Contig View

Back [Phalaenopsis Transcriptome]

Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
FPTEVCPM	FPTEVCPM036_A08_PDNR-F	1074

Contig Map:

(ProjectName=FPTEVCPM
SequenceName=NoContigFind):

Sequences View:[NoContigFind](Contig Seguence)

Sequences View:[FPTEVCPM036_A08_PDNR-F](Singleton Sequence)

FPTEVCPM036_A08_PDNR-F 1074  bases 
GAAGTTACTGGCACTTGGATATGGCTTTGAAGCTGCGCTTGCCGGCGGAAATGGGAGCTCTCTCTTTCTTTGAGTCCGGCAAAGGGGCTTTTACTCAACTCAAAGGATTTTCTCCAAAGAAGTGGGAGAAGGCGGCGGGATGGTCGAGGAGGGCCTGCTGCTCAATGAGTCAGCGTCCTCCGCCTCCACCGGCTTGGCCAGGTCGCGTTGTAGTTGAAGAAGGCCGAAGATCATGGGAAGGTCCAAAGCCTATAGCCATAGTTGGGTCAACTGGATCAATTGGAACACAGACATTAGACATAGTAGCTGAGAATCCAGATAAGTTCAGAGTAGTGGCTCTTGCAGCAGGATCTAATGTGACTCTTTTGGCTGATCAGGTAAAAACTTTTAAGCCTCAGCTTGTGGCTATAAGGAATCAATCAATGTTTGATGAGTTGAAAGAAGCTCTTGCTGATGCTGAGCACCAACCTGAAATAATTCCTGGGGAAGAAGGTGTCATAGAGGTTGCACGCCATCGAGATGCTGTCACAGTAGTCACTGGGATAGTAGGTTGCGCGGGGTTGAAGCCTACGGTGGCTGCGATAGAGGCCGGAAAAGACATAGCTCTGGCGAACAAGGAGACGCTCATCGCCGGAGGACCGTTCGTCCTTCCGCTTGCACATAAACACAAAGTGAAAATTCTTCCCGCAGATTCTGAACATTCTGCCATATTTCAGTGTATCCAGGGCTTGCCAGAAGGGGGACTTCGACGGATAATTTTGACTGCATCAGGCGGGGCATTTAGGGATTGGCCCGTTGAGAAGCTCAGAGAAGTCAAAGTTGCTGATGCTTTGAAGCATCCAAATTGGAATATGGGAAAGAAGATTACTGTAGATTCTGCTACTCTTTTCAACAAGGGTTTGGAGGTAATTGAGGCACACTATCTTTATGGGGCTGGATATGATTCCATTGAGATACTAATCCACCCCCAATCAATCATACACTCATGATGAAACACAGATTCTTCAATTTTGGCTCAGTTGGGATGGCCTGATATGCGCTACCTATCCTTTATACAATGTCTTGGCCAGATGA

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
gb	ABX57721.1	1-deoxy-D-xylulose 5-phosphate reductoisomerase	Vanda hybrid cultivar	473	593 bits (1530)	e-168	305/342 (89%)	311/342 (90%), Gaps = 2/342 (0%)	+3

KEGG Pathway	GO
NoContigFind[1 Pathway]	NoContigFind[42 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Metabolism	Metabolism of Terpenoids and Polyketides	00900	Terpenoid backbone biosynthesis	[PATH:ath00900]	FPTEVCPM036_A08_PDNR-F	AT5G62790	FPTEVCPM

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT5G62790	AT5G62790	chloroplast	GO:0009507	chloroplast
AT5G62790	AT5G62790	chloroplast stroma	GO:0009570	plastid
AT5G62790	AT5G62790	chloroplast stroma	GO:0009570	chloroplast
AT5G62790	AT5G62790	chloroplast stroma	GO:0009570	other cytoplasmic components
AT5G62790	AT5G62790	chloroplast stroma	GO:0009570	other intracellular components
AT5G62790	AT5G62790	response to cadmium ion	GO:0046686	other biological processes
AT5G62790	AT5G62790	chloroplast	GO:0009507	chloroplast
AT5G62790	AT5G62790	isoprenoid biosynthetic process	GO:0008299	other cellular processes
AT5G62790	AT5G62790	isoprenoid biosynthetic process	GO:0008299	other metabolic processes
AT5G62790	AT5G62790	"isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway"	GO:0019288	other cellular processes
AT5G62790	AT5G62790	"isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway"	GO:0019288	other metabolic processes
AT5G62790	AT5G62790	"isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway"	GO:0019288	other cellular processes
AT5G62790	AT5G62790	"isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway"	GO:0019288	other metabolic processes
AT5G62790	AT5G62790	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity	GO:0030604	other enzyme activity
AT5G62790	AT5G62790	chloroplast	GO:0009507	chloroplast
AT5G62790	AT5G62790	chloroplast stroma	GO:0009570	plastid
AT5G62790	AT5G62790	chloroplast stroma	GO:0009570	chloroplast
AT5G62790	AT5G62790	chloroplast stroma	GO:0009570	other cytoplasmic components
AT5G62790	AT5G62790	chloroplast stroma	GO:0009570	other intracellular components
AT5G62790	AT5G62790	response to cadmium ion	GO:0046686	other biological processes
AT5G62790	AT5G62790	chloroplast	GO:0009507	chloroplast
AT5G62790	AT5G62790	isoprenoid biosynthetic process	GO:0008299	other cellular processes
AT5G62790	AT5G62790	isoprenoid biosynthetic process	GO:0008299	other metabolic processes
AT5G62790	AT5G62790	"isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway"	GO:0019288	other cellular processes
AT5G62790	AT5G62790	"isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway"	GO:0019288	other metabolic processes
AT5G62790	AT5G62790	"isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway"	GO:0019288	other cellular processes
AT5G62790	AT5G62790	"isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway"	GO:0019288	other metabolic processes
AT5G62790	AT5G62790	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity	GO:0030604	other enzyme activity
AT5G62790	AT5G62790	chloroplast	GO:0009507	chloroplast
AT5G62790	AT5G62790	chloroplast stroma	GO:0009570	plastid
AT5G62790	AT5G62790	chloroplast stroma	GO:0009570	chloroplast
AT5G62790	AT5G62790	chloroplast stroma	GO:0009570	other cytoplasmic components
AT5G62790	AT5G62790	chloroplast stroma	GO:0009570	other intracellular components
AT5G62790	AT5G62790	response to cadmium ion	GO:0046686	other biological processes
AT5G62790	AT5G62790	chloroplast	GO:0009507	chloroplast
AT5G62790	AT5G62790	isoprenoid biosynthetic process	GO:0008299	other cellular processes
AT5G62790	AT5G62790	isoprenoid biosynthetic process	GO:0008299	other metabolic processes
AT5G62790	AT5G62790	"isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway"	GO:0019288	other cellular processes
AT5G62790	AT5G62790	"isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway"	GO:0019288	other metabolic processes
AT5G62790	AT5G62790	"isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway"	GO:0019288	other cellular processes
AT5G62790	AT5G62790	"isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway"	GO:0019288	other metabolic processes
AT5G62790	AT5G62790	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity	GO:0030604	other enzyme activity

Gene Network Informations
Gene Network	Interact with..
FPTEVCPM036_A08_PDNR-F[interact with..]	Not found!