alpha-demethylase	Solanum chacoense	487	780 bits (2015)	0.0	379/488 (77%)	431/488 (88%)	+2