Contig View

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Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
FPTEVCPM	Contig0349	1524

Contig Map:

(ProjectName=FPTEVCPM SequenceName=Contig0349):
FPTEVCPM001_D12_pDNR-F:
FPTEVCPM056_C08_PDNR-F:
FPTEVCPM059_H01_PDNR-F:
FPTEVCPM053_F12_PDNR-F:
FPTEVCPM051_F12_PDNR-F:
FPTEVCPM073_A06_PDNR-F:
FPTEVCPM028_E03_PDNR-F:
FPTEVCPM040_D10_PDNR-F:
FPTEVCPM071_C06_PDNR-F:
FPTEVCPM049_H04_PDNR-F:
FPTEVCPM065_B11_PDNR-F:
FPTEVCPM041_C08_pDNR-F:
FPTEVCPM083_A03_PDNR-F:

Sequences View:[Contig0349](Contig Seguence)

1524 bases 
TCATCAACTATCATGACGCGCTCATGCCTTACCTGTCACGGATCAATTCAACCTCGAGCAAAATATACGCCACCCGAACACTCTACTTCCTCAGAGACGACGACACTCTGAAGCCAGTTGCCGTCGAGCTCAGCCTCCCGCATCCTGAAGGCGAGCGGCACGGCGCTGTAAGCACCGTCTACACGCCAGCAGATTCCGGCATCGAGGCTGCAATCTGGCATCTAGCCAAGGGGTTTGTTGCCGTCAATGACTATGGAGTACACCAGCTTATCAGCCACTGGCTGCGCACCCACGCAATCATGGAGCCTTTTGTGATCTCAACGCACAGGCATCTCAGCGCTCTTCATCCACTTAACAAGCTCCTCGTACCACACTACCGCGACACCATGAACATAAACGCCCTTGCTCGTCAGTCCCTCGTCAACGCCGGCGGTATCATCGAGCTCTCCGTCTTCCCTGCAAAATACGCCATGGAGCTGTCGTCCGTTCTCTACAAAAACTGGAACTTTGCCGAGCAATCACTCCCCGCCGATCTTATCAAGCGGGGAATAGCAGTGGAGGATCCATCGAGTCCGACTAAGCTAAATCTCTTGATCAAAGACTACCCCTACGCCGTCGACGGTCTCGCCATCTGGTCTGCCATCGAGTCTTGGGTTGAAGAGTACTGCTCCATCTACTACCCAGACAACTCCAGCGTCCTTAACGACAACGAACTCCAAACCTGGTGGAAAGAAGCCGTTGAAGTCGGACATGGCGACCTCAAACACAAGCCATGGTGGCCGCAGCTCGACTCCCTACCCTCACTCGTCCGCATCTGCTCCACCATAATCTGGATAGCTTCCGCCATGCACGCCGCCGTGAACTTCGGTCAGTATCCCTACGGCGGCTACCTCCCCAACCGTCCGAGCTTGACCCGACGGTTCATGCCGGAGGCCGGCACGGCGGACTACGAGCTCCTTAAAACGAACCCGGATAAAGTGTTCTTAAAGACGATCACGGGGCAGTTGCAGGCCATTCTGGAGATATCGGTGATCGAGATCCTGTCGACGCACGCATCGGATGAGTTATATTTGGGCCAGAGAGCGAGCGAGGAGTGGACCAGCAATGAGAAGGCGCTGAAGGCTCTGAAGCGGTTTGGTTCGAAGCTGAAGGAGGTGGAGGAGAAGATAGCAGAGCTGAATGATGATAAGAAATTGAAGAACCGTGGCGGGTCGAAGAAGTTGGAGTACACGTTGCTTTCGCCTTATAGCGAGCAGGGGCTCACTGCCAAGGGGATTCCTAACAGTATCTCCATTTGATCGATTTGAGGAAAGAAGATGAAGAAGACGAAGTAGCCATGAGTGATGTACTAAGCTTTGTTTTTCCGGTGGGGGGAATAAAATGTTCTGCAGAGTTGGGCAAGTGATAAATTTGCCATGTTTCTGTATCAATAAAATTATATAAATAAGATCGTGAATATTTCGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Sequences View:[Contig0349](Singleton Sequence)

Contig0349 1524  bases 
TCATCAACTATCATGACGCGCTCATGCCTTACCTGTCACGGATCAATTCAACCTCGAGCAAAATATACGCCACCCGAACACTCTACTTCCTCAGAGACGACGACACTCTGAAGCCAGTTGCCGTCGAGCTCAGCCTCCCGCATCCTGAAGGCGAGCGGCACGGCGCTGTAAGCACCGTCTACACGCCAGCAGATTCCGGCATCGAGGCTGCAATCTGGCATCTAGCCAAGGGGTTTGTTGCCGTCAATGACTATGGAGTACACCAGCTTATCAGCCACTGGCTGCGCACCCACGCAATCATGGAGCCTTTTGTGATCTCAACGCACAGGCATCTCAGCGCTCTTCATCCACTTAACAAGCTCCTCGTACCACACTACCGCGACACCATGAACATAAACGCCCTTGCTCGTCAGTCCCTCGTCAACGCCGGCGGTATCATCGAGCTCTCCGTCTTCCCTGCAAAATACGCCATGGAGCTGTCGTCCGTTCTCTACAAAAACTGGAACTTTGCCGAGCAATCACTCCCCGCCGATCTTATCAAGCGGGGAATAGCAGTGGAGGATCCATCGAGTCCGACTAAGCTAAATCTCTTGATCAAAGACTACCCCTACGCCGTCGACGGTCTCGCCATCTGGTCTGCCATCGAGTCTTGGGTTGAAGAGTACTGCTCCATCTACTACCCAGACAACTCCAGCGTCCTTAACGACAACGAACTCCAAACCTGGTGGAAAGAAGCCGTTGAAGTCGGACATGGCGACCTCAAACACAAGCCATGGTGGCCGCAGCTCGACTCCCTACCCTCACTCGTCCGCATCTGCTCCACCATAATCTGGATAGCTTCCGCCATGCACGCCGCCGTGAACTTCGGTCAGTATCCCTACGGCGGCTACCTCCCCAACCGTCCGAGCTTGACCCGACGGTTCATGCCGGAGGCCGGCACGGCGGACTACGAGCTCCTTAAAACGAACCCGGATAAAGTGTTCTTAAAGACGATCACGGGGCAGTTGCAGGCCATTCTGGAGATATCGGTGATCGAGATCCTGTCGACGCACGCATCGGATGAGTTATATTTGGGCCAGAGAGCGAGCGAGGAGTGGACCAGCAATGAGAAGGCGCTGAAGGCTCTGAAGCGGTTTGGTTCGAAGCTGAAGGAGGTGGAGGAGAAGATAGCAGAGCTGAATGATGATAAGAAATTGAAGAACCGTGGCGGGTCGAAGAAGTTGGAGTACACGTTGCTTTCGCCTTATAGCGAGCAGGGGCTCACTGCCAAGGGGATTCCTAACAGTATCTCCATTTGATCGATTTGAGGAAAGAAGATGAAGAAGACGAAGTAGCCATGAGTGATGTACTAAGCTTTGTTTTTCCGGTGGGGGGAATAAAATGTTCTGCAGAGTTGGGCAAGTGATAAATTTGCCATGTTTCTGTATCAATAAAATTATATAAATAAGATCGTGAATATTTCGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
gb	AAB67865.1	lipoxygenase	Solanum tuberosum	862	624 bits (1608)	e-176	291/427 (68%)	353/427 (82%)	+3

KEGG Pathway	GO
Contig0349[1 Pathway]	Contig0349[32 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Metabolism	Lipid Metabolism	00592	alpha-Linolenic acid metabolism	[PATH:ath00592]	Contig0349	AT1G55020	FPTEVCPM

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT1G55020	AT1G55020	cellular_component	GO:0005575	unknown cellular components
AT1G55020	AT1G55020	lipoxygenase activity	GO:0016165	other enzyme activity
AT1G55020	AT1G55020	lipoxygenase activity	GO:0016165	other enzyme activity
AT1G55020	AT1G55020	defense response	GO:0006952	response to stress
AT1G55020	AT1G55020	jasmonic acid biosynthetic process	GO:0009695	response to stress
AT1G55020	AT1G55020	jasmonic acid biosynthetic process	GO:0009695	other cellular processes
AT1G55020	AT1G55020	jasmonic acid biosynthetic process	GO:0009695	other metabolic processes
AT1G55020	AT1G55020	jasmonic acid biosynthetic process	GO:0009695	response to abiotic or biotic stimulus
AT1G55020	AT1G55020	response to wounding	GO:0009611	response to stress
AT1G55020	AT1G55020	"defense response to bacterium, incompatible interaction"	GO:0009816	response to stress
AT1G55020	AT1G55020	"defense response to bacterium, incompatible interaction"	GO:0009816	response to abiotic or biotic stimulus
AT1G55020	AT1G55020	membrane disassembly	GO:0030397	cell organization and biogenesis
AT1G55020	AT1G55020	growth	GO:0040007	other biological processes
AT1G55020	AT1G55020	response to abscisic acid stimulus	GO:0009737	other biological processes
AT1G55020	AT1G55020	response to jasmonic acid stimulus	GO:0009753	other biological processes
AT1G55020	AT1G55020	root development	GO:0048364	developmental processes
AT1G55020	AT1G55020	cellular_component	GO:0005575	unknown cellular components
AT1G55020	AT1G55020	lipoxygenase activity	GO:0016165	other enzyme activity
AT1G55020	AT1G55020	lipoxygenase activity	GO:0016165	other enzyme activity
AT1G55020	AT1G55020	defense response	GO:0006952	response to stress
AT1G55020	AT1G55020	jasmonic acid biosynthetic process	GO:0009695	response to stress
AT1G55020	AT1G55020	jasmonic acid biosynthetic process	GO:0009695	other cellular processes
AT1G55020	AT1G55020	jasmonic acid biosynthetic process	GO:0009695	other metabolic processes
AT1G55020	AT1G55020	jasmonic acid biosynthetic process	GO:0009695	response to abiotic or biotic stimulus
AT1G55020	AT1G55020	response to wounding	GO:0009611	response to stress
AT1G55020	AT1G55020	"defense response to bacterium, incompatible interaction"	GO:0009816	response to stress
AT1G55020	AT1G55020	"defense response to bacterium, incompatible interaction"	GO:0009816	response to abiotic or biotic stimulus
AT1G55020	AT1G55020	membrane disassembly	GO:0030397	cell organization and biogenesis
AT1G55020	AT1G55020	growth	GO:0040007	other biological processes
AT1G55020	AT1G55020	response to abscisic acid stimulus	GO:0009737	other biological processes
AT1G55020	AT1G55020	response to jasmonic acid stimulus	GO:0009753	other biological processes
AT1G55020	AT1G55020	root development	GO:0048364	developmental processes

Gene Network Informations
Gene Network	Interact with..
Contig0349[interact with..]	Not found!