Contig View

Back [Phalaenopsis Transcriptome]

Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
FPTEVCPM	FPTEVCPM013_D02_PDNR-F	1088

Contig Map:

(ProjectName=FPTEVCPM
SequenceName=NoContigFind):

Sequences View:[NoContigFind](Contig Seguence)

Sequences View:[FPTEVCPM013_D02_PDNR-F](Singleton Sequence)

FPTEVCPM013_D02_PDNR-F 1088  bases 
GGACCGAATGGTTATGCTTGCTAAAGCTCTTGAATATGATAACTTTGATAAATTTGACCGTGTCCGTTTTCCAAAGATTAGATATGCTGGAATGCTTCAATATGATGGCGAATTAAAGCTTCCAAACCATTATCTTGTTTCTCCTCCCGAGATAGATAGGACATCAGGTCAATACCTTGTGAAGAATGGTATTCGTACTTTCGCTTGCAGTGAGACAGTGAAGTTTGGTCATGTCACCTTTTTCTGGAATGGAAATCGATCTGGATGCTTTGATTCAACACTGGAAGAGTATGTTGAAATTCCAAGTGATGTTGGAATCACCTTTAACGTTCAGCCTAAAATGAAGGCACTTGAAATTGCCGAGAAGGCAAGGGATGCTACTCTCAGCGGCAATTTTGACCAGGTACGAGTTAATATACCGAACGGTGACATGGTAGGACACACTGGTGATATTGAGGCTACCACTGTGGCTTGTGAGGCTGCAGATGTAGCTGTAAAGATGATTCTTGATGCCATTGTGCAAGTGGGTGGCATCTATGTTGTCACTGCAGATCATGGCAATGCTGAGGACATGGTGAAAAGGGGTAAATCTGGGCAGCCAATTTTTGACAAAGAAGGGAAAGTTCAAATTCTCACCTCTCATACCCTTCAACCGGTTCCTATCGCCATCGGCGGCCCCGGCTTGAGTCCCGGTGTTCGTTTCCGGAGTGATGTGCCAGATGGTGGCCTTGCCAATGTTGCTGCTACTGTGCTGAACTTCCATGGATTTGATGCACCCAGTGACTATGAAACCACCCTAATTGAAGTAGTTGAGAACTAAATATACTGTGTAATTTTCTATTTATAATATGCTAATATGATTTTTATATTACTTAAGCTCATAGAAAATCTTAAAATAAGTTTACTCCATTGAACTGGAGATGGTCTTGAGGTTGCCGGTGGTCAAAGTTTGGGCTGTGTCATTGTAGGTTGTATTAATGGTGTGGAGTTTCTCCCACAATGACTTTCTTGCTTTGAATATTTACGTTACTTTTGAAGGATGTTTTTTGCTTAAAGTTTCCAAAAAAAAAAAAAAAAAAAAAAAAAAA

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
ref	XP_002519975.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	Ricinus communis	560	483 bits (1243)	e-134	233/272 (85%)	252/272 (92%)	+2

KEGG Pathway	GO
NoContigFind[1 Pathway]	NoContigFind[51 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Metabolism	Carbohydrate Metabolism	00010	Glycolysis / Gluconeogenesis	[PATH:ath00010]	FPTEVCPM013_D02_PDNR-F	AT1G09780	FPTEVCPM

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT1G09780	AT1G09780	chloroplast	GO:0009507	chloroplast
AT1G09780	AT1G09780	plasma membrane	GO:0005886	plasma membrane
AT1G09780	AT1G09780	plasma membrane	GO:0005886	plasma membrane
AT1G09780	AT1G09780	catalytic activity	GO:0003824	other enzyme activity
AT1G09780	AT1G09780	phosphoglycerate mutase activity	GO:0004619	other enzyme activity
AT1G09780	AT1G09780	manganese ion binding	GO:0030145	other binding
AT1G09780	AT1G09780	response to cadmium ion	GO:0046686	other biological processes
AT1G09780	AT1G09780	metal ion binding	GO:0046872	other binding
AT1G09780	AT1G09780	cytosol	GO:0005829	cytosol
AT1G09780	AT1G09780	mitochondrial envelope	GO:0005740	mitochondria
AT1G09780	AT1G09780	mitochondrial envelope	GO:0005740	other cytoplasmic components
AT1G09780	AT1G09780	mitochondrial envelope	GO:0005740	other intracellular components
AT1G09780	AT1G09780	response to cold	GO:0009409	response to stress
AT1G09780	AT1G09780	response to cold	GO:0009409	response to stress
AT1G09780	AT1G09780	response to cold	GO:0009409	response to abiotic or biotic stimulus
AT1G09780	AT1G09780	response to cold	GO:0009409	response to abiotic or biotic stimulus
AT1G09780	AT1G09780	"2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity"	GO:0046537	other enzyme activity
AT1G09780	AT1G09780	chloroplast	GO:0009507	chloroplast
AT1G09780	AT1G09780	plasma membrane	GO:0005886	plasma membrane
AT1G09780	AT1G09780	plasma membrane	GO:0005886	plasma membrane
AT1G09780	AT1G09780	catalytic activity	GO:0003824	other enzyme activity
AT1G09780	AT1G09780	phosphoglycerate mutase activity	GO:0004619	other enzyme activity
AT1G09780	AT1G09780	manganese ion binding	GO:0030145	other binding
AT1G09780	AT1G09780	response to cadmium ion	GO:0046686	other biological processes
AT1G09780	AT1G09780	metal ion binding	GO:0046872	other binding
AT1G09780	AT1G09780	cytosol	GO:0005829	cytosol
AT1G09780	AT1G09780	mitochondrial envelope	GO:0005740	mitochondria
AT1G09780	AT1G09780	mitochondrial envelope	GO:0005740	other cytoplasmic components
AT1G09780	AT1G09780	mitochondrial envelope	GO:0005740	other intracellular components
AT1G09780	AT1G09780	response to cold	GO:0009409	response to stress
AT1G09780	AT1G09780	response to cold	GO:0009409	response to stress
AT1G09780	AT1G09780	response to cold	GO:0009409	response to abiotic or biotic stimulus
AT1G09780	AT1G09780	response to cold	GO:0009409	response to abiotic or biotic stimulus
AT1G09780	AT1G09780	"2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity"	GO:0046537	other enzyme activity
AT1G09780	AT1G09780	chloroplast	GO:0009507	chloroplast
AT1G09780	AT1G09780	plasma membrane	GO:0005886	plasma membrane
AT1G09780	AT1G09780	plasma membrane	GO:0005886	plasma membrane
AT1G09780	AT1G09780	catalytic activity	GO:0003824	other enzyme activity
AT1G09780	AT1G09780	phosphoglycerate mutase activity	GO:0004619	other enzyme activity
AT1G09780	AT1G09780	manganese ion binding	GO:0030145	other binding
AT1G09780	AT1G09780	response to cadmium ion	GO:0046686	other biological processes
AT1G09780	AT1G09780	metal ion binding	GO:0046872	other binding
AT1G09780	AT1G09780	cytosol	GO:0005829	cytosol
AT1G09780	AT1G09780	mitochondrial envelope	GO:0005740	mitochondria
AT1G09780	AT1G09780	mitochondrial envelope	GO:0005740	other cytoplasmic components
AT1G09780	AT1G09780	mitochondrial envelope	GO:0005740	other intracellular components
AT1G09780	AT1G09780	response to cold	GO:0009409	response to stress
AT1G09780	AT1G09780	response to cold	GO:0009409	response to stress
AT1G09780	AT1G09780	response to cold	GO:0009409	response to abiotic or biotic stimulus
AT1G09780	AT1G09780	response to cold	GO:0009409	response to abiotic or biotic stimulus
AT1G09780	AT1G09780	"2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity"	GO:0046537	other enzyme activity

Gene Network Informations
Gene Network	Interact with..
FPTEVCPM013_D02_PDNR-F[interact with..]	Not found!