Contig View

Back [Phalaenopsis Transcriptome]

Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
FPEAECP	FPEAECP014_C02_PDNR-F	1074

Contig Map:

(ProjectName=FPEAECP
SequenceName=NoContigFind):

Sequences View:[NoContigFind](Contig Seguence)

Sequences View:[FPEAECP014_C02_PDNR-F](Singleton Sequence)

FPEAECP014_C02_PDNR-F 1074  bases 
GACTCCGCCTATGCCCGGGATTCGGCATTACGGCCGGGGGTAGAGGAAAAGAAGCTCGCGAGCAGCAGAGGGAGAGAGAGGGCGACAATGTCATCTCTTGGGCCAATCAACCATCTGCTCCCCTCAACTTCATCAGCGATAAGGACCCAAAAATTATCCCAATTTCTCCCTGAAAACTTTCCCAAAGCCCTTGTAGCTATTCGGTCTCTTTCCCTTCACGCTCGTCCTGCTGACTTTGTCCGGAGGAGAAATCTTCGGTCTACGAATGTGGTCACCGCCGTCAATCGGCACCTTATGGGATCAGTGACGAACGCTAAAGGACTCCGCTTTGCTGTGGTTGTAGCACAGTTTAATGAGATCATCACAAATCCATTATTGGAAGGAGCTCTACAGACTTTTAAACAATATTCAGTCAAAGAAGAAGACATTACAGTCGTCAGAGTTCCAGGTAGTTTTGAGATTCCTGTTGTTGCACAAAAACTTGGAAAATCGGAATCTTATGATGCAATTTTATGCATAGGAGCTGTGATAAGAGGTGATACCACTCATTATGATGCTGTTGCAAATTCAGCAGCATCTGGTGTGCTCAATGCTGGGTTGAGTTCAGGAGTTCCTTGTATTTTCGGTGTTCTTACCTGTGATAGCATGGAACAGGCCATTAACCGTGCTGGAGGCAAATCTGGAAATAAGGGTTCAGAGGCTGCCTTATCTGCAATTGAGATGGCAACACTTTTTGAGCACCACCTGAAGAAATAAAATACATAAAATTTGGCTTCTCAACTCTGTTTTTACGAGGACTATTTATTCAACAATTGCAAGGTTTTCTTCTCTATTGCTCTTCGCTCTTTGTAGCAACCAGATTTTTGTAGCTTTGGTTCTCTCAAGTTCTATGCTTAATTTTTTTCCTAAGGGTTGGCTTGTGAATTATCAATTTTCATGATGAAAGGTCATTGCAAGTGTTATTGAATTTAGAACTTGTCTTCATATTTATTATGAATCCATGAGTATAGGTTTCCTCCTGTTCTTTGCCTGATGTTGGCCTGATCCATCTGTTTTTGGATGCAGACGACCCTG

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
emb	CAO46380.1	unnamed protein product	Vitis vinifera	185	260 bits (665)	2e-67	131/164 (79%)	150/164 (91%)	+1

KEGG Pathway	GO
NoContigFind[1 Pathway]	NoContigFind[26 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Metabolism	Metabo lism of Cofactors and Vitamins	00740	Riboflavin metabolism	[PATH:ath00740]	FPEAECP014_C02_PDNR-F	AT2G44050	FPEAECP

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT2G44050	AT2G44050	chloroplast	GO:0009507	chloroplast
AT2G44050	AT2G44050	chloroplast	GO:0009507	chloroplast
AT2G44050	AT2G44050	chloroplast stroma	GO:0009570	plastid
AT2G44050	AT2G44050	chloroplast stroma	GO:0009570	chloroplast
AT2G44050	AT2G44050	chloroplast stroma	GO:0009570	other cytoplasmic components
AT2G44050	AT2G44050	chloroplast stroma	GO:0009570	other intracellular components
AT2G44050	AT2G44050	riboflavin biosynthetic process	GO:0009231	other cellular processes
AT2G44050	AT2G44050	riboflavin biosynthetic process	GO:0009231	other metabolic processes
AT2G44050	AT2G44050	riboflavin biosynthetic process	GO:0009231	other cellular processes
AT2G44050	AT2G44050	riboflavin biosynthetic process	GO:0009231	other metabolic processes
AT2G44050	AT2G44050	jasmonic acid mediated signaling pathway	GO:0009867	other biological processes
AT2G44050	AT2G44050	"6,7-dimethyl-8-ribityllumazine synthase activity"	GO:0000906	other enzyme activity
AT2G44050	AT2G44050	"6,7-dimethyl-8-ribityllumazine synthase activity"	GO:0000906	other enzyme activity
AT2G44050	AT2G44050	chloroplast	GO:0009507	chloroplast
AT2G44050	AT2G44050	chloroplast	GO:0009507	chloroplast
AT2G44050	AT2G44050	chloroplast stroma	GO:0009570	plastid
AT2G44050	AT2G44050	chloroplast stroma	GO:0009570	chloroplast
AT2G44050	AT2G44050	chloroplast stroma	GO:0009570	other cytoplasmic components
AT2G44050	AT2G44050	chloroplast stroma	GO:0009570	other intracellular components
AT2G44050	AT2G44050	riboflavin biosynthetic process	GO:0009231	other cellular processes
AT2G44050	AT2G44050	riboflavin biosynthetic process	GO:0009231	other metabolic processes
AT2G44050	AT2G44050	riboflavin biosynthetic process	GO:0009231	other cellular processes
AT2G44050	AT2G44050	riboflavin biosynthetic process	GO:0009231	other metabolic processes
AT2G44050	AT2G44050	jasmonic acid mediated signaling pathway	GO:0009867	other biological processes
AT2G44050	AT2G44050	"6,7-dimethyl-8-ribityllumazine synthase activity"	GO:0000906	other enzyme activity
AT2G44050	AT2G44050	"6,7-dimethyl-8-ribityllumazine synthase activity"	GO:0000906	other enzyme activity

Gene Network Informations
Gene Network	Interact with..
FPEAECP014_C02_PDNR-F[interact with..]	Not found!