Contig View

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Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
FPTEVCPM	Contig1123	1596

Contig Map:

(ProjectName=FPTEVCPM SequenceName=Contig1123):
FPTEVCPM035_D06_PDNR-F:
FPTEVCPM061_F07_PDNR-F:

Sequences View:[Contig1123](Contig Seguence)

1596 bases 
GTCCAATCATTCTAACCGGCTTCTCTGCCCTGAATAAACTTCTTGGCCGTGAAGTCTACAGTTCCCACATGCAGCTTGGTGGCCCAAAAATAATGGCGACAAATGGGGTCGTTCATCTGACGGTTCCTGATGATCTTCAGGGTGTTTCAGCAATCCTCAAGTGGCTCAGCTATGTTCCTCCTTATGTTGGGGGACCTCTTCCTATATCAGGTTCGTTGGACCCGCCACTGAGACCAGTGGAATACACACCTGAGAACTTGTGTGACCCTCGTGCCACCATCAGCGGGATAAAGGATGGCAGCGGTAAGTGGTTAGGTGGGATCTTTGACAAAGATAGCTTTGTTGAAACACTCGAAGGTTGGGCCAAGACGGTGGTCACCGGGAGAGCAAAGCTGGGCGGAATTCCTGTTGGGGTTATTGCAGTAGAGACTCAGACTGTTATGCAAGTCATCCCTGCTGATCCTGGCCAACTTGACTCACATGAAAGAGTCGTGCCTCAAGCCGGGCAAGTCTGGTTCCCTGATTCTGCCACCAAGACTGCACAGGCATTGATGGACTTCAACAGGGAGGAGCTGCCCCTCTTCATCCTTGCAAATTGGAGAGGCTTTTCAGGCGGACAAAGGGACCTCTTTGAAGGTATTTTGCAGGCAGGTTCCACCATTGTTGAGAACTTGAGGACTTACAAGCAACCAGCCTTTGTTTACATCCCTATGATGGCGGAACTCCGCGGCGGAGCCTGGGTTGTGGTGGACAGCAAGATCAATCCAGAACAGATTGAGATGTATGCCGAAAGAACTGCCAAGGGAAATGTGCTTGAACCTGAAGGGATGATTGAGATCAAGTTCAGGCCGAAAGAGATTTTGGATTGCATGGGGAGGCTCGATCAAGAGCTGATCTCTCTTAAAACAAAGCTTCAAGAGGCCAAGTTGGGAAGTGCAGGCCGTGAGTCTGTGGATTCCCTTCAGAAGAGTATTTCTGCTCGCGAGAAACAACTCCTGCCTGTTTACACTCAGATAGCTACGAAGTTTGCAGAATTACATGATACTTCTCTGCGAATGGCTGCGAAGGGCGTGGTCAAAGAGGTGGTTGACTGGAAGGGCTCGCGAGCTTTCTTCTATAAGAGATTGAGCAGGAGAGTGTCCGAGCGGTCGCTTATAAAATCGGTGATGGATGCTTCAGGGGAGGAATTGTCAAACCAGTCTGCACTTGAGCTCATCAAGAGTTGGGTCTCGGCTTCTGGGGTGAACTGGGAGGATGATGGAGCTTTCTCTGCTTGGAAAAATGATCCTCTGAACTATGAAAATCATCTGAAACAGCTGAGAGCTAAGAAAATATTTTCTCAGCTCTCCAGCCTTGGAGAATCATCTTCATCTGACCTGGAAGCTCTTAAGCAAGGTCTTCATGTCCTTCTCTCCAAGGTTGAGCCTTCGAGTCGAGCAGAGTTGATAGAGGAATTTCAGAAATTAGCTGGCTGATTAAACTTGATTTGAAATTGAATTTATTTTGGTATGTATGAAATAATTCATTTACAGCAGATAGCCTAGATTCTTGCTGAATGGCTGAAAGTGCTGGGATAGTTCTTCCTTGGCCACCGGG

Sequences View:[Contig1123](Singleton Sequence)

Contig1123 1596  bases 
GTCCAATCATTCTAACCGGCTTCTCTGCCCTGAATAAACTTCTTGGCCGTGAAGTCTACAGTTCCCACATGCAGCTTGGTGGCCCAAAAATAATGGCGACAAATGGGGTCGTTCATCTGACGGTTCCTGATGATCTTCAGGGTGTTTCAGCAATCCTCAAGTGGCTCAGCTATGTTCCTCCTTATGTTGGGGGACCTCTTCCTATATCAGGTTCGTTGGACCCGCCACTGAGACCAGTGGAATACACACCTGAGAACTTGTGTGACCCTCGTGCCACCATCAGCGGGATAAAGGATGGCAGCGGTAAGTGGTTAGGTGGGATCTTTGACAAAGATAGCTTTGTTGAAACACTCGAAGGTTGGGCCAAGACGGTGGTCACCGGGAGAGCAAAGCTGGGCGGAATTCCTGTTGGGGTTATTGCAGTAGAGACTCAGACTGTTATGCAAGTCATCCCTGCTGATCCTGGCCAACTTGACTCACATGAAAGAGTCGTGCCTCAAGCCGGGCAAGTCTGGTTCCCTGATTCTGCCACCAAGACTGCACAGGCATTGATGGACTTCAACAGGGAGGAGCTGCCCCTCTTCATCCTTGCAAATTGGAGAGGCTTTTCAGGCGGACAAAGGGACCTCTTTGAAGGTATTTTGCAGGCAGGTTCCACCATTGTTGAGAACTTGAGGACTTACAAGCAACCAGCCTTTGTTTACATCCCTATGATGGCGGAACTCCGCGGCGGAGCCTGGGTTGTGGTGGACAGCAAGATCAATCCAGAACAGATTGAGATGTATGCCGAAAGAACTGCCAAGGGAAATGTGCTTGAACCTGAAGGGATGATTGAGATCAAGTTCAGGCCGAAAGAGATTTTGGATTGCATGGGGAGGCTCGATCAAGAGCTGATCTCTCTTAAAACAAAGCTTCAAGAGGCCAAGTTGGGAAGTGCAGGCCGTGAGTCTGTGGATTCCCTTCAGAAGAGTATTTCTGCTCGCGAGAAACAACTCCTGCCTGTTTACACTCAGATAGCTACGAAGTTTGCAGAATTACATGATACTTCTCTGCGAATGGCTGCGAAGGGCGTGGTCAAAGAGGTGGTTGACTGGAAGGGCTCGCGAGCTTTCTTCTATAAGAGATTGAGCAGGAGAGTGTCCGAGCGGTCGCTTATAAAATCGGTGATGGATGCTTCAGGGGAGGAATTGTCAAACCAGTCTGCACTTGAGCTCATCAAGAGTTGGGTCTCGGCTTCTGGGGTGAACTGGGAGGATGATGGAGCTTTCTCTGCTTGGAAAAATGATCCTCTGAACTATGAAAATCATCTGAAACAGCTGAGAGCTAAGAAAATATTTTCTCAGCTCTCCAGCCTTGGAGAATCATCTTCATCTGACCTGGAAGCTCTTAAGCAAGGTCTTCATGTCCTTCTCTCCAAGGTTGAGCCTTCGAGTCGAGCAGAGTTGATAGAGGAATTTCAGAAATTAGCTGGCTGATTAAACTTGATTTGAAATTGAATTTATTTTGGTATGTATGAAATAATTCATTTACAGCAGATAGCCTAGATTCTTGCTGAATGGCTGAAAGTGCTGGGATAGTTCTTCCTTGGCCACCGGG

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
ref	XP_002513881.1	Homomeric Acetyl-CoA Carboxylase (Hom-ACCase)	Ricinus communis	2259	721 bits (1862)	0.0	367/495 (74%)	415/495 (83%), Gaps = 7/495 (1%)	+3

KEGG Pathway	GO
Contig1123[3 Pathway]	Contig1123[48 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Metabolism	Carbohydrate Metabolism	00640	Propanoate metabolism	[PATH:ath00640]	Contig1123	AT1G36160	FPTEVCPM
Metabolism	Carbohydrate Metabolism	00620	Pyruvate metabolism	[PATH:ath00620]	Contig1123	AT1G36160	FPTEVCPM
Metabolism	Lipid Metabolism	00061	Fatty acid biosynthesis	[PATH:ath00061]	Contig1123	AT1G36160	FPTEVCPM

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT1G36160	AT1G36160	acetyl-CoA carboxylase activity	GO:0003989	other enzyme activity
AT1G36160	AT1G36160	acetyl-CoA carboxylase activity	GO:0003989	other enzyme activity
AT1G36160	AT1G36160	fatty acid elongation	GO:0030497	other cellular processes
AT1G36160	AT1G36160	fatty acid elongation	GO:0030497	other metabolic processes
AT1G36160	AT1G36160	response to cytokinin stimulus	GO:0009735	other biological processes
AT1G36160	AT1G36160	embryo development ending in seed dormancy	GO:0009793	developmental processes
AT1G36160	AT1G36160	embryo development ending in seed dormancy	GO:0009793	developmental processes
AT1G36160	AT1G36160	meristem structural organization	GO:0009933	developmental processes
AT1G36160	AT1G36160	primary shoot apical meristem specification	GO:0010072	developmental processes
AT1G36160	AT1G36160	root development	GO:0048364	developmental processes
AT1G36160	AT1G36160	shoot development	GO:0048367	developmental processes
AT1G36160	AT1G36160	plasma membrane	GO:0005886	plasma membrane
AT1G36160	AT1G36160	acetyl-CoA carboxylase activity	GO:0003989	other enzyme activity
AT1G36160	AT1G36160	acetyl-CoA carboxylase activity	GO:0003989	other enzyme activity
AT1G36160	AT1G36160	fatty acid elongation	GO:0030497	other cellular processes
AT1G36160	AT1G36160	fatty acid elongation	GO:0030497	other metabolic processes
AT1G36160	AT1G36160	response to cytokinin stimulus	GO:0009735	other biological processes
AT1G36160	AT1G36160	embryo development ending in seed dormancy	GO:0009793	developmental processes
AT1G36160	AT1G36160	embryo development ending in seed dormancy	GO:0009793	developmental processes
AT1G36160	AT1G36160	meristem structural organization	GO:0009933	developmental processes
AT1G36160	AT1G36160	primary shoot apical meristem specification	GO:0010072	developmental processes
AT1G36160	AT1G36160	root development	GO:0048364	developmental processes
AT1G36160	AT1G36160	shoot development	GO:0048367	developmental processes
AT1G36160	AT1G36160	plasma membrane	GO:0005886	plasma membrane
AT1G36160	AT1G36160	acetyl-CoA carboxylase activity	GO:0003989	other enzyme activity
AT1G36160	AT1G36160	acetyl-CoA carboxylase activity	GO:0003989	other enzyme activity
AT1G36160	AT1G36160	fatty acid elongation	GO:0030497	other cellular processes
AT1G36160	AT1G36160	fatty acid elongation	GO:0030497	other metabolic processes
AT1G36160	AT1G36160	response to cytokinin stimulus	GO:0009735	other biological processes
AT1G36160	AT1G36160	embryo development ending in seed dormancy	GO:0009793	developmental processes
AT1G36160	AT1G36160	embryo development ending in seed dormancy	GO:0009793	developmental processes
AT1G36160	AT1G36160	meristem structural organization	GO:0009933	developmental processes
AT1G36160	AT1G36160	primary shoot apical meristem specification	GO:0010072	developmental processes
AT1G36160	AT1G36160	root development	GO:0048364	developmental processes
AT1G36160	AT1G36160	shoot development	GO:0048367	developmental processes
AT1G36160	AT1G36160	plasma membrane	GO:0005886	plasma membrane
AT1G36160	AT1G36160	acetyl-CoA carboxylase activity	GO:0003989	other enzyme activity
AT1G36160	AT1G36160	acetyl-CoA carboxylase activity	GO:0003989	other enzyme activity
AT1G36160	AT1G36160	fatty acid elongation	GO:0030497	other cellular processes
AT1G36160	AT1G36160	fatty acid elongation	GO:0030497	other metabolic processes
AT1G36160	AT1G36160	response to cytokinin stimulus	GO:0009735	other biological processes
AT1G36160	AT1G36160	embryo development ending in seed dormancy	GO:0009793	developmental processes
AT1G36160	AT1G36160	embryo development ending in seed dormancy	GO:0009793	developmental processes
AT1G36160	AT1G36160	meristem structural organization	GO:0009933	developmental processes
AT1G36160	AT1G36160	primary shoot apical meristem specification	GO:0010072	developmental processes
AT1G36160	AT1G36160	root development	GO:0048364	developmental processes
AT1G36160	AT1G36160	shoot development	GO:0048367	developmental processes
AT1G36160	AT1G36160	plasma membrane	GO:0005886	plasma membrane

Gene Network Informations
Gene Network	Interact with..
Contig1123[interact with..]	Not found!