Back [Phalaenopsis Transcriptome]
Library Name:       Contig Lists:     
Contig Information:
Project NameQuery NameLength of query
FPTEVCPMFPTEVCPM040_E09_PDNR-F1067

Contig Map:
(ProjectName=FPTEVCPM
SequenceName=NoContigFind):

Sequences View:[NoContigFind](Contig Seguence)


Sequences View:[FPTEVCPM040_E09_PDNR-F](Singleton Sequence)

Contig Annotation:
GenBankAccession number
(Best hits in the GenBank)
AnnotationSpeciesLength of homologous protein(Amino Acid)ScoreExpect valueIdentitiessimilarityFrame
refXP_002529996.1 DNA-directed RNA polymerase I subunit, putative Ricinus communis1159424 bits (1089)e-116207/299 (69%)244/299 (81%), Gaps = 1/299 (0%) +1

KEGG PathwayGO
NoContigFind[3 Pathway]NoContigFind[28 GoTerm]
Pathway Informations
First-level termsSecond-level termsKEGG pathway NumKEGG pathway NameKEGG pathway Description contig NamelocusNameproject Name
Genetic Information ProcessingTranscription03020RNA polymerase[PATH:ath03020]FPTEVCPM040_E09_PDNR-FAT1G29940FPTEVCPM
MetabolismNucleotide Metabolism00230Purine metabolism[PATH:ath00230]FPTEVCPM040_E09_PDNR-FAT1G29940FPTEVCPM
MetabolismNucleotide Metabolism00240Pyrimidine metabolism[PATH:ath00240]FPTEVCPM040_E09_PDNR-FAT1G29940FPTEVCPM

GO Informations
Locus NameGo NameGo Class DescriptionsGO idAnotations01
AT1G29940AT1G29940DNA-directed RNA polymerase activityGO:0003899transferase activity
AT1G29940AT1G29940transcriptionGO:0006350transcription
AT1G29940AT1G29940nucleusGO:0005634nucleus
AT1G29940AT1G29940DNA bindingGO:0003677DNA or RNA binding
AT1G29940AT1G29940DNA-directed RNA polymerase activityGO:0003899transferase activity
AT1G29940AT1G29940transcriptionGO:0006350transcription
AT1G29940AT1G29940ribonucleoside bindingGO:0032549other binding
AT1G29940AT1G29940DNA-directed RNA polymerase activityGO:0003899transferase activity
AT1G29940AT1G29940transcriptionGO:0006350transcription
AT1G29940AT1G29940nucleusGO:0005634nucleus
AT1G29940AT1G29940DNA bindingGO:0003677DNA or RNA binding
AT1G29940AT1G29940DNA-directed RNA polymerase activityGO:0003899transferase activity
AT1G29940AT1G29940transcriptionGO:0006350transcription
AT1G29940AT1G29940ribonucleoside bindingGO:0032549other binding
AT1G29940AT1G29940DNA-directed RNA polymerase activityGO:0003899transferase activity
AT1G29940AT1G29940transcriptionGO:0006350transcription
AT1G29940AT1G29940nucleusGO:0005634nucleus
AT1G29940AT1G29940DNA bindingGO:0003677DNA or RNA binding
AT1G29940AT1G29940DNA-directed RNA polymerase activityGO:0003899transferase activity
AT1G29940AT1G29940transcriptionGO:0006350transcription
AT1G29940AT1G29940ribonucleoside bindingGO:0032549other binding
AT1G29940AT1G29940DNA-directed RNA polymerase activityGO:0003899transferase activity
AT1G29940AT1G29940transcriptionGO:0006350transcription
AT1G29940AT1G29940nucleusGO:0005634nucleus
AT1G29940AT1G29940DNA bindingGO:0003677DNA or RNA binding
AT1G29940AT1G29940DNA-directed RNA polymerase activityGO:0003899transferase activity
AT1G29940AT1G29940transcriptionGO:0006350transcription
AT1G29940AT1G29940ribonucleoside bindingGO:0032549other binding

Gene Network Informations
Gene NetworkInteract with..
FPTEVCPM040_E09_PDNR-F[interact with..]FPTEVCPM015_A03_PDNR-F
FPTEVCPM062_A08_PDNR-F
Query NameLength of queryGenBankAccession number(Best hits in the GenBank)AnnotationSpeciesLength of homologous protein(Amino Acid)ScoreExpect valueIdentitiessimilarityFrame
FPTEVCPM015_A03_PDNR-F1070dbjBAD35511.1 putative RNA polymerase A(I) large subunit Oryza sativa Japonica Group1748222 bits (565)1e-65130/284 (45%)179/284 (63%), Gaps = 27/284 (9%) +2
FPTEVCPM062_A08_PDNR-F590refXP_002267800.1 PREDICTED: hypothetical protein Vitis vinifera51108 bits (270)3e-2249/51 (96%)49/51 (96%) +3