Contig View

Back [Phalaenopsis Transcriptome]

Library Name: Contig Lists:

Contig Information:

Project Name	Query Name	Length of query
FEVCP	FEVCPM014_C07_PDNR-F	984

Contig Map:

(ProjectName=FEVCP
SequenceName=NoContigFind):

Sequences View:[NoContigFind](Contig Seguence)

Sequences View:[FEVCPM014_C07_PDNR-F](Singleton Sequence)

FEVCPM014_C07_PDNR-F 984  bases 
GGGACCTACACATTGTGGATCATTTGATGTAACTTACATGGCATGTTTGCCGAATATGATAGTGATGGCTCCTTCTGATGAGGCAGAACTGTTTCACATGGTGGCCACAGCAGCAGCTATTAATGACCGACCATCGTGTTTCCGATATCCAAGGGGAGATGGCATTGGAATTCCTCTGCCACCAGGAAACAAAGGTGTGCCGATTGAGGTTGGTAAAGGTAGGATTTTGAGGGAGGGTGAGGCTGTAGCTCTTCTAGGATATGGAACAGCAGTTCAAAGTTGTTTAGCTGCTGCTCGTCTTGTGGAACACCATGGCCTAAAGCTAACCGTAGCAGATGCCCGCTTCTGCAAACCGCTGGACCAAGCTCTGATTCGCAGCCTCGCAAAATCACACCAGGTTTTGATAACAGTTGAAGAAGGATCAATTGGTGGCTTTGGCTCACATGTTGCTCAGTTCATGGCTCTTGACGGCCTTCTGGATGGCACAACAAAGTGGAGGCCATTGGTTCTTCCGGATCGATATATAGAGCATGGATCGCCTGGTGATCAATTGTGTGAGGCAGGTCTGACACCCTCCCATATTGCTGCTACTGCACTTAATGTTGCTGGGAAGAAAATGGAGGCTTTGGAAATCATGTCATATCAATTAAACAAGTCATCTTCAAAGAACACAGTTTGAGAAAGATGTATGTCTCAGGATTTCTTATTGATAGATTTTGGATGCCAAAGCTTTGACATTTTTGTTGGAGTGAGGTGAGTGATTATTGACGAATTGGTTATCATCTGCATGACAATGATAATCAATGCTTGGCAATCATTGAATTGAATTTACCTCTCCTTGGAGCGATATGAATATTTCCTACATCGTTTTTTGCTTTTTAATTTTCTTAAAATTTTAGATAAAACTGCCCTAATTATTTGTATGAGGTTTTTTAGTCTCGAGTTTATAAAAGTGTTAAAGCAAAAAAAAAAAAAAAAAAAAAA

Contig Annotation:

GenBank	Accession number (Best hits in the GenBank)	Annotation	Species	Length of homologous protein(Amino Acid)	Score	Expect value	Identities	similarity	Frame
gb	AAS99588.1	chloroplast 1-deoxy-D-xylulose-5-phosphate synthase	Elaeis guineensis	707	374 bits (961)	e-102	179/213 (84%)	194/213 (91%)	+2

KEGG Pathway	GO
NoContigFind[1 Pathway]	NoContigFind[18 GoTerm]

Pathway Informations
First-level terms	Second-level terms	KEGG pathway Num	KEGG pathway Name	KEGG pathway Description	contig Name	locusName	project Name
Metabolism	Metabolism of Terpenoids and Polyketides	00900	Terpenoid backbone biosynthesis	[PATH:ath00900]	FEVCPM014_C07_PDNR-F	AT4G15560	FEVCP

GO Informations
Locus Name	Go Name	Go Class Descriptions	GO id	Anotations01
AT4G15560	AT4G15560	chloroplast	GO:0009507	chloroplast
AT4G15560	AT4G15560	1-deoxy-D-xylulose-5-phosphate synthase activity	GO:0008661	transferase activity
AT4G15560	AT4G15560	chlorophyll biosynthetic process	GO:0015995	other cellular processes
AT4G15560	AT4G15560	chlorophyll biosynthetic process	GO:0015995	other metabolic processes
AT4G15560	AT4G15560	"isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway"	GO:0019288	other cellular processes
AT4G15560	AT4G15560	"isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway"	GO:0019288	other metabolic processes
AT4G15560	AT4G15560	chloroplast	GO:0009507	chloroplast
AT4G15560	AT4G15560	1-deoxy-D-xylulose-5-phosphate synthase activity	GO:0008661	transferase activity
AT4G15560	AT4G15560	chlorophyll biosynthetic process	GO:0015995	other cellular processes
AT4G15560	AT4G15560	chlorophyll biosynthetic process	GO:0015995	other metabolic processes
AT4G15560	AT4G15560	"isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway"	GO:0019288	other cellular processes
AT4G15560	AT4G15560	"isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway"	GO:0019288	other metabolic processes
AT4G15560	AT4G15560	chloroplast	GO:0009507	chloroplast
AT4G15560	AT4G15560	1-deoxy-D-xylulose-5-phosphate synthase activity	GO:0008661	transferase activity
AT4G15560	AT4G15560	chlorophyll biosynthetic process	GO:0015995	other cellular processes
AT4G15560	AT4G15560	chlorophyll biosynthetic process	GO:0015995	other metabolic processes
AT4G15560	AT4G15560	"isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway"	GO:0019288	other cellular processes
AT4G15560	AT4G15560	"isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway"	GO:0019288	other metabolic processes

Gene Network Informations
Gene Network	Interact with..
FEVCPM014_C07_PDNR-F[interact with..]	Not found!