Contig View

Back [Phalaenopsis Transcriptome]

Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
FPTEVCPM	FPTEVCPM070_F11_PDNR-F	1094

Contig Map:

(ProjectName=FPTEVCPM
SequenceName=NoContigFind):

Sequences View:[NoContigFind](Contig Seguence)

Sequences View:[FPTEVCPM070_F11_PDNR-F](Singleton Sequence)

FPTEVCPM070_F11_PDNR-F 1094  bases 
GGGTTGAGGCAGAAGCGCGCCACTGGTCAGGAATACGCAGACCTTATGGAAGAATTTATGAGCGCTGTTAAGCAAAACTATGGAGAGAAAGTGCTTATACAGGTTGGTCATATTAATTGTCCAAGAACACAGGAAAATTAAAAAATCCTAACTGCGGTTTGAACTGTGTCCATTCCAATATATGTTCATTCACCTCTCAGTTTGAAGATTTTGCAAACCATAATGCATTTAGCCTACTTGAAAAGTACAGCAAAACTCATCTTGTCTTCAATGATGATATTCAGGGAACGGCTTCGGTTGTTCTAGCTGGGTTAGTTGCAGCACTGAAGGTGGTTGGTGGTAAATTGTCAAATCATACTTTCTTGTTTCTTGGTGCTGGGGAGGCTGGTACAGGGATAGCAGAACTCATAGCACTTGAGATGTCAAAACAGACAAATACTCCCATTGCTGATTGTCGTAAGAGAATCTGGCTTGTGGACTCTAAGGGCCTGATTGTCAAACCACGTTTTGAAACTCTACAACGCTTCAAAAAACCTTGGGCTCATGAACATGAATTTGTTAAGGATCTATCAGAGGCCGTGAAGGTCATCAAGCCAACAGTACTCATCGGATCTTCTGGAGTGGGCAGAACTTTCACAAGAGAAGTAGTTGAGACTATGGCTTCCTTCAATGAGAAACCTATAATCCTAGCTCTATCTAATCCAACATCTCAGTCTGAATGCACTGCTGAGGAAGCTTACACTTGGAGTAAGGGTCGAGCAATATTTGCTAGTGGGAGTCCGTTCAATCCTGTCGAATACGAAAGCAAAACTTTCCTGCCTGGGCAGGCAAACAATGCTTATATATTTCCTGGATTTGGTCTTGGTTTGATAATATCTGGAGCCATCCGTGTACATGATGACATGCTCCTTGCAGCTTCGGAAGCTCTGGCTTCACAGTGAGACAGAAAACCTTGAGACGGATCATTTATCCGCCTTTCAGACATTAGAAAGATTCAGCTGAAATGCTGCCAAAGTGCTGCCAAAGCATATGACTGTTTGCTCTCATCTCTCGCCCAAACTGTGAATATTGCAGAGAGCTACATGTACAAGTCG

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
emb	CAA56354.1	NADP dependent malic enzyme	Phaseolus vulgaris	589	382 bits (980)	e-116	206/304 (67%)	227/304 (74%), Gaps = 7/304 (2%)	+3

KEGG Pathway	GO
NoContigFind[2 Pathway]	NoContigFind[27 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Metabolism	Carbohydrate Metabolism	00620	Pyruvate metabolism	[PATH:ath00620]	FPTEVCPM070_F11_PDNR-F	AT2G19900	FPTEVCPM
Metabolism	Energy Metabolism	00710	Carbon fixation in photosynthetic organisms	[PATH:ath00710]	FPTEVCPM070_F11_PDNR-F	AT2G19900	FPTEVCPM

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT2G19900	AT2G19900	cytosol	GO:0005829	cytosol
AT2G19900	AT2G19900	malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) activity	GO:0004473	other enzyme activity
AT2G19900	AT2G19900	malic enzyme activity	GO:0004470	other enzyme activity
AT2G19900	AT2G19900	"oxidoreductase activity, acting on NADH or NADPH, NAD or NADP as acceptor"	GO:0016652	other enzyme activity
AT2G19900	AT2G19900	malate metabolic process	GO:0006108	other cellular processes
AT2G19900	AT2G19900	malate metabolic process	GO:0006108	other metabolic processes
AT2G19900	AT2G19900	malate metabolic process	GO:0006108	other cellular processes
AT2G19900	AT2G19900	malate metabolic process	GO:0006108	other metabolic processes
AT2G19900	AT2G19900	protein homooligomerization	GO:0051260	other biological processes
AT2G19900	AT2G19900	cytosol	GO:0005829	cytosol
AT2G19900	AT2G19900	malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) activity	GO:0004473	other enzyme activity
AT2G19900	AT2G19900	malic enzyme activity	GO:0004470	other enzyme activity
AT2G19900	AT2G19900	"oxidoreductase activity, acting on NADH or NADPH, NAD or NADP as acceptor"	GO:0016652	other enzyme activity
AT2G19900	AT2G19900	malate metabolic process	GO:0006108	other cellular processes
AT2G19900	AT2G19900	malate metabolic process	GO:0006108	other metabolic processes
AT2G19900	AT2G19900	malate metabolic process	GO:0006108	other cellular processes
AT2G19900	AT2G19900	malate metabolic process	GO:0006108	other metabolic processes
AT2G19900	AT2G19900	protein homooligomerization	GO:0051260	other biological processes
AT2G19900	AT2G19900	cytosol	GO:0005829	cytosol
AT2G19900	AT2G19900	malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) activity	GO:0004473	other enzyme activity
AT2G19900	AT2G19900	malic enzyme activity	GO:0004470	other enzyme activity
AT2G19900	AT2G19900	"oxidoreductase activity, acting on NADH or NADPH, NAD or NADP as acceptor"	GO:0016652	other enzyme activity
AT2G19900	AT2G19900	malate metabolic process	GO:0006108	other cellular processes
AT2G19900	AT2G19900	malate metabolic process	GO:0006108	other metabolic processes
AT2G19900	AT2G19900	malate metabolic process	GO:0006108	other cellular processes
AT2G19900	AT2G19900	malate metabolic process	GO:0006108	other metabolic processes
AT2G19900	AT2G19900	protein homooligomerization	GO:0051260	other biological processes

Gene Network Informations
Gene Network	Interact with..
FPTEVCPM070_F11_PDNR-F[interact with..]	FPTEVCPM081_A03_PDNR-F FPTEVCPM057_F09_PDNR-F

Query Name	Length of query	GenBank	Accession number(Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
FPTEVCPM081_A03_PDNR-F	453	ref	XP_002511819.1	malic enzyme, putative	Ricinus communis	602	148 bits (373)	2e-34	71/91 (78%)	82/91 (90%)	+1
FPTEVCPM057_F09_PDNR-F	1111	dbj	BAA24950.1	NADP-malic enzyme	Aloe arborescens	592	464 bits (1193)	e-128	245/350 (70%)	274/350 (78%), Gaps = 7/350 (2%)	+2