Home   [Orchid Unigene Database]
Library Name:       Contig Lists:  
Contig Information:
Library NameQuery NameLength of query
OrchidUnigeneFXQQ4OB01A1U04





Sequences View:[FXQQ4OB01A1U04](Singleton Sequence)


Contig Annotation:
GenBankAccession number
(Best hits in the GenBank)
AnnotationSpeciesLength of homologous protein(Amino Acid)ScoreExpect valueIdentitiessimilarityFrame
dbjBAA85401.1 unnamed protein product Oryza sativa Japonica Group908105 bits (263)1e-2147/57 (82%)52/57 (91%) -3


KEGG PathwayGO
NoContigFind[1 Pathway]NoContigFind[7 GoTerm]

Pathway Informations
First-level termsSecond-level termsKEGG pathway NumKEGG pathway NameKEGG pathway Description contig NamelocusNameproject Name
Genetic Information ProcessingFolding, Sorting and Degradation03018RNA degradation[PATH:ath03018]FXQQ4OB01A1U04AT2G17510OrchidUnigene

GO Informations
Locus NameGo NameGo Class DescriptionsGO idAnotations01
AT2G17510AT2G17510RNA bindingGO:0003723DNA or RNA binding
AT2G17510AT2G17510ribonuclease activityGO:0004540hydrolase activity
AT2G17510AT2G17510RNA bindingGO:0003723DNA or RNA binding
AT2G17510AT2G17510ribonuclease activityGO:0004540hydrolase activity
AT2G17510AT2G17510RNA bindingGO:0003723DNA or RNA binding
AT2G17510AT2G17510ribonuclease activityGO:0004540hydrolase activity
AT2G17510AT2G17510endomembrane systemGO:0012505other cellular components

Gene Network Informations
Gene NetworkInteract with..
FXQQ4OB01A1U04[interact with..]ConsensusfromContig5442
ConsensusfromContig5589
FXQQ4OB01EZ1Y6
Singletons19629
ConsensusfromContig1641
ConsensusfromContig2823
ConsensusfromContig3854
contig04557
EFCP007_F02
Singletons48210
ConsensusfromContig3700
FEVCPS021_A01_PDNR-F
Singletons45984
contig06353
FXQQ4OB01A1U04
FXQQ4OB01DZJHE
FXQQ4OB02H54ZZ
Singletons21589
Singletons32614
Singletons47537

Query NameLength of queryGenBankAccession number(Best hits in the GenBank)AnnotationSpeciesLength of homologous protein(Amino Acid)ScoreExpect valueIdentitiessimilarityFrame
ConsensusfromContig5442_Average_coverage__2.00237embCBI32318.1 unnamed protein product Vitis vinifera320149 bits (377)8e-3569/79 (87%)74/79 (93%) -1
ConsensusfromContig5589_Average_coverage__1.91233refXP_002524799.1 rrp4, putative Ricinus communis32265.1 bits (157)2e-0935/80 (43%)50/80 (62%), Gaps = 3/80 (3%) +2
FXQQ4OB01EZ1Y6gbEEE55452.1 hypothetical protein OsJ_03610 Oryza sativa Japonica Group428109 bits (272)9e-2354/57 (94%)56/57 (98%) +1
Singletons196291225embCBI32318.1 unnamed protein product Vitis vinifera320408 bits (1049)e-112214/323 (66%)245/323 (75%), Gaps = 3/323 (0%) +3
ConsensusfromContig1641_Average_coverage__1.46618gbABF98527.1 Phosphoglucomutase, cytoplasmic 2, putative, expressed Oryza sativa (japonica cultivar-group)505379 bits (972)e-103186/205 (90%)193/205 (94%) -3
ConsensusfromContig2823_Average_coverage__1.87305refXP_002527783.1 phosphoglucomutase, putative Ricinus communis58198.6 bits (244)2e-1950/53 (94%)51/53 (96%) +2
ConsensusfromContig3854_Average_coverage__2.31437refXP_002527783.1 phosphoglucomutase, putative Ricinus communis581277 bits (708)3e-73136/145 (93%)140/145 (96%) -1
contig04557251refXP_002315869.1 predicted protein Populus trichocarpa582117 bits (292)5e-2555/67 (82%)61/67 (91%) -1
EFCP007_F02_sp|Q9M4G4|PGMU_SOLTU_Phosphoglucomutase,cytoplasmic_(Glucose_phosphomutase)_(PGM)881refXP_002527783.1 phosphoglucomutase, putative Ricinus communis581239 bits (609)e-102112/131 (85%)121/131 (92%) +3
Singletons48210809spQ9SM60.1PGMC_PEA RecName: Full=Phosphoglucomutase, cytoplasmic; Short=PGM; AltName: Full=Glucose phosphomutase582463 bits (1192)e-129222/269 (82%)244/269 (90%) +3
ConsensusfromContig3700_Average_coverage__2.01329refXP_002532120.1 50S ribosomal protein L13, putative Ricinus communis245116 bits (290)9e-2553/63 (84%)58/63 (92%) -2
FEVCPS021_A01_PDNR-F898embCBI20115.1 unnamed protein product Vitis vinifera374319 bits (818)2e-85151/190 (79%)170/190 (89%) +1
Singletons45984440embCBI20115.1 unnamed protein product Vitis vinifera374210 bits (534)5e-5398/124 (79%)112/124 (90%) +2
contig06353263refXP_002465933.1 hypothetical protein SORBIDRAFT_01g048480 Sorghum bicolor934157 bits (398)3e-3774/85 (87%)80/85 (94%) +3
FXQQ4OB01A1U04dbjBAA85401.1 unnamed protein product Oryza sativa Japonica Group908105 bits (263)1e-2147/57 (82%)52/57 (91%) -3
FXQQ4OB01DZJHEdbjBAA85401.1 unnamed protein product Oryza sativa Japonica Group908163 bits (412)7e-3976/84 (90%)81/84 (96%) +1
FXQQ4OB02H54ZZrefXP_002465933.1 hypothetical protein SORBIDRAFT_01g048480 Sorghum bicolor934104 bits (259)4e-2152/72 (72%)57/72 (79%) +3
Singletons215892040refXP_002276939.1 PREDICTED: hypothetical protein isoform 2 Vitis vinifera9371085 bits (2807)0.0537/658 (81%)583/658 (88%), Gaps = 1/658 (0%) +3
Singletons32614144gbACA04866.1 putative mitotic control protein dis3 Picea abies4674.7 bits (182)3e-1232/39 (82%)38/39 (97%) -3
Singletons47537627refNP_001048846.1 Os03g0129200 Oryza sativa (japonica cultivar-group)896317 bits (812)5e-85153/197 (77%)174/197 (88%) +3