Contig View

Back [Phalaenopsis Transcriptome]

Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
FPTEVCPM	FPTEVCPM077_B01_PDNR-F	1088

Contig Map:

(ProjectName=FPTEVCPM
SequenceName=NoContigFind):

Sequences View:[NoContigFind](Contig Seguence)

Sequences View:[FPTEVCPM077_B01_PDNR-F](Singleton Sequence)

FPTEVCPM077_B01_PDNR-F 1088  bases 
GTTGATCTTGCTATACTGGCTGGATTATCACCAGCTGCTGTTTTGTGTGAAATTGTTGATGATGATGGTTCCATGGCACGCTTGCCAAAGCTTAGAGAATTTGCTGAAAGAGAAAGTATGAAAATCATCTCAATTGCGGACTTGATTAGGTATAGGAGGAAGAGAGATAAGCTGGTTGAGCGTGCTTCTGTTGCACGCTTACCTTTATCATGGGGTACATTCCAGGCCTATTGTTATAGGTCTTTGGTGGATGGGATAGAGCATATTGCCATGGTCAAAGGTGATATTGGTGATGGACATGGCATACTGGTGAGAGTGCATTCTGAATGCCTCACTGGCGACATATTTGGTTCGGCCAGATGTGATTGTGGTTCCCAGTTGGAAATGGCCATGAAGCACATTGAAAGAGCTGGCAGGGGTGTATTGGTTTACCTCCGTGGCCATGAGGGAAGGGGCATTGGCTTAGGTCATAAGCTTCGTGCTTATAACTTGCAGGACAACGGGCGTGATACTGTGGAAGCCAATGAGGAATTAGGTTTGCCTGTTGATTCAAGGGAATATGGCATCGGTGCACAGATATTGCAGGATCTCGGTGTCCGCACAATGAGGTTGATGACCAATAACCCTGCTAAGTACAGCGGCTTGAAAGGCTATGGGTTGAGCATCGTCGAGAAGGTTACCCTGCCAACCCTTATTACAAATGAGAACAAAAGGTACTTGGAGACTAAGCGGCTAAAGATGGGGCATGTCTATGGATCTGAATTCAATGGAAAGTTGCGTGAGTTGATCAAAGATGTGGATGAAGCGAGCACTCAGCAGCATTCCTCATGATGCCAATAGGTGGAAGCAATTTGTAATGAGTTATTTACCATTGCACTTTTATAATCTTGAAATTCTGTGTGGTATTTGGACTGAAATGCCGTCCTGGAATGGTTTTTTAATCAACTCAAATGGGATCTAGAAATCCTGTGTATGCCGATTTAGGGCTGTATCATACCATTCAGTAGATTTAAATTAATCTTTTCAGATAGTAAATTCAGATTAATAAATTCGATTGCTTACAAAAAAAAAAAAAAAAAAAAAAAAAA

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
ref	XP_002298707.1	predicted protein	Populus trichocarpa	552	441 bits (1133)	e-122	213/263 (80%)	237/263 (90%)	+1

KEGG Pathway	GO
NoContigFind[1 Pathway]	NoContigFind[26 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Metabolism	Metabo lism of Cofactors and Vitamins	00740	Riboflavin metabolism	[PATH:ath00740]	FPTEVCPM077_B01_PDNR-F	AT5G64300	FPTEVCPM

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT5G64300	AT5G64300	chloroplast	GO:0009507	chloroplast
AT5G64300	AT5G64300	membrane	GO:0016020	other membranes
AT5G64300	AT5G64300	"3,4-dihydroxy-2-butanone-4-phosphate synthase activity"	GO:0008686	other enzyme activity
AT5G64300	AT5G64300	"3,4-dihydroxy-2-butanone-4-phosphate synthase activity"	GO:0008686	other enzyme activity
AT5G64300	AT5G64300	GTP cyclohydrolase II activity	GO:0003935	hydrolase activity
AT5G64300	AT5G64300	GTP cyclohydrolase II activity	GO:0003935	hydrolase activity
AT5G64300	AT5G64300	GTP cyclohydrolase II activity	GO:0003935	hydrolase activity
AT5G64300	AT5G64300	riboflavin biosynthetic process	GO:0009231	other cellular processes
AT5G64300	AT5G64300	riboflavin biosynthetic process	GO:0009231	other cellular processes
AT5G64300	AT5G64300	riboflavin biosynthetic process	GO:0009231	other metabolic processes
AT5G64300	AT5G64300	riboflavin biosynthetic process	GO:0009231	other metabolic processes
AT5G64300	AT5G64300	riboflavin biosynthetic process	GO:0009231	other cellular processes
AT5G64300	AT5G64300	riboflavin biosynthetic process	GO:0009231	other metabolic processes
AT5G64300	AT5G64300	chloroplast	GO:0009507	chloroplast
AT5G64300	AT5G64300	membrane	GO:0016020	other membranes
AT5G64300	AT5G64300	"3,4-dihydroxy-2-butanone-4-phosphate synthase activity"	GO:0008686	other enzyme activity
AT5G64300	AT5G64300	"3,4-dihydroxy-2-butanone-4-phosphate synthase activity"	GO:0008686	other enzyme activity
AT5G64300	AT5G64300	GTP cyclohydrolase II activity	GO:0003935	hydrolase activity
AT5G64300	AT5G64300	GTP cyclohydrolase II activity	GO:0003935	hydrolase activity
AT5G64300	AT5G64300	GTP cyclohydrolase II activity	GO:0003935	hydrolase activity
AT5G64300	AT5G64300	riboflavin biosynthetic process	GO:0009231	other cellular processes
AT5G64300	AT5G64300	riboflavin biosynthetic process	GO:0009231	other cellular processes
AT5G64300	AT5G64300	riboflavin biosynthetic process	GO:0009231	other metabolic processes
AT5G64300	AT5G64300	riboflavin biosynthetic process	GO:0009231	other metabolic processes
AT5G64300	AT5G64300	riboflavin biosynthetic process	GO:0009231	other cellular processes
AT5G64300	AT5G64300	riboflavin biosynthetic process	GO:0009231	other metabolic processes

Gene Network Informations
Gene Network	Interact with..
FPTEVCPM077_B01_PDNR-F[interact with..]	Not found!