Contig View

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Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
FPTEVCPM	Contig0774	1003

Contig Map:

(ProjectName=FPTEVCPM SequenceName=Contig0774):
FPTEVCPM007_F02_PDNR-F:
FPTEVCPM027_B03_PDNR-F:

Sequences View:[Contig0774](Contig Seguence)

1003 bases 
GAGCTCAAGCTCTGAAGCTCTGGCAATGGCGTGCTCTCTATCTTTCTTCCTAGCTTCCCCTCGACCGCCATCGCACGACGAGGACGGAGAGGCCACTGCTTCTCGAACGCGCCATCACCATGTTTTACCGTATTCTCGCTCCACGAAACAAGCCGGCCGCTGCCCAATCTCCGGCAACCGGAGCCTGTATCCGCCTTGCTAGCGGAGCAGGAGGTCTCGCCTAAGCGAAGCACGACGCCTCCGCCTTCTCTTCCCTTTCGAGTCGGGCATGGGTTTGACCTCCACCGACTCGAGCTGGGCTATCCGCTGATCATCGGCGGCATTCAAATTCCCCATGATCGCGGATGCGAGGCACACTCCGACGGGGATGTGTTGCTTCATTGCGTGGTCGATGCTATTTTGGGTGCATTGGGGCTTCCGGATATCGGGCAGATTTTCCCTGATAATGATCCTAAATGGAAGGGCGCTGCTTCCTCCGTGTTCATTAAGGAGGCTGTTAGGCTCATGCATGAGGCTGGTTACGAACTCGGAAACTTGGACGCCACCCTTATTCTTCAGAGGCCGAAGCTGAGCCCGCATAAAGAAACAATTAGAACCAATTTATGCGGGTTGTTGGGCGCTGATCCTTCAGTCGTTAATCTCAAAGCAAAGACCCATGAGCACGTGGACAGTCTCGGCGAGAACCGTAGCATTGCAGCTCACACCGTGGTGCTTCTCATGAGAAAATAACGGTCAGAATTTTCGTCCCCTAATCTGTTTATTCTGCAACAAATAAATATATTGCATCTTTACCTTGTGCATTGGTTAAACTTCTAAATGTGCATATTATTTAATGATACATGTGTCATTAAGATTCGTCAAAATATCAATGACAGTGAGGTTTACTTTAATCATCATGATCAAATTTGTATTTTAATCTCTTTGCAGACAAATTAAAGTCTTTTTTTATGCGGATAACAGGCTTTTAAATTTGTTTAGAAAAAAAAAAAAAAAAAAAAAAAAA

Sequences View:[Contig0774](Singleton Sequence)

Contig0774 1003  bases 
GAGCTCAAGCTCTGAAGCTCTGGCAATGGCGTGCTCTCTATCTTTCTTCCTAGCTTCCCCTCGACCGCCATCGCACGACGAGGACGGAGAGGCCACTGCTTCTCGAACGCGCCATCACCATGTTTTACCGTATTCTCGCTCCACGAAACAAGCCGGCCGCTGCCCAATCTCCGGCAACCGGAGCCTGTATCCGCCTTGCTAGCGGAGCAGGAGGTCTCGCCTAAGCGAAGCACGACGCCTCCGCCTTCTCTTCCCTTTCGAGTCGGGCATGGGTTTGACCTCCACCGACTCGAGCTGGGCTATCCGCTGATCATCGGCGGCATTCAAATTCCCCATGATCGCGGATGCGAGGCACACTCCGACGGGGATGTGTTGCTTCATTGCGTGGTCGATGCTATTTTGGGTGCATTGGGGCTTCCGGATATCGGGCAGATTTTCCCTGATAATGATCCTAAATGGAAGGGCGCTGCTTCCTCCGTGTTCATTAAGGAGGCTGTTAGGCTCATGCATGAGGCTGGTTACGAACTCGGAAACTTGGACGCCACCCTTATTCTTCAGAGGCCGAAGCTGAGCCCGCATAAAGAAACAATTAGAACCAATTTATGCGGGTTGTTGGGCGCTGATCCTTCAGTCGTTAATCTCAAAGCAAAGACCCATGAGCACGTGGACAGTCTCGGCGAGAACCGTAGCATTGCAGCTCACACCGTGGTGCTTCTCATGAGAAAATAACGGTCAGAATTTTCGTCCCCTAATCTGTTTATTCTGCAACAAATAAATATATTGCATCTTTACCTTGTGCATTGGTTAAACTTCTAAATGTGCATATTATTTAATGATACATGTGTCATTAAGATTCGTCAAAATATCAATGACAGTGAGGTTTACTTTAATCATCATGATCAAATTTGTATTTTAATCTCTTTGCAGACAAATTAAAGTCTTTTTTTATGCGGATAACAGGCTTTTAAATTTGTTTAGAAAAAAAAAAAAAAAAAAAAAAAAA

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
ref	NP_001047741.1	Os02g0680600	Oryza sativa (japonica cultivar-group)	275	314 bits (805)	8e-84	164/231 (70%)	183/231 (79%), Gaps = 1/231 (0%)	+1

KEGG Pathway	GO
Contig0774[1 Pathway]	Contig0774[42 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Metabolism	Metabolism of Terpenoids and Polyketides	00900	Terpenoid backbone biosynthesis	[PATH:ath00900]	Contig0774	AT1G63970	FPTEVCPM

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT1G63970	AT1G63970	chloroplast	GO:0009507	chloroplast
AT1G63970	AT1G63970	chloroplast stroma	GO:0009570	plastid
AT1G63970	AT1G63970	chloroplast stroma	GO:0009570	chloroplast
AT1G63970	AT1G63970	chloroplast stroma	GO:0009570	other cytoplasmic components
AT1G63970	AT1G63970	chloroplast stroma	GO:0009570	other intracellular components
AT1G63970	AT1G63970	"2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity"	GO:0008685	other enzyme activity
AT1G63970	AT1G63970	"2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity"	GO:0008685	other enzyme activity
AT1G63970	AT1G63970	carotenoid biosynthetic process	GO:0016117	other cellular processes
AT1G63970	AT1G63970	carotenoid biosynthetic process	GO:0016117	other metabolic processes
AT1G63970	AT1G63970	chlorophyll biosynthetic process	GO:0015995	other cellular processes
AT1G63970	AT1G63970	chlorophyll biosynthetic process	GO:0015995	other metabolic processes
AT1G63970	AT1G63970	"isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway"	GO:0019288	other cellular processes
AT1G63970	AT1G63970	"isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway"	GO:0019288	other metabolic processes
AT1G63970	AT1G63970	chloroplast	GO:0009507	chloroplast
AT1G63970	AT1G63970	chloroplast	GO:0009507	chloroplast
AT1G63970	AT1G63970	chloroplast stroma	GO:0009570	plastid
AT1G63970	AT1G63970	chloroplast stroma	GO:0009570	chloroplast
AT1G63970	AT1G63970	chloroplast stroma	GO:0009570	other cytoplasmic components
AT1G63970	AT1G63970	chloroplast stroma	GO:0009570	other intracellular components
AT1G63970	AT1G63970	"2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity"	GO:0008685	other enzyme activity
AT1G63970	AT1G63970	"2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity"	GO:0008685	other enzyme activity
AT1G63970	AT1G63970	carotenoid biosynthetic process	GO:0016117	other cellular processes
AT1G63970	AT1G63970	carotenoid biosynthetic process	GO:0016117	other metabolic processes
AT1G63970	AT1G63970	chlorophyll biosynthetic process	GO:0015995	other cellular processes
AT1G63970	AT1G63970	chlorophyll biosynthetic process	GO:0015995	other metabolic processes
AT1G63970	AT1G63970	"isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway"	GO:0019288	other cellular processes
AT1G63970	AT1G63970	"isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway"	GO:0019288	other metabolic processes
AT1G63970	AT1G63970	chloroplast	GO:0009507	chloroplast
AT1G63970	AT1G63970	chloroplast	GO:0009507	chloroplast
AT1G63970	AT1G63970	chloroplast stroma	GO:0009570	plastid
AT1G63970	AT1G63970	chloroplast stroma	GO:0009570	chloroplast
AT1G63970	AT1G63970	chloroplast stroma	GO:0009570	other cytoplasmic components
AT1G63970	AT1G63970	chloroplast stroma	GO:0009570	other intracellular components
AT1G63970	AT1G63970	"2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity"	GO:0008685	other enzyme activity
AT1G63970	AT1G63970	"2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity"	GO:0008685	other enzyme activity
AT1G63970	AT1G63970	carotenoid biosynthetic process	GO:0016117	other cellular processes
AT1G63970	AT1G63970	carotenoid biosynthetic process	GO:0016117	other metabolic processes
AT1G63970	AT1G63970	chlorophyll biosynthetic process	GO:0015995	other cellular processes
AT1G63970	AT1G63970	chlorophyll biosynthetic process	GO:0015995	other metabolic processes
AT1G63970	AT1G63970	"isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway"	GO:0019288	other cellular processes
AT1G63970	AT1G63970	"isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway"	GO:0019288	other metabolic processes
AT1G63970	AT1G63970	chloroplast	GO:0009507	chloroplast

Gene Network Informations
Gene Network	Interact with..
Contig0774[interact with..]	Not found!